Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0006_D13
(482 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L04490-1|AAA36350.1| 375|Homo sapiens NADH dehydrogenase (ubiqu... 62 1e-09
BC111546-1|AAI11547.1| 377|Homo sapiens NADH dehydrogenase (ubi... 62 1e-09
BC015837-1|AAH15837.1| 377|Homo sapiens NADH dehydrogenase (ubi... 62 1e-09
BC009311-1|AAH09311.1| 377|Homo sapiens NADH dehydrogenase (ubi... 62 1e-09
BC003351-1|AAH03351.1| 338|Homo sapiens Similar to NADH dehydro... 62 1e-09
AF050641-1|AAD42055.1| 377|Homo sapiens NADH-ubiquinone oxidore... 62 1e-09
BC103928-1|AAI03929.1| 810|Homo sapiens protocadherin gamma sub... 30 3.7
BC103927-1|AAI03928.1| 810|Homo sapiens protocadherin gamma sub... 30 3.7
BC103926-1|AAI03927.1| 810|Homo sapiens protocadherin gamma sub... 30 3.7
AF152517-1|AAD43777.1| 810|Homo sapiens protocadherin gamma B1 ... 30 3.7
AF152330-1|AAD43724.1| 927|Homo sapiens protocadherin gamma B1 ... 30 3.7
>L04490-1|AAA36350.1| 375|Homo sapiens NADH dehydrogenase
(ubiquinone) protein.
Length = 375
Score = 62.1 bits (144), Expect = 1e-09
Identities = 41/117 (35%), Positives = 65/117 (55%), Gaps = 1/117 (0%)
Frame = +3
Query: 132 MPLYKNGMATVKQPVFVSDVAQAIVNAARDPDTKCQLYQALGPKRYLLADLVDWFYKLMR 311
+PL G TVKQPV+V DV++ IVNA +DPD + + +GP RYLL LV + + +
Sbjct: 224 IPLGSLGWKTVKQPVYVVDVSKGIVNAVKDPDANGKSFAFVGPSRYLLFHLVKYIFAVAH 283
Query: 312 KDEKWGYYRYDMKYDPVFPIK-VALINLISPAYPLGNLHWEGIEKESTTDVPLPGVP 479
+ + + + P+F + VA + ISP P + + +E+ TD+ LP +P
Sbjct: 284 R----LFLPFPL---PLFAYRWVARVFEISPFEPW--ITRDKVERMHITDMKLPHLP 331
Score = 48.0 bits (109), Expect = 2e-05
Identities = 21/38 (55%), Positives = 28/38 (73%)
Frame = +2
Query: 5 LGECAVKEEFPTATIIKASDIYGSEDRFLRSFATNWRY 118
+GE V++ FP A I+K SDI+G EDRFL SFA+ R+
Sbjct: 184 VGEKVVRDAFPEAIIVKPSDIFGREDRFLNSFASMHRF 221
>BC111546-1|AAI11547.1| 377|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 9, 39kDa protein.
Length = 377
Score = 62.1 bits (144), Expect = 1e-09
Identities = 41/117 (35%), Positives = 65/117 (55%), Gaps = 1/117 (0%)
Frame = +3
Query: 132 MPLYKNGMATVKQPVFVSDVAQAIVNAARDPDTKCQLYQALGPKRYLLADLVDWFYKLMR 311
+PL G TVKQPV+V DV++ IVNA +DPD + + +GP RYLL LV + + +
Sbjct: 226 IPLGSLGWKTVKQPVYVVDVSKGIVNAVKDPDANGKSFAFVGPSRYLLFHLVKYIFAVAH 285
Query: 312 KDEKWGYYRYDMKYDPVFPIK-VALINLISPAYPLGNLHWEGIEKESTTDVPLPGVP 479
+ + + + P+F + VA + ISP P + + +E+ TD+ LP +P
Sbjct: 286 R----LFLPFPL---PLFAYRWVARVFEISPFEPW--ITRDKVERMHITDMKLPHLP 333
Score = 48.0 bits (109), Expect = 2e-05
Identities = 21/38 (55%), Positives = 28/38 (73%)
Frame = +2
Query: 5 LGECAVKEEFPTATIIKASDIYGSEDRFLRSFATNWRY 118
+GE V++ FP A I+K SDI+G EDRFL SFA+ R+
Sbjct: 186 VGEKVVRDAFPEAIIVKPSDIFGREDRFLNSFASMHRF 223
>BC015837-1|AAH15837.1| 377|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 9, 39kDa protein.
Length = 377
Score = 62.1 bits (144), Expect = 1e-09
Identities = 41/117 (35%), Positives = 65/117 (55%), Gaps = 1/117 (0%)
Frame = +3
Query: 132 MPLYKNGMATVKQPVFVSDVAQAIVNAARDPDTKCQLYQALGPKRYLLADLVDWFYKLMR 311
+PL G TVKQPV+V DV++ IVNA +DPD + + +GP RYLL LV + + +
Sbjct: 226 IPLGSLGWKTVKQPVYVVDVSKGIVNAVKDPDANGKSFAFVGPSRYLLFHLVKYIFAVAH 285
Query: 312 KDEKWGYYRYDMKYDPVFPIK-VALINLISPAYPLGNLHWEGIEKESTTDVPLPGVP 479
+ + + + P+F + VA + ISP P + + +E+ TD+ LP +P
Sbjct: 286 R----LFLPFPL---PLFAYRWVARVFEISPFEPW--ITRDKVERMHITDMKLPHLP 333
Score = 48.0 bits (109), Expect = 2e-05
Identities = 21/38 (55%), Positives = 28/38 (73%)
Frame = +2
Query: 5 LGECAVKEEFPTATIIKASDIYGSEDRFLRSFATNWRY 118
+GE V++ FP A I+K SDI+G EDRFL SFA+ R+
Sbjct: 186 VGEKVVRDAFPEAIIVKPSDIFGREDRFLNSFASMHRF 223
>BC009311-1|AAH09311.1| 377|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 9, 39kDa protein.
Length = 377
Score = 62.1 bits (144), Expect = 1e-09
Identities = 41/117 (35%), Positives = 65/117 (55%), Gaps = 1/117 (0%)
Frame = +3
Query: 132 MPLYKNGMATVKQPVFVSDVAQAIVNAARDPDTKCQLYQALGPKRYLLADLVDWFYKLMR 311
+PL G TVKQPV+V DV++ IVNA +DPD + + +GP RYLL LV + + +
Sbjct: 226 IPLGSLGWKTVKQPVYVVDVSKGIVNAVKDPDANGKSFAFVGPSRYLLFHLVKYIFAVAH 285
Query: 312 KDEKWGYYRYDMKYDPVFPIK-VALINLISPAYPLGNLHWEGIEKESTTDVPLPGVP 479
+ + + + P+F + VA + ISP P + + +E+ TD+ LP +P
Sbjct: 286 R----LFLPFPL---PLFAYRWVARVFEISPFEPW--ITRDKVERMHITDMKLPHLP 333
Score = 48.0 bits (109), Expect = 2e-05
Identities = 21/38 (55%), Positives = 28/38 (73%)
Frame = +2
Query: 5 LGECAVKEEFPTATIIKASDIYGSEDRFLRSFATNWRY 118
+GE V++ FP A I+K SDI+G EDRFL SFA+ R+
Sbjct: 186 VGEKVVRDAFPEAIIVKPSDIFGREDRFLNSFASMHRF 223
>BC003351-1|AAH03351.1| 338|Homo sapiens Similar to NADH
dehydrogenase (ubiquinone) 1 alpha subcomplex, 9 (39kD)
protein.
Length = 338
Score = 62.1 bits (144), Expect = 1e-09
Identities = 41/117 (35%), Positives = 65/117 (55%), Gaps = 1/117 (0%)
Frame = +3
Query: 132 MPLYKNGMATVKQPVFVSDVAQAIVNAARDPDTKCQLYQALGPKRYLLADLVDWFYKLMR 311
+PL G TVKQPV+V DV++ IVNA +DPD + + +GP RYLL LV + + +
Sbjct: 187 IPLGSLGWKTVKQPVYVVDVSKGIVNAVKDPDANGKSFAFVGPSRYLLFHLVKYIFAVAH 246
Query: 312 KDEKWGYYRYDMKYDPVFPIK-VALINLISPAYPLGNLHWEGIEKESTTDVPLPGVP 479
+ + + + P+F + VA + ISP P + + +E+ TD+ LP +P
Sbjct: 247 R----LFLPFPL---PLFAYRWVARVFEISPFEPW--ITRDKVERMHITDMKLPHLP 294
Score = 48.0 bits (109), Expect = 2e-05
Identities = 21/38 (55%), Positives = 28/38 (73%)
Frame = +2
Query: 5 LGECAVKEEFPTATIIKASDIYGSEDRFLRSFATNWRY 118
+GE V++ FP A I+K SDI+G EDRFL SFA+ R+
Sbjct: 147 VGEKVVRDAFPEAIIVKPSDIFGREDRFLNSFASMHRF 184
>AF050641-1|AAD42055.1| 377|Homo sapiens NADH-ubiquinone
oxidoreductase 39kDa subunit protein.
Length = 377
Score = 62.1 bits (144), Expect = 1e-09
Identities = 41/117 (35%), Positives = 65/117 (55%), Gaps = 1/117 (0%)
Frame = +3
Query: 132 MPLYKNGMATVKQPVFVSDVAQAIVNAARDPDTKCQLYQALGPKRYLLADLVDWFYKLMR 311
+PL G TVKQPV+V DV++ IVNA +DPD + + +GP RYLL LV + + +
Sbjct: 226 IPLGSLGWKTVKQPVYVVDVSKGIVNAVKDPDANGKSFAFVGPSRYLLFHLVKYIFAVAH 285
Query: 312 KDEKWGYYRYDMKYDPVFPIK-VALINLISPAYPLGNLHWEGIEKESTTDVPLPGVP 479
+ + + + P+F + VA + ISP P + + +E+ TD+ LP +P
Sbjct: 286 R----LFLPFPL---PLFAYRWVARVFEISPFEPW--ITRDKVERMHITDMKLPHLP 333
Score = 48.0 bits (109), Expect = 2e-05
Identities = 21/38 (55%), Positives = 28/38 (73%)
Frame = +2
Query: 5 LGECAVKEEFPTATIIKASDIYGSEDRFLRSFATNWRY 118
+GE V++ FP A I+K SDI+G EDRFL SFA+ R+
Sbjct: 186 VGEKVVRDAFPEAIIVKPSDIFGREDRFLNSFASMHRF 223
>BC103928-1|AAI03929.1| 810|Homo sapiens protocadherin gamma
subfamily B, 1 protein.
Length = 810
Score = 30.3 bits (65), Expect = 3.7
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3
Query: 354 HISCHNGNSPIFHPCALVCKTNQPNQPTGSV 262
HIS N N+P+FH + V ++ N P S+
Sbjct: 437 HISDINDNAPVFHQASYVVHVSENNPPGASI 467
>BC103927-1|AAI03928.1| 810|Homo sapiens protocadherin gamma
subfamily B, 1 protein.
Length = 810
Score = 30.3 bits (65), Expect = 3.7
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3
Query: 354 HISCHNGNSPIFHPCALVCKTNQPNQPTGSV 262
HIS N N+P+FH + V ++ N P S+
Sbjct: 437 HISDINDNAPVFHQASYVVHVSENNPPGASI 467
>BC103926-1|AAI03927.1| 810|Homo sapiens protocadherin gamma
subfamily B, 1 protein.
Length = 810
Score = 30.3 bits (65), Expect = 3.7
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3
Query: 354 HISCHNGNSPIFHPCALVCKTNQPNQPTGSV 262
HIS N N+P+FH + V ++ N P S+
Sbjct: 437 HISDINDNAPVFHQASYVVHVSENNPPGASI 467
>AF152517-1|AAD43777.1| 810|Homo sapiens protocadherin gamma B1
short form protein protein.
Length = 810
Score = 30.3 bits (65), Expect = 3.7
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3
Query: 354 HISCHNGNSPIFHPCALVCKTNQPNQPTGSV 262
HIS N N+P+FH + V ++ N P S+
Sbjct: 437 HISDINDNAPVFHQASYVVHVSENNPPGASI 467
>AF152330-1|AAD43724.1| 927|Homo sapiens protocadherin gamma B1
protein.
Length = 927
Score = 30.3 bits (65), Expect = 3.7
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3
Query: 354 HISCHNGNSPIFHPCALVCKTNQPNQPTGSV 262
HIS N N+P+FH + V ++ N P S+
Sbjct: 437 HISDINDNAPVFHQASYVVHVSENNPPGASI 467
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,801,293
Number of Sequences: 237096
Number of extensions: 1684927
Number of successful extensions: 2961
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2961
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4327667848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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