Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_C07
         (584 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF322907-1|AAK92049.1| 2596|Homo sapiens NSD1 protein.                 31   2.3  
BC001940-1|AAH01940.2|  748|Homo sapiens hypothetical protein DK...    31   3.0  
AK074809-1|BAC11221.1|  748|Homo sapiens protein ( Homo sapiens ...    31   3.0  
AB162218-1|BAD36741.1|  748|Homo sapiens hFLEG1 protein.               31   3.0  
AF113616-1|AAF13032.1| 1217|Homo sapiens intestinal mucin 3 prot...    30   5.2  
AF007194-1|AAC02272.1|  957|Homo sapiens mucin protein.                30   5.2  
AF179681-1|AAF72107.1| 1156|Homo sapiens unknown protein.              30   6.9  

>AF322907-1|AAK92049.1| 2596|Homo sapiens NSD1 protein.
          Length = 2596

 Score = 31.5 bits (68), Expect = 2.3
 Identities = 17/57 (29%), Positives = 26/57 (45%)
 Frame = +1

Query: 337  PRSKSHGYTHPPVRRQGDSCRPSESLPPTITTTSQRRLSPPEICQISLMYPTSTLSG 507
            PR+   G    P++  G +  PSE     + + +Q RLS     +  L  PT+  SG
Sbjct: 2398 PRAVEKGCVSDPLQTSGKAAAPSEDPWQAVKSLTQARLSSQPSAKAFLYEPTTQASG 2454


>BC001940-1|AAH01940.2|  748|Homo sapiens hypothetical protein
           DKFZp762E1312 protein.
          Length = 748

 Score = 31.1 bits (67), Expect = 3.0
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = -3

Query: 354 VRLTPWPFTLSSATPAVAAPSFCLLVKSKEP 262
           VR+TP P   S A+PAV AP +C  +  K P
Sbjct: 175 VRVTPLP---SLASPAVPAPGYCSRISGKSP 202


>AK074809-1|BAC11221.1|  748|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90328 fis, clone NT2RP2001921. ).
          Length = 748

 Score = 31.1 bits (67), Expect = 3.0
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = -3

Query: 354 VRLTPWPFTLSSATPAVAAPSFCLLVKSKEP 262
           VR+TP P   S A+PAV AP +C  +  K P
Sbjct: 175 VRVTPLP---SLASPAVPAPGYCSRISGKSP 202


>AB162218-1|BAD36741.1|  748|Homo sapiens hFLEG1 protein.
          Length = 748

 Score = 31.1 bits (67), Expect = 3.0
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = -3

Query: 354 VRLTPWPFTLSSATPAVAAPSFCLLVKSKEP 262
           VR+TP P   S A+PAV AP +C  +  K P
Sbjct: 175 VRVTPLP---SLASPAVPAPGYCSRISGKSP 202


>AF113616-1|AAF13032.1| 1217|Homo sapiens intestinal mucin 3
           protein.
          Length = 1217

 Score = 30.3 bits (65), Expect = 5.2
 Identities = 18/60 (30%), Positives = 30/60 (50%)
 Frame = -3

Query: 330 TLSSATPAVAAPSFCLLVKSKEPIALTIFLSLPAKGTLTPAPEVQSELSVRAPCASLRTL 151
           T S +TP++++ +    V +      + F +  ++  +TP P   S LS   P  SLRTL
Sbjct: 329 TTSESTPSLSSSTIYSTVSTSTTAITSHFTT--SETAVTPTPVTPSSLSTDIPTTSLRTL 386


>AF007194-1|AAC02272.1|  957|Homo sapiens mucin protein.
          Length = 957

 Score = 30.3 bits (65), Expect = 5.2
 Identities = 18/60 (30%), Positives = 30/60 (50%)
 Frame = -3

Query: 330 TLSSATPAVAAPSFCLLVKSKEPIALTIFLSLPAKGTLTPAPEVQSELSVRAPCASLRTL 151
           T S +TP++++ +    V +      + F +  ++  +TP P   S LS   P  SLRTL
Sbjct: 329 TTSESTPSLSSSTIYSTVSTSTTAITSHFTT--SETAVTPTPVTPSSLSTDIPTTSLRTL 386


>AF179681-1|AAF72107.1| 1156|Homo sapiens unknown protein.
          Length = 1156

 Score = 29.9 bits (64), Expect = 6.9
 Identities = 19/72 (26%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
 Frame = -3

Query: 336 PFTLSSATPAVAAPSFCLLVKSKEPIALTIFLSLPAKG-TLTPAPEVQSELSVRAPCASL 160
           P T    TP  + PSF   V  + PI++ +    P    TL P P   + +    P  S 
Sbjct: 492 PLTSDPPTPPSSTPSFKPPVTRESPISMCVDSPPPLSFLTLLPVPSTGTSVITSKPMNST 551

Query: 159 RTLELVNSSGSS 124
             +  V ++ S+
Sbjct: 552 SVISTVTTNASA 563


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,905,359
Number of Sequences: 237096
Number of extensions: 1838487
Number of successful extensions: 4621
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4443
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4614
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6098631048
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)