Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_C03
         (565 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132865-4|CAB60604.1|  458|Caenorhabditis elegans Hypothetical ...    31   0.76 
AF039719-12|AAB96758.1|  293|Caenorhabditis elegans Hypothetical...    29   1.7  
U55376-1|AAA98003.1|  434|Caenorhabditis elegans Hypothetical pr...    28   4.0  
Z82282-4|CAB05276.1|  485|Caenorhabditis elegans Hypothetical pr...    28   5.3  
Z82282-2|CAB05274.2|  544|Caenorhabditis elegans Hypothetical pr...    28   5.3  
Z79596-4|CAB01856.2|  554|Caenorhabditis elegans Hypothetical pr...    28   5.3  
Z79596-3|CAI79132.1|  561|Caenorhabditis elegans Hypothetical pr...    28   5.3  
AL110485-29|CAB60376.3|  732|Caenorhabditis elegans Hypothetical...    28   5.3  
AF016425-1|AAD34668.1|  458|Caenorhabditis elegans Hypothetical ...    28   5.3  
Z82267-3|CAB05191.1|  186|Caenorhabditis elegans Hypothetical pr...    27   9.3  
U41995-11|AAA83467.1|  665|Caenorhabditis elegans Hypothetical p...    27   9.3  
AC024856-1|ABB51172.1|  334|Caenorhabditis elegans Hypothetical ...    27   9.3  

>AL132865-4|CAB60604.1|  458|Caenorhabditis elegans Hypothetical
           protein Y62E10A.6 protein.
          Length = 458

 Score = 30.7 bits (66), Expect = 0.76
 Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
 Frame = -2

Query: 531 LNEWCIELLPTGVEVKRRGGRLEKIQFSAQRVV-VAVKDIGVCGGRRCTNFIFEHV 367
           + +W  +L  + ++ K     L K++   +R+  V VK+IG+  G R  +FIF  +
Sbjct: 235 IKDWDSKLEISEIDAKNLTESLPKLERKKKRLTEVLVKNIGIANGLRQCHFIFHRI 290


>AF039719-12|AAB96758.1|  293|Caenorhabditis elegans Hypothetical
           protein K04F10.7 protein.
          Length = 293

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = +3

Query: 285 QCQSIRH*KHAKYSSSSELQHCRCRSGLHVQR*NWC 392
           QCQ  +    AKY      Q+C+  +  H Q+  WC
Sbjct: 25  QCQKCQK-NEAKYGKPGTCQYCKLNAAFHDQKCVWC 59


>U55376-1|AAA98003.1|  434|Caenorhabditis elegans Hypothetical
           protein F16H11.3 protein.
          Length = 434

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -1

Query: 115 EPRALSLWFSLPVMGTLTIAPEVPSELI 32
           +P  +  W+S   MG+LTIA ++P+  I
Sbjct: 57  KPDGVETWYSKEFMGSLTIASQLPNASI 84


>Z82282-4|CAB05276.1|  485|Caenorhabditis elegans Hypothetical
           protein T07G12.4 protein.
          Length = 485

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 12/34 (35%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
 Frame = -2

Query: 534 GLNEWCIELLPTGVEVKRRG--GRLEKIQFSAQR 439
           GL  +C++++ +G   K+RG   +LEKI+ S ++
Sbjct: 403 GLIAFCLDIIASGATRKQRGFEDKLEKIEISVEK 436


>Z82282-2|CAB05274.2|  544|Caenorhabditis elegans Hypothetical
           protein T07G12.2 protein.
          Length = 544

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 12/34 (35%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
 Frame = -2

Query: 534 GLNEWCIELLPTGVEVKRRG--GRLEKIQFSAQR 439
           GL  +C++++ +G   K+RG   +LEKI+ S ++
Sbjct: 465 GLIAFCLDIIASGATRKQRGFEDKLEKIEISVEK 498


>Z79596-4|CAB01856.2|  554|Caenorhabditis elegans Hypothetical
           protein C02C6.2b protein.
          Length = 554

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 25/91 (27%), Positives = 42/91 (46%)
 Frame = -2

Query: 489 VKRRGGRLEKIQFSAQRVVVAVKDIGVCGGRRCTNFIFEHVVHSGTDSVEVRNLRNIWHV 310
           ++ +  RL  +Q  A+RVV  VK +     + C N+  + VV   T  +++  L +I   
Sbjct: 224 MRSKNNRLPYLQIRARRVVRNVKSLAAQTIKVCKNYATKTVV---TGLIDLTVLLSISFA 280

Query: 309 FSGECFGTEIVVVVMEEIYFTGSRHFVTEPR 217
           F        +V ++M  I F G  + V E R
Sbjct: 281 FPALPLFYILVPLLMLNIVFFGVIYKVQELR 311


>Z79596-3|CAI79132.1|  561|Caenorhabditis elegans Hypothetical
           protein C02C6.2a protein.
          Length = 561

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 25/91 (27%), Positives = 42/91 (46%)
 Frame = -2

Query: 489 VKRRGGRLEKIQFSAQRVVVAVKDIGVCGGRRCTNFIFEHVVHSGTDSVEVRNLRNIWHV 310
           ++ +  RL  +Q  A+RVV  VK +     + C N+  + VV   T  +++  L +I   
Sbjct: 231 MRSKNNRLPYLQIRARRVVRNVKSLAAQTIKVCKNYATKTVV---TGLIDLTVLLSISFA 287

Query: 309 FSGECFGTEIVVVVMEEIYFTGSRHFVTEPR 217
           F        +V ++M  I F G  + V E R
Sbjct: 288 FPALPLFYILVPLLMLNIVFFGVIYKVQELR 318


>AL110485-29|CAB60376.3|  732|Caenorhabditis elegans Hypothetical
           protein Y46G5A.10 protein.
          Length = 732

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 11/26 (42%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
 Frame = +2

Query: 353 VPEWTTCSKIKL-VHLRPPHTPMSLT 427
           V E   C K+K+ V+ +PPH P+ +T
Sbjct: 258 VREKKNCDKLKINVYFKPPHPPVEIT 283


>AF016425-1|AAD34668.1|  458|Caenorhabditis elegans Hypothetical
           protein F59A7.1 protein.
          Length = 458

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 4/27 (14%)
 Frame = +1

Query: 208 THIP----GFGDKMTAAGKVNLFHNNN 276
           +H+P    GFGDK T +  +  F+NNN
Sbjct: 237 SHLPDPRLGFGDKTTGSDSLQKFYNNN 263


>Z82267-3|CAB05191.1|  186|Caenorhabditis elegans Hypothetical
           protein F38C2.5 protein.
          Length = 186

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +1

Query: 316 PNIPQVPNFNTVGAGVDYMFKDKIGASATAAHTD 417
           P +PQ  ++    +G+   F D  GASA+++ TD
Sbjct: 151 PLMPQFSSWFAPSSGLSREFLDNFGASASSSSTD 184


>U41995-11|AAA83467.1|  665|Caenorhabditis elegans Hypothetical
           protein E02C12.10 protein.
          Length = 665

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 18/38 (47%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
 Frame = +1

Query: 220 GFG-DKMTAAGKVNL-FHNNNHDFSAKAFATKNMPNIP 327
           GFG DK+   GK    FHN   D S K     N PNIP
Sbjct: 514 GFGEDKLKRLGKTTREFHNREVD-SYKLLMRYNHPNIP 550


>AC024856-1|ABB51172.1|  334|Caenorhabditis elegans Hypothetical
           protein Y71G10AR.4 protein.
          Length = 334

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 10/27 (37%), Positives = 20/27 (74%)
 Frame = -1

Query: 136 IWLVRSTEPRALSLWFSLPVMGTLTIA 56
           +W+VRS E R L+++F + V+  +++A
Sbjct: 169 VWVVRSKESRRLTVYFVISVVVLISMA 195


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,149,843
Number of Sequences: 27780
Number of extensions: 305202
Number of successful extensions: 732
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 715
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 732
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1166125180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)