Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_D02
         (459 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97017-1|AAB52363.1| 2643|Caenorhabditis elegans Temporarily ass...    32   0.17 
Z83125-8|CAB05623.1|  507|Caenorhabditis elegans Hypothetical pr...    27   6.6  
L16621-12|ABD63203.1|  147|Caenorhabditis elegans Hypothetical p...    27   6.6  
AL132851-1|CAB60411.1|  403|Caenorhabditis elegans Hypothetical ...    27   6.6  
U00032-6|AAA50634.1|  389|Caenorhabditis elegans Hypothetical pr...    27   8.7  
AF003148-5|AAB54209.3|  792|Caenorhabditis elegans Hypothetical ...    27   8.7  

>U97017-1|AAB52363.1| 2643|Caenorhabditis elegans Temporarily assigned
            gene nameprotein 162 protein.
          Length = 2643

 Score = 32.3 bits (70), Expect = 0.17
 Identities = 13/46 (28%), Positives = 26/46 (56%)
 Frame = +2

Query: 317  LLQRYPIPALHPELYDNLLVSMSAAARDNQIYVVINTRELMDCTRN 454
            L+Q+Y   +LH ++    ++ + A A+++ +YVV    E+  C  N
Sbjct: 2007 LIQKYRAHSLHSDIGKKRILKLVADAKNDLVYVVTRQNEVWKCATN 2052


>Z83125-8|CAB05623.1|  507|Caenorhabditis elegans Hypothetical
           protein T15D6.10 protein.
          Length = 507

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +2

Query: 347 HPELYDNLLVSMSAAARDNQIYVVINTRELMDCT 448
           HP LY     +MSA A  +QI V + +  +M  T
Sbjct: 116 HPFLYHTKPSAMSAFAHKDQIVVTLTSENMMHAT 149


>L16621-12|ABD63203.1|  147|Caenorhabditis elegans Hypothetical
           protein ZK688.7 protein.
          Length = 147

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 15/57 (26%), Positives = 25/57 (43%)
 Frame = -1

Query: 396 LAAADIDTSKLSYSSGWRAGIGYRCSRPWIGTAKLVVPFVNVNSGKTTMSAFCFAAS 226
           + ++D+  +  + SSGW A +G      W G  K+     N     TT +  C  A+
Sbjct: 1   MTSSDVIPASTTSSSGWIASVGSAAGWVWDG-MKVTGSVFNDYGTSTTRNTVCTTAT 56


>AL132851-1|CAB60411.1|  403|Caenorhabditis elegans Hypothetical
           protein Y53H1B.1 protein.
          Length = 403

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = +1

Query: 43  RVVCT*NDVSSTISNIFFLLLADLISKIDSARQPLCSCSGR 165
           R  C   +    ++N F + +      ID+AR PLC+ S R
Sbjct: 124 RCTCFYMEADKVVTNKFDVSMLPTTDLIDTARMPLCTYSVR 164


>U00032-6|AAA50634.1|  389|Caenorhabditis elegans Hypothetical
           protein F37A4.6 protein.
          Length = 389

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = -2

Query: 128 SIFEMRSASNRKNILDIVEDTSFYVQTTRLPYPLL*SERE 9
           S+    S+ +R+  L  +EDTS Y +T  L +PL  S ++
Sbjct: 316 SVTSRTSSLDRRMSLSCLEDTSNYQKTQYLVFPLRTSSKK 355


>AF003148-5|AAB54209.3|  792|Caenorhabditis elegans Hypothetical
           protein F32B5.7 protein.
          Length = 792

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 11/37 (29%), Positives = 21/37 (56%)
 Frame = -2

Query: 293 WSSHLLMSIQERQRCQHFVLQLLRCGLYS*DDFVQRY 183
           W +H+L  I  ++ C+  V +++   L S D+  +RY
Sbjct: 120 WHTHMLSPIHYQEDCEKLVGKIIDHKLLSSDEIQKRY 156


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,842,813
Number of Sequences: 27780
Number of extensions: 220752
Number of successful extensions: 628
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 628
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 820565746
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)