Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0006_D12
(598 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_1152 + 9170628-9171899 64 8e-11
01_06_0824 - 32243495-32244319,32244449-32244859 62 2e-10
11_02_0011 - 7337618-7338496,7338596-7338991 58 5e-09
11_01_0750 - 6315126-6315896,6316371-6316784 56 2e-08
04_04_0619 + 26652923-26653267,26653440-26654273 56 2e-08
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 54 9e-08
11_02_0012 - 7346282-7347136,7347234-7347593 53 2e-07
03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869 49 2e-06
11_01_0771 + 6453130-6454488 48 4e-06
11_02_0014 - 7352619-7352918,7353173-7353418 46 3e-05
11_01_0767 + 6438648-6438809,6439146-6440000 43 2e-04
03_02_0834 - 11630288-11630500,11630531-11630623,11630844-116310... 35 0.057
04_03_0260 - 13580396-13582990 29 2.8
04_03_0256 - 13564070-13564456,13564543-13565299,13565734-135665... 29 2.8
05_04_0122 + 18198594-18202269,18202551-18202591,18203273-182032... 28 6.5
02_05_1302 + 35567585-35567848,35568303-35568368,35568475-355685... 28 6.5
>01_01_1152 + 9170628-9171899
Length = 423
Score = 64.1 bits (149), Expect = 8e-11
Identities = 43/146 (29%), Positives = 75/146 (51%), Gaps = 2/146 (1%)
Frame = +3
Query: 162 KSVILSAFSVMIPLAQLAIASTGESHDELLKAIDFPN-DNVTXAVFTDLNQKVRSIKGVD 338
++ I+S S LA +A + GE+ ELL + P+ + + T L ++R +
Sbjct: 59 RNFIVSPLSFHAALALVADGARGETQRELLGFLGSPSLAELHRSPTTRLVARLRHLPNTS 118
Query: 339 LKLANKVYIANGNELNDQFAVVSRDVFNSEVQNLNFGKN-EEAANIINTWVEDHTNKRIX 515
A V++ G L +FA + + + + +F E+A +N +V D T I
Sbjct: 119 F--ACGVWVDRGRALTPEFADAAASRYAAVAEPADFATQPEQARERVNAFVSDATEGLIR 176
Query: 516 NLVDPSSLDSSTQCVLVNAIYFKGSW 593
+++ P+S+DSST VL NA++FKG+W
Sbjct: 177 DVLPPNSVDSSTVVVLANAVHFKGTW 202
>01_06_0824 - 32243495-32244319,32244449-32244859
Length = 411
Score = 62.5 bits (145), Expect = 2e-10
Identities = 44/155 (28%), Positives = 73/155 (47%), Gaps = 9/155 (5%)
Frame = +3
Query: 159 DKSVILSAFSVMIPLAQLAIASTGESHDELLKAIDFPN--------DNVTXAVFTDLNQK 314
DK++ +S S+ LA L + GE+ D+++ + +V D +
Sbjct: 31 DKNLAVSPLSLHAALALLGAGARGETLDQIIAFLGPAGGPAHAALASHVALCSLADDSGP 90
Query: 315 VRSIKGVDLKLANKVYIANGNELNDQFAVVSRDVFNSEVQNLNF-GKNEEAANIINTWVE 491
G ++ AN V++ L +A V D + +E + ++F K EEA IN W E
Sbjct: 91 GDDRGGPKVRFANGVWVDAALRLKAAYARVVADKYRAEARPVSFRDKLEEARREINEWFE 150
Query: 492 DHTNKRIXNLVDPSSLDSSTQCVLVNAIYFKGSWK 596
T RI + + ++D +T VL NA+YFKG W+
Sbjct: 151 SATAGRIKDFLPKDAVDRATPAVLGNALYFKGDWE 185
>11_02_0011 - 7337618-7338496,7338596-7338991
Length = 424
Score = 58.0 bits (134), Expect = 5e-09
Identities = 45/151 (29%), Positives = 71/151 (47%), Gaps = 6/151 (3%)
Frame = +3
Query: 159 DKSVILSAFSVMIPLAQLAIASTGESHDELLK-----AIDFPNDNVTXAVFTDLNQKVRS 323
+K+++ S S+ LA +A + G + DELL ++D ++V AV L + S
Sbjct: 30 NKNLVFSPASLYAALALVAAGARGTTLDELLALLGAASLDDLEESVRRAVEVGLADESAS 89
Query: 324 IKGVDLKLANKVYIANGNELNDQFAVVSRDVFNSEVQNLNFGKN-EEAANIINTWVEDHT 500
G + A V+ EL + + + + + NF + + + IN WV T
Sbjct: 90 -GGPRVSDACGVWHDETLELKPAYRAAAAGTYKAVTRAANFQRQPKRSRKKINKWVSKAT 148
Query: 501 NKRIXNLVDPSSLDSSTQCVLVNAIYFKGSW 593
NK I ++ S+ T VLVNAIYFKG W
Sbjct: 149 NKLIPEILPDGSVHVDTALVLVNAIYFKGKW 179
>11_01_0750 - 6315126-6315896,6316371-6316784
Length = 394
Score = 56.4 bits (130), Expect = 2e-08
Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Frame = +3
Query: 330 GVDLKLANKVYIANGNELNDQFAVVSRDVFNSEVQNLNF-GKNEEAANIINTWVEDHTNK 506
G L A V+ L+ +F ++ +V+ S + +F K E+A + IN+WV+D T
Sbjct: 97 GPRLAFAGGVWADASRSLSPEFVGLAGNVYGSAAKKADFKNKPEDAPDQINSWVKDSTKG 156
Query: 507 RIXNLVDPSSLDSSTQCVLVNAIYFKGSW 593
+ L+ ++D +T VL +A+YF+G W
Sbjct: 157 TVTTLLPAGTIDQNTGLVLGSALYFRGRW 185
>04_04_0619 + 26652923-26653267,26653440-26654273
Length = 392
Score = 56.4 bits (130), Expect = 2e-08
Identities = 36/142 (25%), Positives = 67/142 (47%), Gaps = 1/142 (0%)
Frame = +3
Query: 171 ILSAFSVMIPLAQLAIASTGESHDELLKAIDFPNDNVTXAVFTDLNQKVRSIKGVDLKLA 350
+ S + LA LA + GE+ +LL + + + A L ++R+ L A
Sbjct: 23 MFSPLGLRAGLALLATGTDGETLRQLLAFLGSQHIHQLNAASAGLLAEMRAWP--QLSFA 80
Query: 351 NKVYIANGNELNDQFAVVSRDVFNSEVQNLNFGKNEEAANI-INTWVEDHTNKRIXNLVD 527
+++ L +F + + ++++F AA +N ++ TN R+ N +
Sbjct: 81 AGIFVDRSLRLRPEFQSTAAAAHGAFPRSVDFQNQANAAAAEVNRFISQATNGRLNNTIS 140
Query: 528 PSSLDSSTQCVLVNAIYFKGSW 593
P + SST+CVL NA++FK +W
Sbjct: 141 PGTFGSSTKCVLANAMHFKATW 162
>03_05_0293 +
22849103-22849513,22849670-22849756,22850156-22850284,
22850507-22851262,22853474-22854250
Length = 719
Score = 54.0 bits (124), Expect = 9e-08
Identities = 23/49 (46%), Positives = 34/49 (69%)
Frame = +3
Query: 447 GKNEEAANIINTWVEDHTNKRIXNLVDPSSLDSSTQCVLVNAIYFKGSW 593
GK E A+ +N+WVE T+ I ++ P S+D +T+ VL NA+YFKG+W
Sbjct: 208 GKAAEVASQVNSWVEKVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAW 256
Score = 48.0 bits (109), Expect = 6e-06
Identities = 19/45 (42%), Positives = 30/45 (66%)
Frame = +3
Query: 459 EAANIINTWVEDHTNKRIXNLVDPSSLDSSTQCVLVNAIYFKGSW 593
E +N+WV+ T+ I N+ P S++ +T+ VL NA+YFKG+W
Sbjct: 464 EVLGQVNSWVDRVTSGLIKNIATPRSINHNTKLVLANALYFKGAW 508
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 53.2 bits (122), Expect = 2e-07
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 3/150 (2%)
Frame = +3
Query: 153 NPDKSVILSAFSVMIPLAQLAIASTGESHDELLKAIDFPNDNVTXAVFTDLNQKVRSIKG 332
N +++V+ S S+ LA +A + G + DEL+ + A DL + VR +
Sbjct: 28 NSNRNVVFSPVSLYAALALVASGARGTTLDELVALLG-------AASLDDLEESVR--RA 78
Query: 333 VDLKLANKVYIANGNELNDQFAVV--SRDVFNSEVQNLNFGKNEEAANI-INTWVEDHTN 503
V++ LA++ + G ++ V R + +F + +++ IN WV TN
Sbjct: 79 VEVGLADESE-SGGPRVSYACGVWHDERLALKPAYRAADFQRQPKSSRKKINKWVSKATN 137
Query: 504 KRIXNLVDPSSLDSSTQCVLVNAIYFKGSW 593
K I ++ S+ T VLVNAIYFKG W
Sbjct: 138 KLIREILPDGSVHGGTALVLVNAIYFKGKW 167
>03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869
Length = 258
Score = 49.2 bits (112), Expect = 2e-06
Identities = 20/45 (44%), Positives = 32/45 (71%)
Frame = +3
Query: 459 EAANIINTWVEDHTNKRIXNLVDPSSLDSSTQCVLVNAIYFKGSW 593
E A+ +N+WV+ T+ I ++ P S+D +T+ VL NA+YFKG+W
Sbjct: 4 EVASQVNSWVDRVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAW 48
>11_01_0771 + 6453130-6454488
Length = 452
Score = 48.4 bits (110), Expect = 4e-06
Identities = 23/48 (47%), Positives = 27/48 (56%)
Frame = +3
Query: 450 KNEEAANIINTWVEDHTNKRIXNLVDPSSLDSSTQCVLVNAIYFKGSW 593
K EEA IN W T K I +++ P S+ T VL NAIYFKG W
Sbjct: 169 KAEEARKQINAWARRATGKLITDVLPPRSVGPETAVVLGNAIYFKGKW 216
>11_02_0014 - 7352619-7352918,7353173-7353418
Length = 181
Score = 45.6 bits (103), Expect = 3e-05
Identities = 21/40 (52%), Positives = 24/40 (60%)
Frame = +3
Query: 474 INTWVEDHTNKRIXNLVDPSSLDSSTQCVLVNAIYFKGSW 593
IN WV TNK I ++ S+ T VLVNAIYFKG W
Sbjct: 90 INEWVSKATNKLIPEILPDGSVHRLTTLVLVNAIYFKGKW 129
>11_01_0767 + 6438648-6438809,6439146-6440000
Length = 338
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/45 (44%), Positives = 24/45 (53%)
Frame = +3
Query: 459 EAANIINTWVEDHTNKRIXNLVDPSSLDSSTQCVLVNAIYFKGSW 593
EA IN WV T I ++ P S T+ V+ NAIYFKG W
Sbjct: 57 EARKEINAWVARATKNLITEVIKPESQSVDTRHVVGNAIYFKGEW 101
>03_02_0834 -
11630288-11630500,11630531-11630623,11630844-11631050,
11631301-11633089,11633817-11634145
Length = 876
Score = 34.7 bits (76), Expect = 0.057
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Frame = +3
Query: 231 ESHDELLKAIDFPNDNVTXAVFTDLNQKVRSI--KGVDLKLANKVYIANGNELNDQFAVV 404
+ HD LLK+ NDN+T + NQ + + KG D K +KV N+Q +
Sbjct: 467 KEHDTLLKSSVELNDNLTKTA-EERNQILECLKEKGGDNKALHKVIARLQRISNEQEKTI 525
Query: 405 S--RDVFNSEVQNLNFGKNEEAANI 473
+ R FN+E++N + G +E + +
Sbjct: 526 TGLRQGFNAELENKSLGTSESISRM 550
>04_03_0260 - 13580396-13582990
Length = 864
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = +3
Query: 393 FAVVSRDVFNSEVQNLNFGKNEEAANIINTWVEDHTNKRIXNLVDPSSLD 542
F VV ++ + +N++ + EEA +IN E N ++ +++D S D
Sbjct: 737 FGVVLMEIISGR-KNIDISQPEEAVQLINLLREKAQNNQLIDMIDKHSSD 785
>04_03_0256 -
13564070-13564456,13564543-13565299,13565734-13566535,
13566884-13566917
Length = 659
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/51 (27%), Positives = 28/51 (54%)
Frame = +3
Query: 390 QFAVVSRDVFNSEVQNLNFGKNEEAANIINTWVEDHTNKRIXNLVDPSSLD 542
+F VV ++ + +N++ + EEA +IN E N ++ +++D S D
Sbjct: 531 KFGVVLMEIISGR-KNIDISQPEEAVQLINLLREKAQNSQLIDMIDKHSND 580
>05_04_0122 + 18198594-18202269,18202551-18202591,18203273-18203281,
18203336-18203551,18204257-18204361,18204761-18204919
Length = 1401
Score = 27.9 bits (59), Expect = 6.5
Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = -1
Query: 478 LIMLAASSF--LPKFKFCTSELNTSLDTTAN*SFNSLPLAMYTLLA 347
L++L SF LP C S L SL+ T+N S SLP M L A
Sbjct: 1121 LVILGCPSFSSLPASIRCLSNLK-SLELTSNNSLTSLPEGMQNLTA 1165
>02_05_1302 +
35567585-35567848,35568303-35568368,35568475-35568573,
35569028-35569061,35569147-35569246,35569738-35569813,
35569974-35570315,35570426-35570569,35570840-35571073,
35571149-35571212,35571297-35571340,35571431-35571601
Length = 545
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -1
Query: 109 FPFLSTLCGSMSLANVKAA-RANMVIIIFMLSVTFVF 2
FPFL T + +N+KAA +V ++F +SVT F
Sbjct: 190 FPFLMTRACCEACSNLKAAFLVAVVFLLFCMSVTLYF 226
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,764,423
Number of Sequences: 37544
Number of extensions: 242685
Number of successful extensions: 581
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 568
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 580
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1423789920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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