Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0006_C11
(576 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_1066 + 30098780-30098866,30099139-30099225,30099318-300994... 188 4e-48
12_02_0028 - 12437332-12437576,12438436-12438537,12438619-124390... 182 2e-46
11_04_0205 + 14860857-14861534,14862585-14862975,14863069-148631... 180 6e-46
01_06_1521 + 37956131-37957204,37958560-37958962,37959370-379594... 165 2e-41
05_04_0394 - 20906923-20907146,20907251-20907340,20908380-209087... 157 4e-39
02_01_0290 - 1944550-1944958,1945235-1945335,1945459-1945719 30 1.1
01_07_0269 - 42414345-42415328,42415419-42415551,42415939-424160... 29 2.7
01_06_0157 + 27075179-27075529,27075849-27076043,27077705-270780... 29 3.5
04_04_0827 - 28457858-28458028,28458513-28458669,28458984-284590... 28 4.6
02_04_0174 - 20607745-20608998 28 6.1
11_01_0596 + 4755453-4755490,4755675-4756047,4757739-4758940,475... 27 8.1
04_04_1152 - 31289365-31289457,31289559-31289637,31289716-312897... 27 8.1
03_02_0594 - 9695616-9696042,9696646-9697260,9697410-9697717,970... 27 8.1
>03_05_1066 +
30098780-30098866,30099139-30099225,30099318-30099439,
30099580-30099656,30100135-30100259,30100497-30100589,
30100840-30100932,30101016-30101213,30101337-30101441,
30101535-30101600,30101808-30101885,30102144-30102233,
30102325-30102448,30102590-30102741
Length = 498
Score = 188 bits (457), Expect = 4e-48
Identities = 91/189 (48%), Positives = 123/189 (65%), Gaps = 1/189 (0%)
Frame = +3
Query: 9 VIFFRKGVRSVKANGQKVMYDFEGKINQAVFPGLQGGPHNHXXXXXXXXMKQATSPEFIE 188
+IF+RKGV+ V G++VMYDFE KIN AVFPGLQGGPHNH +KQAT+PE+
Sbjct: 278 MIFYRKGVKGVNKQGKEVMYDFEDKINAAVFPGLQGGPHNHTITGLAVALKQATTPEYRA 337
Query: 189 YQKQVIKNAQRLCEGLISRGYAIATGGTDVHLALVDLRSVGLTGAPGERILELCSIACNK 368
YQ+QV+ N + + L ++GY + +GGTD HL LV+L+S G+ G+ E++LE IA NK
Sbjct: 338 YQEQVMSNCAKFAQSLTAKGYELVSGGTDNHLVLVNLKSKGIDGSRVEKVLENVHIAANK 397
Query: 369 NTVPGDKSALNPSGVRLGTPALTTRGLKESDIDXVVNYIDQALKIAQTI-VEVSGPKLAD 545
NTVPGD SA+ GTPALT+RG E D V ++ D A+ +A + G KL D
Sbjct: 398 NTVPGDVSAMLHD--HAGTPALTSRGFVEEDFAKVADFFDAAVNLALKVKAAAGGTKLKD 455
Query: 546 FNKAIEENS 572
F ++ +S
Sbjct: 456 FVATLQSDS 464
>12_02_0028 -
12437332-12437576,12438436-12438537,12438619-12439009,
12439996-12440532
Length = 424
Score = 182 bits (443), Expect = 2e-46
Identities = 89/192 (46%), Positives = 121/192 (63%), Gaps = 1/192 (0%)
Frame = +3
Query: 3 AGVIFFRKGVRSVK-ANGQKVMYDFEGKINQAVFPGLQGGPHNHXXXXXXXXMKQATSPE 179
+G+IF+RKG++ K + +YD+E +IN AVFP LQGGPHNH +KQ SP
Sbjct: 204 SGMIFYRKGLKPPKKGQPEGALYDYEDRINFAVFPSLQGGPHNHQIAALAVGLKQTMSPG 263
Query: 180 FIEYQKQVIKNAQRLCEGLISRGYAIATGGTDVHLALVDLRSVGLTGAPGERILELCSIA 359
F Y KQV NA L L+S+GY + T GT+ HL L DLR +GLTG E++ +LCSI
Sbjct: 264 FKSYIKQVKANAVALGNHLMSKGYKLVTDGTENHLVLWDLRPLGLTGNKVEKVCDLCSIT 323
Query: 360 CNKNTVPGDKSALNPSGVRLGTPALTTRGLKESDIDXVVNYIDQALKIAQTIVEVSGPKL 539
NKN V GD SA++P GVR+GTPA+T+RGL E D + ++ QA+ I + + G L
Sbjct: 324 LNKNAVFGDSSAMSPGGVRIGTPAMTSRGLVEEDFVQIAEFLHQAVTICLDVQKERGKLL 383
Query: 540 ADFNKAIEENSE 575
FN+ +E N +
Sbjct: 384 KYFNEGLENNKD 395
>11_04_0205 +
14860857-14861534,14862585-14862975,14863069-14863170,
14863438-14863682
Length = 471
Score = 180 bits (439), Expect = 6e-46
Identities = 90/192 (46%), Positives = 121/192 (63%), Gaps = 1/192 (0%)
Frame = +3
Query: 3 AGVIFFRKGVRSVK-ANGQKVMYDFEGKINQAVFPGLQGGPHNHXXXXXXXXMKQATSPE 179
AG+IF+RKG + K + +YD+E KIN AVFP LQGGPHNH ++Q +P
Sbjct: 251 AGMIFYRKGPKPPKKGQPEGAVYDYEDKINFAVFPSLQGGPHNHQIAALAVALQQTMTPG 310
Query: 180 FIEYQKQVIKNAQRLCEGLISRGYAIATGGTDVHLALVDLRSVGLTGAPGERILELCSIA 359
F Y KQV NA + + L+S+GY + T GT+ HL L DLR +GLTG E++ +LCSI
Sbjct: 311 FKAYAKQVKANAVAIGKYLMSKGYKMVTDGTENHLVLWDLRPLGLTGNKVEKMCDLCSIT 370
Query: 360 CNKNTVPGDKSALNPSGVRLGTPALTTRGLKESDIDXVVNYIDQALKIAQTIVEVSGPKL 539
NKN V GD SAL P GVR+GTPA+T+RGL E D + + ++ QA+ I I + G L
Sbjct: 371 LNKNAVFGDSSALAPGGVRIGTPAMTSRGLVEKDFEQIGEFLHQAVTICLNIQKEHGKLL 430
Query: 540 ADFNKAIEENSE 575
DF+K + N +
Sbjct: 431 KDFSKGLVNNKD 442
>01_06_1521 +
37956131-37957204,37958560-37958962,37959370-37959471,
37959569-37959792
Length = 600
Score = 165 bits (402), Expect = 2e-41
Identities = 80/195 (41%), Positives = 117/195 (60%), Gaps = 5/195 (2%)
Frame = +3
Query: 6 GVIFFRKGVRSVKANGQKVM-----YDFEGKINQAVFPGLQGGPHNHXXXXXXXXMKQAT 170
G+IFFR+G + G YDFE +IN AVFP +QGGPHN+ +KQ
Sbjct: 384 GIIFFRRGKNLRRRTGSFSQADENDYDFEDRINFAVFPSMQGGPHNNHIAALAITLKQVA 443
Query: 171 SPEFIEYQKQVIKNAQRLCEGLISRGYAIATGGTDVHLALVDLRSVGLTGAPGERILELC 350
+PE+ Y QV KNAQ L L+ R + TGGTD HL L DLR++GLTG E++ E C
Sbjct: 444 TPEYKAYIIQVKKNAQALASALLRRKCRLVTGGTDNHLVLWDLRNLGLTGKNFEKVCEAC 503
Query: 351 SIACNKNTVPGDKSALNPSGVRLGTPALTTRGLKESDIDXVVNYIDQALKIAQTIVEVSG 530
I+ NK + GD +++P GVR+GTPA+TTRG E D + + +++ +A +IA +++ G
Sbjct: 504 HISINKMPIYGDNGSISPGGVRIGTPAMTTRGCLEDDFEVIADFLIRATQIASNLMKEHG 563
Query: 531 PKLADFNKAIEENSE 575
+F + ++ N +
Sbjct: 564 KMQKEFLRGLQNNKD 578
>05_04_0394 -
20906923-20907146,20907251-20907340,20908380-20908785,
20909264-20910247
Length = 567
Score = 157 bits (382), Expect = 4e-39
Identities = 84/196 (42%), Positives = 113/196 (57%), Gaps = 6/196 (3%)
Frame = +3
Query: 6 GVIFFRKGVRSVKANG------QKVMYDFEGKINQAVFPGLQGGPHNHXXXXXXXXMKQA 167
G+IFFRKG K G + YDFE +IN AVFP +QGGPHN+ +KQ
Sbjct: 354 GIIFFRKGKNLRKRVGSLTQVVENDQYDFEDRINFAVFPSMQGGPHNNHIAALAIALKQV 413
Query: 168 TSPEFIEYQKQVIKNAQRLCEGLISRGYAIATGGTDVHLALVDLRSVGLTGAPGERILEL 347
PEF Y +QV KNAQ L L+ R + TGGTD HL L DLR+ GLTG E++ E
Sbjct: 414 AMPEFKAYIQQVKKNAQALAMALLRRKCRLVTGGTDNHLMLWDLRTFGLTGKNFEKVCEA 473
Query: 348 CSIACNKNTVPGDKSALNPSGVRLGTPALTTRGLKESDIDXVVNYIDQALKIAQTIVEVS 527
C I+ NK + GD +++P GTPA+TTRG ESD + + ++ +A IA +++
Sbjct: 474 CHISLNKTPIYGDNGSISPG----GTPAMTTRGCLESDFEIMAEFLLRAAHIASIVLKEH 529
Query: 528 GPKLADFNKAIEENSE 575
G DF K +E N++
Sbjct: 530 GRLQKDFLKGLENNND 545
>02_01_0290 - 1944550-1944958,1945235-1945335,1945459-1945719
Length = 256
Score = 30.3 bits (65), Expect = 1.1
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +2
Query: 5 WGHILPQGSSLGQSERAESDVRFRREDQPGRIPGASGRSSQPRHSRD-SDCYEAGD 169
WG L G E + + R+ PG + GA+ R +P +RD C E G+
Sbjct: 8 WGRRLSARRRSGDGEESAEEARW----MPGAVEGAAERGIEPSRARDRGGCEERGE 59
>01_07_0269 -
42414345-42415328,42415419-42415551,42415939-42416007,
42416459-42416672,42416785-42417040
Length = 551
Score = 29.1 bits (62), Expect = 2.7
Identities = 18/55 (32%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
Frame = +2
Query: 80 EDQPGR--IPGASGRSSQPRHSRDSDCYEAGDFARIYRVPKTGDKECSTPMRRSN 238
EDQ G+ P A G + S C E G+ YR P CS P +S+
Sbjct: 3 EDQGGKPPAPDAGGGGGGGESKKGSPCEECGEQPWKYRCPGCSRLTCSLPCVQSH 57
>01_06_0157 +
27075179-27075529,27075849-27076043,27077705-27078036,
27078157-27078577
Length = 432
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +3
Query: 378 PGDKSALNPSGVRLGTPALTTRGLKESDIDXVVNYIDQAL 497
P +A+NPSG +LGT + + D V +Y DQ L
Sbjct: 255 PSRIAAVNPSGYQLGTDFIANNQVPGIDFATVHSYPDQWL 294
>04_04_0827 -
28457858-28458028,28458513-28458669,28458984-28459083,
28459204-28459231,28459321-28459396,28461276-28461355,
28461642-28461805,28461897-28462056,28462154-28462277,
28462901-28463941,28464141-28464259,28464512-28464823,
28465222-28465425,28466068-28466751,28467301-28467474
Length = 1197
Score = 28.3 bits (60), Expect = 4.6
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = -3
Query: 502 ILSAWSI*FTTXSMSLSLRPLVVSAGVPSLTPLGLRALLSPGTVFLLQAILHSSRIR 332
+L + T S+ LR L +PS+TP G + S + LL+ LH+ +R
Sbjct: 181 VLEGYFCSLNTLPASIKLRRLEGQPDIPSMTPDG-ASYNSNSEITLLEVYLHTEELR 236
>02_04_0174 - 20607745-20608998
Length = 417
Score = 27.9 bits (59), Expect = 6.1
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -3
Query: 340 RIRSPGAPVSPTLRKSTSARCTSVPPV 260
RI +P P P L +S A+C ++PP+
Sbjct: 96 RIPTPKQPADPDLIRSLLAQCPALPPL 122
>11_01_0596 +
4755453-4755490,4755675-4756047,4757739-4758940,
4759026-4759392
Length = 659
Score = 27.5 bits (58), Expect = 8.1
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +2
Query: 191 PKTGDKECSTPMRRSNFSGL 250
P TGD +T RRS F+GL
Sbjct: 554 PSTGDTSATTTARRSKFAGL 573
>04_04_1152 -
31289365-31289457,31289559-31289637,31289716-31289758,
31289846-31290037,31290302-31290377,31290482-31290535,
31291274-31291342,31291437-31291700
Length = 289
Score = 27.5 bits (58), Expect = 8.1
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +2
Query: 35 LGQSERAESDVRFRREDQPGRIPGASGRSSQPRHSRDSDCYEAGDFAR 178
L +RAE+D+R R D R+ A +++ RDS A AR
Sbjct: 60 LADRDRAEADLRARLADSDARLLAALDENAKLAKERDSLASTAKKMAR 107
>03_02_0594 - 9695616-9696042,9696646-9697260,9697410-9697717,
9700145-9700235,9700698-9700759,9701256-9702962,
9703789-9703870,9703972-9704057,9704855-9704968,
9705113-9705163,9705261-9705358,9707084-9707546
Length = 1367
Score = 27.5 bits (58), Expect = 8.1
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +2
Query: 44 SERAESDVRFRREDQPGRIPGASGRSSQPRHSRDSD 151
SER + R+D+P +P G S + RD D
Sbjct: 1224 SERTHGTLPCSRDDEPVHVPSDFGSSKSQDNQRDED 1259
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,388,706
Number of Sequences: 37544
Number of extensions: 313895
Number of successful extensions: 973
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 942
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 968
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1340735508
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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