Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_D13
         (482 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate c...    25   0.56 
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        24   0.98 
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    21   6.9  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   9.1  

>EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate
           carboxykinase protein.
          Length = 118

 Score = 24.6 bits (51), Expect = 0.56
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 414 GNLHWEGIEKESTTDVPL 467
           G + WEG+EKE   D+ +
Sbjct: 100 GGIFWEGLEKEVGDDIEI 117


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 23.8 bits (49), Expect = 0.98
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +3

Query: 300 KLMRKDEKWGYYRYDMKYD 356
           K MR    WGYY Y   Y+
Sbjct: 205 KRMRPAANWGYYAYPYCYN 223


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
            protein.
          Length = 1124

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +3

Query: 258  PKRYLLADLVDWFYKLMRKDEKW 326
            P  YLL D +   Y   RK+  W
Sbjct: 977  PTEYLLEDSMKQQYGKRRKEPPW 999


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -3

Query: 78   SEPYMSEALMMVAVGNSSFTAH 13
            S+P + EA   + V  +S T H
Sbjct: 1459 SKPIIPEAARFIEVATNSITLH 1480


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,674
Number of Sequences: 438
Number of extensions: 3653
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13174803
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)