Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_D04
         (655 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                27   0.21 
EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle pr...    24   1.5  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   1.9  
AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex det...    23   2.6  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   2.6  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    22   6.0  

>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 26.6 bits (56), Expect = 0.21
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = +1

Query: 247 AGQLSPGFYISQQHPVQPT*RRRVKPHH 330
           AG L P ++  Q HP Q    R   PHH
Sbjct: 309 AGFLPPSYHPHQHHPSQYHPHRGSSPHH 336


>EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle
           protein protein.
          Length = 138

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +2

Query: 215 LVTSSRTELNVQGSYPQGFTFLSNILCSQHSG 310
           ++TS + E+N  G+Y   F   SN +  Q SG
Sbjct: 28  VITSQQLEVNFDGNYINNFE-TSNGISHQESG 58


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 12/29 (41%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
 Frame = +2

Query: 374 FSTGQIGNVHECVIEGGEYVCH--PEYYL 454
           F TG +GNV  CV+       H    YYL
Sbjct: 64  FVTGLVGNVSTCVVIARNKSMHTATNYYL 92


>AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 11/33 (33%), Positives = 14/33 (42%)
 Frame = +2

Query: 554 RIRHEDETFKGEKLLDGIGKVVNLFTNYRXKNN 652
           R R E E  K  K++  +    N   NY   NN
Sbjct: 290 RDRRERERSKEPKIISSLSNSCNYSNNYYNNNN 322


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = +3

Query: 321 ASSRSAFTFMPPVTRAIVSRPDRSVTCTNV 410
           A  R  FT+   + ++I+  PD+ +T   +
Sbjct: 501 ADVRPPFTYASLIRQSIIESPDKQLTLNEI 530


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 13/55 (23%), Positives = 20/55 (36%)
 Frame = +2

Query: 110 GVRRHRGHIFNAANLHAGTSESTESRLGTRSRSLCLVTSSRTELNVQGSYPQGFT 274
           G      H+F  A+      +  E  L T   + CL     T +N Q +    F+
Sbjct: 265 GTNTDARHLFRTASSTPEDLQDLEEPLTTIQHNNCLTRIPSTRINKQHTRGNNFS 319


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,101
Number of Sequences: 438
Number of extensions: 4129
Number of successful extensions: 14
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)