Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_B12
         (637 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    26   0.35 
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    25   0.81 
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              25   0.81 
DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex det...    24   1.1  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    24   1.1  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   2.5  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   2.5  
DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    22   4.3  
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    22   5.7  

>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 25.8 bits (54), Expect = 0.35
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +1

Query: 454 YCTKHGSGCFSVSIINRINYMYCLLD 531
           YC  H     +V I+N +N +Y   D
Sbjct: 423 YCAAHTDSSGAVKIVNMLNQLYTAFD 448


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 24.6 bits (51), Expect = 0.81
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +1

Query: 454 YCTKHGSGCFSVSIINRINYMYCLLD 531
           YC  H     ++ I+N +N +Y   D
Sbjct: 423 YCAAHTDSSGAMKIVNMLNQLYTAFD 448


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 24.6 bits (51), Expect = 0.81
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +1

Query: 445 HTNYCTKHGSGCFSVSIINRINYMYCL 525
           + N+C  H + C S S + +   M CL
Sbjct: 125 YANHCELHRAACHSGSSLTKSRLMRCL 151


>DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -1

Query: 490 ILKNTHYHV*YNNLCEKAYNTLANYL 413
           I  N +Y   YNN C+K Y  + NY+
Sbjct: 90  IHNNNNYKYNYNNNCKKLYYNI-NYI 114


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -1

Query: 481 NTHYHV*YNNLCEKAYNTLAN 419
           N +Y+  YNN C+K Y  + N
Sbjct: 340 NNNYNNNYNNNCKKLYYNIIN 360


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = -1

Query: 235 KLLQLQYKVITYSQHKE*EV 176
           +++Q+  K I Y+QHKE E+
Sbjct: 321 RIIQITPKRIQYAQHKENEL 340


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = -1

Query: 235 KLLQLQYKVITYSQHKE*EV 176
           +++Q+  K I Y+QHKE E+
Sbjct: 359 RIIQITPKRIQYAQHKENEL 378


>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -2

Query: 351 WFSNTRHIFLKSKFGKIYI 295
           W S+     LKSK G++++
Sbjct: 340 WISSVTESVLKSKIGQVFL 358


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -3

Query: 95  NTFYFRFKKFIYNLIGIYRV 36
           N  Y  +KK  YN+I I ++
Sbjct: 343 NNNYNNYKKLYYNIINIEQI 362


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,894
Number of Sequences: 438
Number of extensions: 3859
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19071468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)