Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_D16
         (357 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        23   0.82 
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   1.1  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   1.4  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    22   1.9  
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    21   3.3  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    21   3.3  
AY739658-1|AAU85297.1|  664|Apis mellifera hyperpolarization-act...    21   4.4  
AY280848-1|AAQ16312.1|  632|Apis mellifera hyperpolarization-act...    21   4.4  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   5.8  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   5.8  

>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 23.4 bits (48), Expect = 0.82
 Identities = 11/43 (25%), Positives = 22/43 (51%)
 Frame = -3

Query: 238 ILSAVQVVLAIRQNLRLNYWHDTPDSGRWRRSEPTHWHSPRWL 110
           ++  V ++LA    L L +   TPD+ +  R    +W+ P ++
Sbjct: 11  MMIGVLLMLAPINALLLGFVQSTPDNNKTVREFNVYWNVPTFM 53


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.0 bits (47), Expect = 1.1
 Identities = 7/26 (26%), Positives = 16/26 (61%)
 Frame = -3

Query: 91  GRSSIRNATWQSGSRPSCTERNAGPS 14
           GR+ ++  +++  S P C+ +N  P+
Sbjct: 878 GRAILKIPSYKPASTPGCSSKNGEPT 903


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 22.6 bits (46), Expect = 1.4
 Identities = 7/15 (46%), Positives = 13/15 (86%)
 Frame = +3

Query: 78  IEDRPQHSIVPSHLG 122
           +ED PQ+S++P+ +G
Sbjct: 393 LEDAPQNSLLPNFVG 407


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 22.2 bits (45), Expect = 1.9
 Identities = 6/17 (35%), Positives = 13/17 (76%)
 Frame = +3

Query: 279 ATTMSNLREPFSNLIWL 329
           ++T+ +  +PFSN +W+
Sbjct: 554 SSTLVSFLQPFSNTLWI 570


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 21.4 bits (43), Expect = 3.3
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -2

Query: 224 PSRARHQAKPQAQ 186
           P+R R +AKP+A+
Sbjct: 28  PTRLRREAKPEAE 40


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 21.4 bits (43), Expect = 3.3
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -2

Query: 224 PSRARHQAKPQAQ 186
           P+R R +AKP+A+
Sbjct: 29  PARLRREAKPEAE 41


>AY739658-1|AAU85297.1|  664|Apis mellifera
           hyperpolarization-activated ion channelvariant L
           protein.
          Length = 664

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 213 STTWTALRM*QKSYWL 260
           S +W A+   Q S+WL
Sbjct: 308 SNSWVAINELQDSFWL 323


>AY280848-1|AAQ16312.1|  632|Apis mellifera
           hyperpolarization-activated ion channel protein.
          Length = 632

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 213 STTWTALRM*QKSYWL 260
           S +W A+   Q S+WL
Sbjct: 276 SNSWVAINELQDSFWL 291


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 20.6 bits (41), Expect = 5.8
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +2

Query: 233 QNVTEVVLAAVYKALSDHHV 292
           Q+   V+   VY+ L  HH+
Sbjct: 148 QDTQSVIFPPVYEILPQHHL 167


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 20.6 bits (41), Expect = 5.8
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -3

Query: 64  WQSGSRPSCTERN 26
           W SG R S  +RN
Sbjct: 270 WDSGRRKSAAQRN 282


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,043
Number of Sequences: 438
Number of extensions: 2225
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8308335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)