Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_B09
         (583 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    27   0.18 
DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.              23   2.2  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    23   2.2  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        22   3.8  
DQ494417-1|ABF55368.1|   42|Apis mellifera telomerase reverse tr...    21   6.7  
DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    21   6.7  
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    21   6.7  
AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    21   6.7  
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    21   6.7  

>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 26.6 bits (56), Expect = 0.18
 Identities = 16/59 (27%), Positives = 27/59 (45%)
 Frame = +2

Query: 65  WSCNSETVRSAPRLPNSCRKKRN*TSQRSRSMRNSKWAQTPMSPSRSDNRRQLRTNRKK 241
           +SC+ E  + + +  NS RK R  + +RSR     + ++ P   S   N+     N  K
Sbjct: 272 YSCSREREQKSYKNENSYRKYRETSKERSRDRTERERSREPKIISSLSNKTIHNNNNYK 330


>DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.
          Length = 145

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 8/37 (21%), Positives = 20/37 (54%)
 Frame = +2

Query: 74  NSETVRSAPRLPNSCRKKRN*TSQRSRSMRNSKWAQT 184
           + E + +A  + N+C+ +    +    ++RN +W +T
Sbjct: 30  SDEMIATAASVVNACQTQTGVATVDIEAVRNGQWPET 66


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -3

Query: 278 DEDVNLFELFDGFSYDLFAAAVC 210
           D DV+  EL  G+S  +  AA+C
Sbjct: 123 DHDVDKDELITGWSAVVITAAIC 145


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/33 (30%), Positives = 14/33 (42%)
 Frame = +3

Query: 366 PYKLTQQCLHHLKKTKGNVVNVFGAPMRVRPGF 464
           PY       HH ++ +      FGA   + PGF
Sbjct: 90  PYVSAAAAHHHHQQQQAVAAAAFGATSSMVPGF 122


>DQ494417-1|ABF55368.1|   42|Apis mellifera telomerase reverse
           transcriptase protein.
          Length = 42

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = +3

Query: 381 QQCLHHLKKTKGNVVNVF 434
           Q CLHH    K N  N F
Sbjct: 20  QYCLHHKILIKKNKCNAF 37


>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/22 (36%), Positives = 16/22 (72%)
 Frame = +2

Query: 224 RTNRKKNHRTIQKD*HPHQLRR 289
           RTNRK+N R+ +++ + ++  R
Sbjct: 32  RTNRKRNSRSREREQNSYKNER 53


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/22 (36%), Positives = 16/22 (72%)
 Frame = +2

Query: 224 RTNRKKNHRTIQKD*HPHQLRR 289
           RTNRK+N R+ +++ + ++  R
Sbjct: 32  RTNRKRNSRSREREQNSYKNER 53


>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 5/16 (31%), Positives = 10/16 (62%)
 Frame = -1

Query: 409 VFFRWCKHCWVSLYGT 362
           + ++   HCW ++Y T
Sbjct: 251 ILYKSTLHCWATIYKT 266


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 5/16 (31%), Positives = 10/16 (62%)
 Frame = -1

Query: 409 VFFRWCKHCWVSLYGT 362
           + ++   HCW ++Y T
Sbjct: 251 ILYKSTLHCWATIYKT 266


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,708
Number of Sequences: 438
Number of extensions: 2923
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16870914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)