Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0006_D06
(532 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC004430-1|AAH04430.1| 422|Homo sapiens proteasome (prosome, ma... 128 9e-30
BC000437-1|AAH00437.1| 422|Homo sapiens proteasome (prosome, ma... 128 9e-30
AK223196-1|BAD96916.1| 423|Homo sapiens proteasome 26S non-ATPa... 128 9e-30
AB003102-1|BAA19748.1| 422|Homo sapiens 26S proteasome subunit ... 128 9e-30
AF001212-1|AAB58732.1| 422|Homo sapiens 26S proteasome subunit ... 124 1e-28
BC033898-1|AAH33898.1| 468|Homo sapiens transmembrane protein 1... 30 4.4
EF415430-1|ABO27011.1| 106|Homo sapiens T cell receptor beta ch... 29 7.7
BC128137-1|AAI28138.1| 417|Homo sapiens protein phosphatase 4, ... 29 7.7
BC128136-1|AAI28137.1| 417|Homo sapiens protein phosphatase 4, ... 29 7.7
BC110889-1|AAI10890.1| 360|Homo sapiens PPP4R2 protein protein. 29 7.7
BC100281-1|AAI00282.1| 271|Homo sapiens PPP4R2 protein protein. 29 7.7
AJ271448-1|CAB93534.2| 495|Homo sapiens protein phosphatase 4 r... 29 7.7
AF327345-1|AAL56006.1| 417|Homo sapiens hypothetical protein SB... 29 7.7
>BC004430-1|AAH04430.1| 422|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 11 protein.
Length = 422
Score = 128 bits (310), Expect = 9e-30
Identities = 66/136 (48%), Positives = 87/136 (63%)
Frame = +3
Query: 123 AGAMLFERSRVSSSSNRDEDVRMTDKMVSTGDIPEDDEENIRAKEQGILNXXXXXXXXXX 302
A + F+R++ S++R+ + + +V DI E+DEE ++ KEQ IL
Sbjct: 4 AAVVEFQRAQSLLSTDREASIDILHSIVKR-DIQENDEEAVQVKEQSILELGSLLAKTGQ 62
Query: 303 XXXXXXXXXXTRPFLSLISKAKAAKLVRSLVDFFLDXEAGIGIEVQLCKECIEWAKEERR 482
RPFL+ ISKAKAA+LVRSL+D FLD EA G EV+LC ECIEWAK E+R
Sbjct: 63 AAELGGLLKYVRPFLNSISKAKAARLVRSLLDLFLDMEAATGQEVELCLECIEWAKSEKR 122
Query: 483 TFLRQSLEARLIALYF 530
TFLRQ+LEARL++LYF
Sbjct: 123 TFLRQALEARLVSLYF 138
>BC000437-1|AAH00437.1| 422|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 11 protein.
Length = 422
Score = 128 bits (310), Expect = 9e-30
Identities = 66/136 (48%), Positives = 87/136 (63%)
Frame = +3
Query: 123 AGAMLFERSRVSSSSNRDEDVRMTDKMVSTGDIPEDDEENIRAKEQGILNXXXXXXXXXX 302
A + F+R++ S++R+ + + +V DI E+DEE ++ KEQ IL
Sbjct: 4 AAVVEFQRAQSLLSTDREASIDILHSIVKR-DIQENDEEAVQVKEQSILELGSLLAKTGQ 62
Query: 303 XXXXXXXXXXTRPFLSLISKAKAAKLVRSLVDFFLDXEAGIGIEVQLCKECIEWAKEERR 482
RPFL+ ISKAKAA+LVRSL+D FLD EA G EV+LC ECIEWAK E+R
Sbjct: 63 AAELGGLLKYVRPFLNSISKAKAARLVRSLLDLFLDMEAATGQEVELCLECIEWAKSEKR 122
Query: 483 TFLRQSLEARLIALYF 530
TFLRQ+LEARL++LYF
Sbjct: 123 TFLRQALEARLVSLYF 138
>AK223196-1|BAD96916.1| 423|Homo sapiens proteasome 26S non-ATPase
subunit 11 variant protein.
Length = 423
Score = 128 bits (310), Expect = 9e-30
Identities = 66/136 (48%), Positives = 87/136 (63%)
Frame = +3
Query: 123 AGAMLFERSRVSSSSNRDEDVRMTDKMVSTGDIPEDDEENIRAKEQGILNXXXXXXXXXX 302
A + F+R++ S++R+ + + +V DI E+DEE ++ KEQ IL
Sbjct: 4 AAVVEFQRAQSLLSTDREASIDILHSIVKR-DIQENDEEAVQVKEQSILELGSLLAKTGQ 62
Query: 303 XXXXXXXXXXTRPFLSLISKAKAAKLVRSLVDFFLDXEAGIGIEVQLCKECIEWAKEERR 482
RPFL+ ISKAKAA+LVRSL+D FLD EA G EV+LC ECIEWAK E+R
Sbjct: 63 AAELGGLLKYVRPFLNSISKAKAARLVRSLLDLFLDMEAATGQEVELCLECIEWAKSEKR 122
Query: 483 TFLRQSLEARLIALYF 530
TFLRQ+LEARL++LYF
Sbjct: 123 TFLRQALEARLVSLYF 138
>AB003102-1|BAA19748.1| 422|Homo sapiens 26S proteasome subunit
p44.5 protein.
Length = 422
Score = 128 bits (310), Expect = 9e-30
Identities = 66/136 (48%), Positives = 87/136 (63%)
Frame = +3
Query: 123 AGAMLFERSRVSSSSNRDEDVRMTDKMVSTGDIPEDDEENIRAKEQGILNXXXXXXXXXX 302
A + F+R++ S++R+ + + +V DI E+DEE ++ KEQ IL
Sbjct: 4 AAVVEFQRAQSLLSTDREASIDILHSIVKR-DIQENDEEAVQVKEQSILELGSLLAKTGQ 62
Query: 303 XXXXXXXXXXTRPFLSLISKAKAAKLVRSLVDFFLDXEAGIGIEVQLCKECIEWAKEERR 482
RPFL+ ISKAKAA+LVRSL+D FLD EA G EV+LC ECIEWAK E+R
Sbjct: 63 AAELGGLLKYVRPFLNSISKAKAARLVRSLLDLFLDMEAATGQEVELCLECIEWAKSEKR 122
Query: 483 TFLRQSLEARLIALYF 530
TFLRQ+LEARL++LYF
Sbjct: 123 TFLRQALEARLVSLYF 138
>AF001212-1|AAB58732.1| 422|Homo sapiens 26S proteasome subunit 9
protein.
Length = 422
Score = 124 bits (300), Expect = 1e-28
Identities = 65/136 (47%), Positives = 86/136 (63%)
Frame = +3
Query: 123 AGAMLFERSRVSSSSNRDEDVRMTDKMVSTGDIPEDDEENIRAKEQGILNXXXXXXXXXX 302
A + F+R++ S++R+ + + +V DI E+DEE ++ KEQ IL
Sbjct: 4 AAVVEFQRAQSLLSTDREASIDILHSIVKR-DIQENDEEAVQVKEQSILELGSLLAKTGQ 62
Query: 303 XXXXXXXXXXTRPFLSLISKAKAAKLVRSLVDFFLDXEAGIGIEVQLCKECIEWAKEERR 482
RPFL+ ISKAKAA+LVRSL+D FLD EA G EV+LC E IEWAK E+R
Sbjct: 63 AAELGGLLKYVRPFLNSISKAKAARLVRSLLDLFLDMEAATGQEVELCLESIEWAKSEKR 122
Query: 483 TFLRQSLEARLIALYF 530
TFLRQ+LEARL++LYF
Sbjct: 123 TFLRQALEARLVSLYF 138
>BC033898-1|AAH33898.1| 468|Homo sapiens transmembrane protein 151
protein.
Length = 468
Score = 30.3 bits (65), Expect = 4.4
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -2
Query: 261 LAL*PLCFLRHLLECHQC*PFCRSCGRLRLYSMTMIRVISRITSLQPC 118
LA L +L +L EC C RSC R + T++ +I R+ PC
Sbjct: 103 LAFVSLLYLLYLAECWHC--HVRSCQAPRTDAHTVLALIRRLQQAPPC 148
>EF415430-1|ABO27011.1| 106|Homo sapiens T cell receptor beta chain
protein.
Length = 106
Score = 29.5 bits (63), Expect = 7.7
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2
Query: 368 GSEISPFPCRFLPRXGSRYWYRSTIMQGM 454
G E++ C+ +P S +WYR T+M+G+
Sbjct: 9 GQEVT-LRCKPIPGHNSLFWYRQTMMRGL 36
>BC128137-1|AAI28138.1| 417|Homo sapiens protein phosphatase 4,
regulatory subunit 2 protein.
Length = 417
Score = 29.5 bits (63), Expect = 7.7
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +3
Query: 84 IRL*CSHINKHNMAGAMLFERSRVSSSSNRDEDVRMTDKMVSTGDIPEDDEE 239
+R S ++ M+ E SSS ++D+D R T + + D ED+EE
Sbjct: 256 VRETASQTTSSEISSVMVGETEASSSSQDKDKDSRCTRQHCTEEDEEEDEEE 307
>BC128136-1|AAI28137.1| 417|Homo sapiens protein phosphatase 4,
regulatory subunit 2 protein.
Length = 417
Score = 29.5 bits (63), Expect = 7.7
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +3
Query: 84 IRL*CSHINKHNMAGAMLFERSRVSSSSNRDEDVRMTDKMVSTGDIPEDDEE 239
+R S ++ M+ E SSS ++D+D R T + + D ED+EE
Sbjct: 256 VRETASQTTSSEISSVMVGETEASSSSQDKDKDSRCTRQHCTEEDEEEDEEE 307
>BC110889-1|AAI10890.1| 360|Homo sapiens PPP4R2 protein protein.
Length = 360
Score = 29.5 bits (63), Expect = 7.7
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +3
Query: 84 IRL*CSHINKHNMAGAMLFERSRVSSSSNRDEDVRMTDKMVSTGDIPEDDEE 239
+R S ++ M+ E SSS ++D+D R T + + D ED+EE
Sbjct: 199 VRETASQTTSSEISSVMVGETEASSSSQDKDKDSRCTRQHCTEEDEEEDEEE 250
>BC100281-1|AAI00282.1| 271|Homo sapiens PPP4R2 protein protein.
Length = 271
Score = 29.5 bits (63), Expect = 7.7
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +3
Query: 84 IRL*CSHINKHNMAGAMLFERSRVSSSSNRDEDVRMTDKMVSTGDIPEDDEE 239
+R S ++ M+ E SSS ++D+D R T + + D ED+EE
Sbjct: 200 VRETASQTTSSEISSVMVGETEASSSSQDKDKDSRCTRQHCTEEDEEEDEEE 251
>AJ271448-1|CAB93534.2| 495|Homo sapiens protein phosphatase 4
regulatory subunit 2 protein.
Length = 495
Score = 29.5 bits (63), Expect = 7.7
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +3
Query: 84 IRL*CSHINKHNMAGAMLFERSRVSSSSNRDEDVRMTDKMVSTGDIPEDDEE 239
+R S ++ M+ E SSS ++D+D R T + + D ED+EE
Sbjct: 334 VRETASQTTSSEISSVMVGETEASSSSQDKDKDSRCTRQHCTEEDEEEDEEE 385
>AF327345-1|AAL56006.1| 417|Homo sapiens hypothetical protein
SBBI57 protein.
Length = 417
Score = 29.5 bits (63), Expect = 7.7
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +3
Query: 84 IRL*CSHINKHNMAGAMLFERSRVSSSSNRDEDVRMTDKMVSTGDIPEDDEE 239
+R S ++ M+ E SSS ++D+D R T + + D ED+EE
Sbjct: 256 VRETASQTTSSEISSVMVGETEASSSSQDKDKDSRCTRQHCTEEDEEEDEEE 307
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,162,830
Number of Sequences: 237096
Number of extensions: 1035818
Number of successful extensions: 2369
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2224
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2369
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5160237082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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