Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_B15
         (636 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    23   1.9  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       23   2.5  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    22   4.3  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    21   7.6  

>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +1

Query: 217 IDCIVDDIPNNVMDTYCWI 273
           +D ++D  PNN  +TY +I
Sbjct: 173 VDLVIDVDPNNCDNTYAYI 191


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = -1

Query: 459 HFPQVARNVKQDRLKE 412
           +F +VARN K+D LKE
Sbjct: 425 NFYEVARNKKKDLLKE 440


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +1

Query: 175 CSLLVTSKQYIGDPIDCIVDD 237
           C   + SK+Y+     CI+D+
Sbjct: 188 CGATIISKRYVLTAAHCIIDE 208


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/22 (36%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
 Frame = +1

Query: 226 IVD-DIPNNVMDTYCWIHSTFT 288
           I+D D  N ++ T CW+   +T
Sbjct: 42  IIDVDEKNQILTTNCWVTQIWT 63


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,556
Number of Sequences: 438
Number of extensions: 3622
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19071468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)