Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0006_D07
(559 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 29 2.3
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 29 2.3
U23139-13|AAK31484.1| 156|Caenorhabditis elegans Hypothetical p... 28 5.2
U23139-12|AAU20847.1| 262|Caenorhabditis elegans Hypothetical p... 28 5.2
U53335-5|AAY86255.1| 233|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z68104-8|CAA92117.1| 1077|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z66563-4|CAA91470.1| 1077|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z50739-2|CAA90602.2| 381|Caenorhabditis elegans Hypothetical pr... 27 9.1
AF435953-1|AAL30829.1| 1077|Caenorhabditis elegans eIF2 alpha ki... 27 9.1
AF193341-1|AAF61201.1| 1077|Caenorhabditis elegans eukaryotic tr... 27 9.1
AC024826-12|AAF60792.1| 323|Caenorhabditis elegans Hypothetical... 27 9.1
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 29.1 bits (62), Expect = 2.3
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +3
Query: 75 CSSQMWGSNQSTSISPCQTIAEPPITSLRRILC 173
C+S +WG + S P T+ +P + S+R+ C
Sbjct: 51 CTSAIWGDWGAWSTCPTVTVIDPTVVSVRKRDC 83
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 29.1 bits (62), Expect = 2.3
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +3
Query: 75 CSSQMWGSNQSTSISPCQTIAEPPITSLRRILC 173
C+S +WG + S P T+ +P + S+R+ C
Sbjct: 51 CTSAIWGDWGAWSTCPTVTVIDPTVVSVRKRDC 83
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 29.1 bits (62), Expect = 2.3
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +3
Query: 75 CSSQMWGSNQSTSISPCQTIAEPPITSLRRILC 173
C+S +WG + S P T+ +P + S+R+ C
Sbjct: 51 CTSAIWGDWGAWSTCPTVTVIDPTVVSVRKRDC 83
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 29.1 bits (62), Expect = 2.3
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +3
Query: 75 CSSQMWGSNQSTSISPCQTIAEPPITSLRRILC 173
C+S +WG + S P T+ +P + S+R+ C
Sbjct: 51 CTSAIWGDWGAWSTCPTVTVIDPTVVSVRKRDC 83
>U23139-13|AAK31484.1| 156|Caenorhabditis elegans Hypothetical
protein F13H8.1a protein.
Length = 156
Score = 27.9 bits (59), Expect = 5.2
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 5/38 (13%)
Frame = +2
Query: 350 TSSPQHVGRQLSTNSSVKSIRRSQEY-----PPSNPIN 448
+S P+ +GR++ N IRRSQ++ PP P++
Sbjct: 7 SSQPKRLGRRVFPNQQSDQIRRSQQFLHYVPPPEPPVD 44
>U23139-12|AAU20847.1| 262|Caenorhabditis elegans Hypothetical
protein F13H8.1b protein.
Length = 262
Score = 27.9 bits (59), Expect = 5.2
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 5/38 (13%)
Frame = +2
Query: 350 TSSPQHVGRQLSTNSSVKSIRRSQEY-----PPSNPIN 448
+S P+ +GR++ N IRRSQ++ PP P++
Sbjct: 7 SSQPKRLGRRVFPNQQSDQIRRSQQFLHYVPPPEPPVD 44
>U53335-5|AAY86255.1| 233|Caenorhabditis elegans Hypothetical
protein C55C3.8 protein.
Length = 233
Score = 27.5 bits (58), Expect = 6.9
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = -3
Query: 386 LTAVGQRVAGTMCAGDSLASVITDMRTVSAYWITVN--DILIFA*GGRQYT 240
++ VGQ +AG M A SL D+++++ VN + LIF G YT
Sbjct: 151 VSVVGQLIAGLMIAERSLDLEHNDIKSLNILLRVVNRSNKLIFTINGNDYT 201
>Z68104-8|CAA92117.1| 1077|Caenorhabditis elegans Hypothetical
protein F46C3.1 protein.
Length = 1077
Score = 27.1 bits (57), Expect = 9.1
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +1
Query: 385 NQLLSKVDQEIARISTIQSHQPAGTSETETAQELTTREIGPVGE 516
N+ + + +EIA I + H A ETE QEL RE G+
Sbjct: 834 NEAVKETKKEIAVIEELSIHNRAMIVETEN-QELEVRERNDTGD 876
>Z66563-4|CAA91470.1| 1077|Caenorhabditis elegans Hypothetical
protein F46C3.1 protein.
Length = 1077
Score = 27.1 bits (57), Expect = 9.1
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +1
Query: 385 NQLLSKVDQEIARISTIQSHQPAGTSETETAQELTTREIGPVGE 516
N+ + + +EIA I + H A ETE QEL RE G+
Sbjct: 834 NEAVKETKKEIAVIEELSIHNRAMIVETEN-QELEVRERNDTGD 876
>Z50739-2|CAA90602.2| 381|Caenorhabditis elegans Hypothetical
protein F13D2.3 protein.
Length = 381
Score = 27.1 bits (57), Expect = 9.1
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 90 WGSNQSTSISPCQTIAEPPITSLRRIL 170
+ S QS + +TI PP T+LRR L
Sbjct: 283 YASQQSVRVPLAETIRHPPTTALRRQL 309
>AF435953-1|AAL30829.1| 1077|Caenorhabditis elegans eIF2 alpha
kinase protein.
Length = 1077
Score = 27.1 bits (57), Expect = 9.1
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +1
Query: 385 NQLLSKVDQEIARISTIQSHQPAGTSETETAQELTTREIGPVGE 516
N+ + + +EIA I + H A ETE QEL RE G+
Sbjct: 834 NEAVKETKKEIAVIEELSIHNRAMIVETEN-QELEVRERNDTGD 876
>AF193341-1|AAF61201.1| 1077|Caenorhabditis elegans eukaryotic
translation initiationfactor 2 alpha kinase PEK protein.
Length = 1077
Score = 27.1 bits (57), Expect = 9.1
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +1
Query: 385 NQLLSKVDQEIARISTIQSHQPAGTSETETAQELTTREIGPVGE 516
N+ + + +EIA I + H A ETE QEL RE G+
Sbjct: 834 NEAVKETKKEIAVIEELSIHNRAMIVETEN-QELEVRERNDTGD 876
>AC024826-12|AAF60792.1| 323|Caenorhabditis elegans Hypothetical
protein Y55F3AM.11 protein.
Length = 323
Score = 27.1 bits (57), Expect = 9.1
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -2
Query: 213 CRPWFCVDGSVYFSIG 166
C PW C + SV FS+G
Sbjct: 143 CNPWKCPNNSVMFSLG 158
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.313 0.125 0.359
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,455,482
Number of Sequences: 27780
Number of extensions: 259552
Number of successful extensions: 590
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 590
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1144922904
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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