Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0006_C06
(518 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U46671-2|AAA85748.1| 205|Caenorhabditis elegans Hypothetical pr... 31 0.49
Z99288-10|CAB16552.2| 338|Caenorhabditis elegans Hypothetical p... 31 0.65
Z81483-7|CAB03964.2| 338|Caenorhabditis elegans Hypothetical pr... 31 0.65
AF067937-7|AAN84819.1| 392|Caenorhabditis elegans Hypothetical ... 29 2.0
AF067937-6|AAF99915.1| 426|Caenorhabditis elegans Hypothetical ... 29 2.0
Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z68752-7|CAA92982.2| 693|Caenorhabditis elegans Hypothetical pr... 27 6.1
U13644-7|AAM48536.2| 700|Caenorhabditis elegans Hypothetical pr... 27 6.1
U13644-6|AAB52678.1| 739|Caenorhabditis elegans Hypothetical pr... 27 6.1
AC024805-3|AAK39338.1| 801|Caenorhabditis elegans Hypothetical ... 27 8.0
>U46671-2|AAA85748.1| 205|Caenorhabditis elegans Hypothetical
protein C14E2.3 protein.
Length = 205
Score = 31.1 bits (67), Expect = 0.49
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -3
Query: 399 FAGSCHLSPNPGMCVSVRLTPWP 331
F G CH PNP +C S R+ P
Sbjct: 4 FQGQCHSQPNPAICESCRINTSP 26
>Z99288-10|CAB16552.2| 338|Caenorhabditis elegans Hypothetical
protein ZK262.11 protein.
Length = 338
Score = 30.7 bits (66), Expect = 0.65
Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -1
Query: 491 LKWGTXAISGIFLVA-KAFAVMSWXSLWKRFTLPAAVTFLRTRGCVYP*DLLRG 333
L++ T I+GIF + SW LWK+F P FL + VYP LL G
Sbjct: 108 LQFVTLGITGIFENRFRIICKFSWVPLWKKFITPG---FLPGQYIVYPSFLLLG 158
>Z81483-7|CAB03964.2| 338|Caenorhabditis elegans Hypothetical
protein C43D7.6 protein.
Length = 338
Score = 30.7 bits (66), Expect = 0.65
Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -1
Query: 491 LKWGTXAISGIFLVA-KAFAVMSWXSLWKRFTLPAAVTFLRTRGCVYP*DLLRG 333
L++ T I+GIF + SW LWK+F P FL + VYP LL G
Sbjct: 108 LQFVTLGITGIFENRFRIICKFSWVPLWKKFITPG---FLPGQYIVYPSFLLLG 158
>AF067937-7|AAN84819.1| 392|Caenorhabditis elegans Hypothetical
protein F22F7.1b protein.
Length = 392
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +2
Query: 209 GVKVPFAGNDKNIVSAIGSLDLTNRQ 286
GV VPF G DK+I++ D T+RQ
Sbjct: 237 GVAVPFPGADKSIINRSQYYDATSRQ 262
>AF067937-6|AAF99915.1| 426|Caenorhabditis elegans Hypothetical
protein F22F7.1a protein.
Length = 426
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +2
Query: 209 GVKVPFAGNDKNIVSAIGSLDLTNRQ 286
GV VPF G DK+I++ D T+RQ
Sbjct: 237 GVAVPFPGADKSIINRSQYYDATSRQ 262
>Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical protein
F32H2.5 protein.
Length = 2586
Score = 28.3 bits (60), Expect = 3.5
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +2
Query: 257 IGSLDLTNRQKLGAATAGVALDNVNGHGVSLTDTHIPGFGE 379
IG +DL+ LG A LDNV+ HG+ L P G+
Sbjct: 1832 IGKVDLSQNSSLGMAKL---LDNVSVHGILLDSIMDPTVGD 1869
>Z68752-7|CAA92982.2| 693|Caenorhabditis elegans Hypothetical
protein T12G3.1 protein.
Length = 693
Score = 27.5 bits (58), Expect = 6.1
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = -3
Query: 321 SSATPAVAAPSFCLLVKSKEPIALTIFLSLPAKGTLTPAPEVPSELS--VRAPCASLRTL 148
+SATPAV AP+ + V PI T+ + L P P E++ V AP + +
Sbjct: 534 TSATPAVTAPASIVPVTPTAPIVETLIVP-----PLPPVESNPEEVTPMVTAPISIHSSF 588
Query: 147 ELVNSSGSS 121
E ++S S
Sbjct: 589 ENISSDFES 597
>U13644-7|AAM48536.2| 700|Caenorhabditis elegans Hypothetical
protein F56D2.6b protein.
Length = 700
Score = 27.5 bits (58), Expect = 6.1
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +3
Query: 105 TIFNTMRSLNY*QALESAGTRTELSRSTPMVPLVLELKYPLLVTTRI 245
T+ + LNY QA+ G TEL PL +L L+ +T +
Sbjct: 479 TLMRALELLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLITSTEL 525
>U13644-6|AAB52678.1| 739|Caenorhabditis elegans Hypothetical
protein F56D2.6a protein.
Length = 739
Score = 27.5 bits (58), Expect = 6.1
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +3
Query: 105 TIFNTMRSLNY*QALESAGTRTELSRSTPMVPLVLELKYPLLVTTRI 245
T+ + LNY QA+ G TEL PL +L L+ +T +
Sbjct: 479 TLMRALELLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLITSTEL 525
>AC024805-3|AAK39338.1| 801|Caenorhabditis elegans Hypothetical
protein Y51H7C.6a protein.
Length = 801
Score = 27.1 bits (57), Expect = 8.0
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 77 RYLIVSEPVYYIQHYEEPELLTSSRVRRDAHGAL 178
R L+ +EP+ + +Y+ LLTSS + R +L
Sbjct: 671 RLLVENEPLLFADNYQTLLLLTSSEIARQIEQSL 704
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,753,592
Number of Sequences: 27780
Number of extensions: 237345
Number of successful extensions: 624
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 599
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 624
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1007108110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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