Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_C04
         (609 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF080430-1|AAC28863.2|  208|Apis mellifera ribosomal protein S8 ...    24   1.3  
AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding pr...    23   3.1  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    22   4.1  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    22   4.1  
AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding prote...    22   5.4  
AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-bind...    22   5.4  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   5.4  
DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholi...    21   7.1  

>AF080430-1|AAC28863.2|  208|Apis mellifera ribosomal protein S8
           protein.
          Length = 208

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +1

Query: 376 ESLINFARSKKLFLMEAVWSRFAPSYLALEEEINSG 483
           E ++N  RSKK         RFA    ALEE+  +G
Sbjct: 134 EEVLNKKRSKKAEAKYKARQRFAKVEPALEEQFATG 169


>AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding
           protein protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 10/46 (21%), Positives = 20/46 (43%)
 Frame = +1

Query: 88  KISHDFVNAVNSFPDKRDQTIVXXXXXXXXXXXXXXXTHKIPKVYE 225
           K++  F   + S PD++ QT+                + K+ ++YE
Sbjct: 64  KMNVPFEETLPSLPDRKFQTVTSIEGNTFKTETQVNDSLKVTRLYE 109


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -1

Query: 132 VGK*VDSINKIMRYLPCCYY 73
           V +  D I  ++ Y PCC++
Sbjct: 472 VNRFYDGIRDMIGYYPCCWW 491


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -1

Query: 132 VGK*VDSINKIMRYLPCCYY 73
           V +  D I  ++ Y PCC++
Sbjct: 525 VNRFYDGIRDMIGYYPCCWW 544


>AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding protein
           ASP2 protein.
          Length = 142

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 6/20 (30%), Positives = 14/20 (70%)
 Frame = -1

Query: 555 QSNSRNVNDRYTVCYFYELY 496
           +++  N+ ++YT CY  +L+
Sbjct: 122 ETDECNIGNKYTDCYIEKLF 141


>AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-binding
           protein ASP2 protein.
          Length = 142

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 6/20 (30%), Positives = 14/20 (70%)
 Frame = -1

Query: 555 QSNSRNVNDRYTVCYFYELY 496
           +++  N+ ++YT CY  +L+
Sbjct: 122 ETDECNIGNKYTDCYIEKLF 141


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -3

Query: 220  KLWVFYECRQ 191
            K+W+F+ CRQ
Sbjct: 1001 KVWLFFGCRQ 1010


>DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholine
           receptor alpha3subunit protein.
          Length = 566

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 9/28 (32%), Positives = 11/28 (39%)
 Frame = +2

Query: 164 PVTSAMPVRLPALIKYPKFTNPTKQWPH 247
           P T+A P +LP         N    W H
Sbjct: 448 PATTAAPPQLPTEESVDALCNTLHHWHH 475


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,636
Number of Sequences: 438
Number of extensions: 3976
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17971191
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)