Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_D10
         (314 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate r...    21   3.5  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    21   4.7  
AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding prote...    21   4.7  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    20   8.1  

>DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate
           receptor protein.
          Length = 322

 Score = 21.0 bits (42), Expect = 3.5
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +3

Query: 114 SGLTRGCAGKRVLSLSTLMVPPVLWSRYP*LAMKTTSSVL 233
           + LT G AG+ +   S+    P+L   YP L M T   ++
Sbjct: 14  TSLTLGPAGQVLAGSSSPRPKPLLKKEYP-LVMDTKLKII 52


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 20.6 bits (41), Expect = 4.7
 Identities = 10/40 (25%), Positives = 15/40 (37%)
 Frame = +2

Query: 83  YIEQYEDQPEQWANSRVRRQAGALTINSDGTSGAMVKVPI 202
           Y      + E W N+ V R       NS+  + + V   I
Sbjct: 264 YFHSLASRVESWVNTSVIRNYTLFNENSEAAARSFVPFSI 303


>AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding protein
           ASP5 protein.
          Length = 143

 Score = 20.6 bits (41), Expect = 4.7
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = -2

Query: 112 LRLILILFDVVTRLFNKHVTAVDADQ 35
           ++ +L+L  +VT +  K V ++ ADQ
Sbjct: 3   VKSVLLLITIVTFVALKPVKSMSADQ 28


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 19.8 bits (39), Expect = 8.1
 Identities = 13/41 (31%), Positives = 23/41 (56%)
 Frame = +3

Query: 138 GKRVLSLSTLMVPPVLWSRYP*LAMKTTSSVLLVQSISLTK 260
           G+  L+    + PPV+WS    LA +   SV ++Q+I + +
Sbjct: 460 GRITLNSKDPLDPPVIWSND--LATEHDRSV-MIQAIRVVQ 497


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,044
Number of Sequences: 438
Number of extensions: 1620
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  6719922
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)