Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0006_B14
(102 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 21 1.1
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 21 1.8
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 21 1.8
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 21 1.8
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 21 1.8
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 21 1.8
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 21 1.8
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 21 1.8
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 21 1.8
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 21 1.8
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 21 1.8
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 21 1.8
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 21 1.8
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 21 1.8
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 21 1.8
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 21 1.8
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 21 1.8
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 20 2.4
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 20 2.4
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 20 2.4
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 19 4.3
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 19 4.3
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 19 4.3
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 19 5.6
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 19 5.6
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 18 9.9
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 18 9.9
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 18 9.9
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 18 9.9
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 21.4 bits (43), Expect = 1.1
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +3
Query: 18 AGIRHEGPLSNNP 56
AG+R+ GP N P
Sbjct: 426 AGLRYRGPKQNKP 438
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 20.6 bits (41), Expect = 1.8
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3
Query: 21 GIRHEGPLSNNPP 59
G RH GPL+ PP
Sbjct: 118 GSRHIGPLTPFPP 130
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 20.6 bits (41), Expect = 1.8
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3
Query: 21 GIRHEGPLSNNPP 59
G RH GPL+ PP
Sbjct: 118 GSRHIGPLTPFPP 130
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 20.6 bits (41), Expect = 1.8
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3
Query: 21 GIRHEGPLSNNPP 59
G RH GPL+ PP
Sbjct: 118 GSRHIGPLTPFPP 130
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 20.6 bits (41), Expect = 1.8
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3
Query: 21 GIRHEGPLSNNPP 59
G RH GPL+ PP
Sbjct: 118 GSRHIGPLTPFPP 130
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 20.6 bits (41), Expect = 1.8
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3
Query: 21 GIRHEGPLSNNPP 59
G RH GPL+ PP
Sbjct: 118 GSRHIGPLTPFPP 130
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 20.6 bits (41), Expect = 1.8
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3
Query: 21 GIRHEGPLSNNPP 59
G RH GPL+ PP
Sbjct: 118 GSRHIGPLTPFPP 130
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 20.6 bits (41), Expect = 1.8
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3
Query: 21 GIRHEGPLSNNPP 59
G RH GPL+ PP
Sbjct: 118 GSRHIGPLTPFPP 130
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.6 bits (41), Expect = 1.8
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3
Query: 21 GIRHEGPLSNNPP 59
G RH GPL+ PP
Sbjct: 367 GSRHIGPLTPFPP 379
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.6 bits (41), Expect = 1.8
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3
Query: 21 GIRHEGPLSNNPP 59
G RH GPL+ PP
Sbjct: 367 GSRHIGPLTPFPP 379
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.6 bits (41), Expect = 1.8
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3
Query: 21 GIRHEGPLSNNPP 59
G RH GPL+ PP
Sbjct: 367 GSRHIGPLTPFPP 379
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.6 bits (41), Expect = 1.8
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3
Query: 21 GIRHEGPLSNNPP 59
G RH GPL+ PP
Sbjct: 367 GSRHIGPLTPFPP 379
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.6 bits (41), Expect = 1.8
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3
Query: 21 GIRHEGPLSNNPP 59
G RH GPL+ PP
Sbjct: 367 GSRHIGPLTPFPP 379
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.6 bits (41), Expect = 1.8
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3
Query: 21 GIRHEGPLSNNPP 59
G RH GPL+ PP
Sbjct: 367 GSRHIGPLTPFPP 379
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 20.6 bits (41), Expect = 1.8
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3
Query: 21 GIRHEGPLSNNPP 59
G RH GPL+ PP
Sbjct: 366 GSRHIGPLTPFPP 378
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 20.6 bits (41), Expect = 1.8
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3
Query: 21 GIRHEGPLSNNPP 59
G RH GPL+ PP
Sbjct: 351 GSRHIGPLTPFPP 363
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 20.6 bits (41), Expect = 1.8
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3
Query: 21 GIRHEGPLSNNPP 59
G RH GPL+ PP
Sbjct: 367 GSRHIGPLTPFPP 379
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 20.2 bits (40), Expect = 2.4
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -2
Query: 95 LKGGNAMVATRGRRVVTQ 42
L G + AT+GR V+T+
Sbjct: 187 LTGETRLSATKGRLVITE 204
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 20.2 bits (40), Expect = 2.4
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +3
Query: 12 GAAGIRHEGPLSNNPPATRGD 74
GAAG + + P PP R D
Sbjct: 67 GAAGSQQDMPYPRFPPYNRMD 87
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 20.2 bits (40), Expect = 2.4
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +3
Query: 3 GSPGAAGIRHE 35
GSPG+ GIR +
Sbjct: 286 GSPGSGGIRSD 296
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 19.4 bits (38), Expect = 4.3
Identities = 6/9 (66%), Positives = 6/9 (66%)
Frame = +3
Query: 54 PPATRGDHG 80
PP GDHG
Sbjct: 334 PPGVPGDHG 342
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 19.4 bits (38), Expect = 4.3
Identities = 6/9 (66%), Positives = 6/9 (66%)
Frame = +3
Query: 54 PPATRGDHG 80
PP GDHG
Sbjct: 334 PPGVPGDHG 342
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 19.4 bits (38), Expect = 4.3
Identities = 6/9 (66%), Positives = 6/9 (66%)
Frame = +3
Query: 54 PPATRGDHG 80
PP GDHG
Sbjct: 273 PPGVPGDHG 281
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 19.0 bits (37), Expect = 5.6
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -1
Query: 39 DPRAEFLQRRGIQ 1
DP EF +RR +Q
Sbjct: 149 DPVKEFWERRALQ 161
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 19.0 bits (37), Expect = 5.6
Identities = 5/7 (71%), Positives = 5/7 (71%)
Frame = +2
Query: 68 WRPWHFP 88
WR W FP
Sbjct: 862 WRHWKFP 868
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 18.2 bits (35), Expect = 9.9
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -1
Query: 39 DPRAEFLQRRGIQ 1
DP EF +RR +Q
Sbjct: 182 DPVKEFWERRTLQ 194
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 18.2 bits (35), Expect = 9.9
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -1
Query: 39 DPRAEFLQRRGIQ 1
DP EF +RR +Q
Sbjct: 235 DPVKEFWERRTLQ 247
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 18.2 bits (35), Expect = 9.9
Identities = 7/25 (28%), Positives = 11/25 (44%)
Frame = -1
Query: 99 RS*GGKCHGRHAWQAGCYSADPRAE 25
+S G K G H+W+ + E
Sbjct: 695 QSHGIKRSGSHSWEGDSFKVSKHEE 719
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 18.2 bits (35), Expect = 9.9
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +3
Query: 39 PLSNNPPATRGDHGISPLKN 98
P S + PA+ D G+S +++
Sbjct: 236 PGSGSLPASPADSGVSDVES 255
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,681
Number of Sequences: 438
Number of extensions: 405
Number of successful extensions: 29
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 146,343
effective HSP length: 14
effective length of database: 140,211
effective search space used: 2664009
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
- SilkBase 1999-2023 -