Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0006_D02
(459 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC553.02 |||glutamine-dependent NAD|Schizosaccharomyces pombe|... 33 0.028
SPBP19A11.04c |mor2|cps12|morphogenesis protein Mor2|Schizosacch... 27 1.8
SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|... 26 2.4
SPBC29A10.02 |spo5|mrb1, mug12, SPBC365.18|meiotic RNA-binding p... 26 3.2
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 25 4.2
SPBP22H7.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 25 5.6
SPAC3G6.09c |tps2||trehalose-phosphate synthase Tps2 |Schizosacc... 25 5.6
SPAC6G10.05c |||TRAPP complex subunit Trs120 |Schizosaccharomyce... 25 5.6
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch... 25 7.3
SPAC1687.05 |pli1||SUMO E3 ligase Pli1|Schizosaccharomyces pombe... 25 7.3
SPAC25H1.09 |mde5|meu30, SPAC4A8.01|alpha-amylase homolog Mde5|S... 25 7.3
SPAC17D4.04 ||SPAC458.01|tRNA |Schizosaccharomyces pombe|chr 1||... 24 9.7
SPAC3C7.06c |pit1||serine/threonine protein kinase Pit1|Schizosa... 24 9.7
SPAC19A8.02 |||transcriptional coactivator |Schizosaccharomyces ... 24 9.7
SPAC2G11.05c |||BRO1 domain protein|Schizosaccharomyces pombe|ch... 24 9.7
SPAC6F6.02c |pof5||F-box protein Pof5|Schizosaccharomyces pombe|... 24 9.7
>SPCC553.02 |||glutamine-dependent NAD|Schizosaccharomyces pombe|chr
3|||Manual
Length = 700
Score = 32.7 bits (71), Expect = 0.028
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +2
Query: 191 EQNRLNYISHIEEAAKQNADIVVFPELTLT 280
E NRL I I+EA +QNA + V PEL +T
Sbjct: 20 EGNRLRIIDSIKEAKRQNASLRVGPELEVT 49
>SPBP19A11.04c |mor2|cps12|morphogenesis protein
Mor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2196
Score = 26.6 bits (56), Expect = 1.8
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = +1
Query: 52 CT*NDVSSTISNIFFLLLADLISKID 129
C ++S TISN +FL L++++ +I+
Sbjct: 1175 CFSKEISQTISNYYFLSLSEMLIQIN 1200
>SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 743
Score = 26.2 bits (55), Expect = 2.4
Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = -2
Query: 374 PANYHIVLDGELVSDTVAADRGL-VRRNW 291
P+NY +++ SDT AD G+ V NW
Sbjct: 558 PSNYSNLIENSSTSDTNNADNGMDVMGNW 586
>SPBC29A10.02 |spo5|mrb1, mug12, SPBC365.18|meiotic RNA-binding
protein 1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 567
Score = 25.8 bits (54), Expect = 3.2
Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +2
Query: 278 TNGTTSFAVPIHGLLQRYP--IPALHPELYDNLLVSMSAAARDNQIYV 415
T T++ + GL P IP++ P +DN +M + +R +Y+
Sbjct: 253 TKENTNYLSQLVGLHPAIPPAIPSMFPMSHDNKKSNMESTSRTRNVYI 300
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 25.4 bits (53), Expect = 4.2
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +1
Query: 277 NKWDDQFRRTNPRSAATVSDTSSP 348
N WDD +++N ++A T S+ P
Sbjct: 198 NSWDDSSKQSNTQTANTTSNLRVP 221
>SPBP22H7.04 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 255
Score = 25.0 bits (52), Expect = 5.6
Identities = 9/23 (39%), Positives = 18/23 (78%)
Frame = -3
Query: 457 VVTCAVHQFSRVYYNVNLIVPRR 389
+VT + F+++Y++ +LIVPR+
Sbjct: 184 IVTGFLSPFNKLYFSKSLIVPRK 206
>SPAC3G6.09c |tps2||trehalose-phosphate synthase Tps2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 849
Score = 25.0 bits (52), Expect = 5.6
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +2
Query: 125 STPQDSHYVAAVVEYQVSRGNVEQNRLNYISHIEEAA--KQNADIVVFPE 268
S+P D+ YVA+ Q+S GN + I+EAA +++ IV+ PE
Sbjct: 59 SSPWDAVYVASPGPVQISEGNDH----TVETKIDEAAVVHRSSSIVISPE 104
>SPAC6G10.05c |||TRAPP complex subunit Trs120 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1210
Score = 25.0 bits (52), Expect = 5.6
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 74 EDTSFYVQTTRLPYPLL*SEREHL 3
EDT FYV+ R+P L S+R L
Sbjct: 920 EDTEFYVRRLRIPVSLNISKRVDL 943
>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 24.6 bits (51), Expect = 7.3
Identities = 24/96 (25%), Positives = 40/96 (41%), Gaps = 11/96 (11%)
Frame = +2
Query: 179 RGNVEQNRLNYISHIEEAAKQNADIVVFPE----LTLTNGTTSFAVPIHG---LLQRYPI 337
+G V+ +R ++H+ + I PE T ++ +H L PI
Sbjct: 83 KGMVQTSRFALVAHLRSHTGEKPFICSVPECDRSFTRSDALAKHMRTVHEADTLRPSDPI 142
Query: 338 PALHPELYDNLLVSMSAAARD----NQIYVVINTRE 433
P HP N+ +M +AR+ Q++ V NT E
Sbjct: 143 PKAHPMHPQNVANAMVQSAREARAQQQMHGVGNTNE 178
>SPAC1687.05 |pli1||SUMO E3 ligase Pli1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 727
Score = 24.6 bits (51), Expect = 7.3
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2
Query: 332 PIPALHPELYDNLLVSMSAAARDNQ 406
PIP HP+L NLL + D Q
Sbjct: 670 PIPRAHPQLPKNLLSQTAGPLWDEQ 694
>SPAC25H1.09 |mde5|meu30, SPAC4A8.01|alpha-amylase homolog
Mde5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 513
Score = 24.6 bits (51), Expect = 7.3
Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 3/29 (10%)
Frame = +1
Query: 370 AGIDVCCGE---GQSNLRCNKHERIDGLH 447
AG+ C GE GQ++L C E +DGLH
Sbjct: 243 AGV-YCQGEEWTGQADLFCEWQEYMDGLH 270
>SPAC17D4.04 ||SPAC458.01|tRNA |Schizosaccharomyces pombe|chr
1|||Manual
Length = 654
Score = 24.2 bits (50), Expect = 9.7
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +2
Query: 353 ELYDNLLVSMSAAARDNQIYV 415
E Y+NL SM A DN++++
Sbjct: 399 EKYENLTSSMKTAVDDNKVFL 419
>SPAC3C7.06c |pit1||serine/threonine protein kinase
Pit1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 650
Score = 24.2 bits (50), Expect = 9.7
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -2
Query: 254 RCQHFVLQLLRCGLY 210
RC H V++ L C LY
Sbjct: 108 RCLHIVMEFLDCNLY 122
>SPAC19A8.02 |||transcriptional coactivator |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1213
Score = 24.2 bits (50), Expect = 9.7
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Frame = +2
Query: 65 TYLLRYLIYFSCYLQISFQRSTPQDSHYVAAVVEYQVSRGNVEQN--RLNYISHI--EEA 232
TYL + Y S LQ +S+PQ SH++ R + +N LNY +I E+A
Sbjct: 1089 TYLHPNVTYPSECLQSFALKSSPQKSHWLRKRNYIAEKRKKILENLASLNYYEYIIHEDA 1148
Query: 233 AKQ 241
Q
Sbjct: 1149 VYQ 1151
>SPAC2G11.05c |||BRO1 domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 701
Score = 24.2 bits (50), Expect = 9.7
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -1
Query: 126 DL*NEICK*QEKYIRYRRRY 67
+L N IC+ +E+Y +Y RY
Sbjct: 649 ELYNIICRAEERYSQYENRY 668
>SPAC6F6.02c |pof5||F-box protein Pof5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 348
Score = 24.2 bits (50), Expect = 9.7
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -2
Query: 443 SPSILSCLLQRKFDCPSPQQTSIPANY 363
S S L C+ Q CP+ SIPANY
Sbjct: 237 SRSGLDCIFQL---CPNATTISIPANY 260
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,959,386
Number of Sequences: 5004
Number of extensions: 39236
Number of successful extensions: 128
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 126
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 128
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 172312850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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