Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_B08
         (496 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z98866-1|CAB11558.1|  416|Caenorhabditis elegans Hypothetical pr...   174   3e-44
AF099922-3|AAK21407.2|  411|Caenorhabditis elegans Hypothetical ...   150   5e-37
AF099922-2|AAM48537.1|  432|Caenorhabditis elegans Hypothetical ...   150   5e-37
Z78012-4|CAB01414.1|  435|Caenorhabditis elegans Hypothetical pr...    48   5e-06
AF016440-3|AAB65906.1|  443|Caenorhabditis elegans Proteasome re...    40   0.001
Z81077-9|CAD56582.1|  565|Caenorhabditis elegans Hypothetical pr...    29   1.4  
Z81077-8|CAB03072.2|  528|Caenorhabditis elegans Hypothetical pr...    29   1.4  
Z68161-9|CAA92298.2|  688|Caenorhabditis elegans Hypothetical pr...    28   4.3  
U00063-2|AAK18961.1|  329|Caenorhabditis elegans Hypothetical pr...    27   7.5  

>Z98866-1|CAB11558.1|  416|Caenorhabditis elegans Hypothetical
           protein Y49E10.1 protein.
          Length = 416

 Score =  174 bits (423), Expect = 3e-44
 Identities = 86/136 (63%), Positives = 104/136 (76%)
 Frame = +1

Query: 88  TVTKMEVDSTKGEGFRPYYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLRXXXXX 267
           T  K+  +S + +  R Y+ TK+++ Q  VA+KSQN+RRLQAQRNELN KVRML+     
Sbjct: 17  TAQKLTEESDE-KTLRKYFSTKVDDAQQKVADKSQNVRRLQAQRNELNTKVRMLKEELQQ 75

Query: 268 XXXXGSYVGEVVKPMDKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHK 447
               GSYVGEV K MDKKKVLVKVHPEGK+VVD+DK++DIN +    RVALR +SY LHK
Sbjct: 76  LHEQGSYVGEVSKAMDKKKVLVKVHPEGKYVVDVDKSIDINSLNTGARVALRADSYALHK 135

Query: 448 ILPNKVDPLVSLMMVE 495
           +LPNKVDPLVSLMMVE
Sbjct: 136 LLPNKVDPLVSLMMVE 151


>AF099922-3|AAK21407.2|  411|Caenorhabditis elegans Hypothetical
           protein F56F11.4a protein.
          Length = 411

 Score =  150 bits (364), Expect = 5e-37
 Identities = 71/121 (58%), Positives = 93/121 (76%)
 Frame = +1

Query: 133 RPYYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPM 312
           RPY+ TK+E+ +  VAEKS N+RRL AQ+ ELN KVR+L+         GS+VGEV K M
Sbjct: 26  RPYFKTKVEQAEQTVAEKSINVRRLMAQQKELNGKVRLLKEEISHLHEQGSHVGEVCKAM 85

Query: 313 DKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMV 492
           DKKKVLVK HP+GK++VD+  +VDI+ + A  RVALR ++Y +H++LP+KVDPLVSLMMV
Sbjct: 86  DKKKVLVKNHPDGKYIVDVAASVDISTLAAGTRVALRADNYAIHEVLPSKVDPLVSLMMV 145

Query: 493 E 495
           E
Sbjct: 146 E 146


>AF099922-2|AAM48537.1|  432|Caenorhabditis elegans Hypothetical
           protein F56F11.4b protein.
          Length = 432

 Score =  150 bits (364), Expect = 5e-37
 Identities = 71/121 (58%), Positives = 93/121 (76%)
 Frame = +1

Query: 133 RPYYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPM 312
           RPY+ TK+E+ +  VAEKS N+RRL AQ+ ELN KVR+L+         GS+VGEV K M
Sbjct: 47  RPYFKTKVEQAEQTVAEKSINVRRLMAQQKELNGKVRLLKEEISHLHEQGSHVGEVCKAM 106

Query: 313 DKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMV 492
           DKKKVLVK HP+GK++VD+  +VDI+ + A  RVALR ++Y +H++LP+KVDPLVSLMMV
Sbjct: 107 DKKKVLVKNHPDGKYIVDVAASVDISTLAAGTRVALRADNYAIHEVLPSKVDPLVSLMMV 166

Query: 493 E 495
           E
Sbjct: 167 E 167


>Z78012-4|CAB01414.1|  435|Caenorhabditis elegans Hypothetical
           protein C52E4.4 protein.
          Length = 435

 Score = 47.6 bits (108), Expect = 5e-06
 Identities = 23/58 (39%), Positives = 32/58 (55%)
 Frame = +1

Query: 322 KVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVE 495
           + L+ V    KFVVDL  +V   D+    RV +    Y +H  LP K+DP V++M VE
Sbjct: 112 RYLINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHLPLPAKIDPTVTMMQVE 169


>AF016440-3|AAB65906.1|  443|Caenorhabditis elegans Proteasome
           regulatory particle,atpase-like protein 2 protein.
          Length = 443

 Score = 39.5 bits (88), Expect = 0.001
 Identities = 31/118 (26%), Positives = 57/118 (48%), Gaps = 3/118 (2%)
 Frame = +1

Query: 151 KIEELQLIVAEKSQNLRRLQAQ---RNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKK 321
           +I++  L+  E  QN  RL+ Q   + E  AKV  LR            VG + + +D +
Sbjct: 70  RIKDYLLMEQEFIQNQERLKPQEERQEEERAKVDELRGTPMA-------VGSLEEIIDDQ 122

Query: 322 KVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVE 495
             +V  +   +  V++   VD   +   C V L ++++ +  +L +  DP+VS+M +E
Sbjct: 123 HAIVSTNVGSEHYVNIMSFVDKEQLEPGCSVLLNHKNHAVIGVLSDDTDPMVSVMKLE 180


>Z81077-9|CAD56582.1|  565|Caenorhabditis elegans Hypothetical
           protein F36A2.9b protein.
          Length = 565

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = +1

Query: 292 GEVVKPMDKKKVLVKVHPEGKFVVDLDKN 378
           G VV  +D+K +  + H EGKF+VD + N
Sbjct: 16  GSVVPNVDQKILRGEFHDEGKFMVDYEDN 44


>Z81077-8|CAB03072.2|  528|Caenorhabditis elegans Hypothetical
           protein F36A2.9a protein.
          Length = 528

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = +1

Query: 292 GEVVKPMDKKKVLVKVHPEGKFVVDLDKN 378
           G VV  +D+K +  + H EGKF+VD + N
Sbjct: 16  GSVVPNVDQKILRGEFHDEGKFMVDYEDN 44


>Z68161-9|CAA92298.2|  688|Caenorhabditis elegans Hypothetical
           protein F20C5.5 protein.
          Length = 688

 Score = 27.9 bits (59), Expect = 4.3
 Identities = 15/49 (30%), Positives = 26/49 (53%)
 Frame = +1

Query: 82  NMTVTKMEVDSTKGEGFRPYYITKIEELQLIVAEKSQNLRRLQAQRNEL 228
           N  ++  E  ST  E    Y    +E+ Q  +AEK QN+++L+ +  +L
Sbjct: 78  NTEISTQESTSTSTE----YQFATLEDFQNAMAEKDQNIKKLKEEVEKL 122


>U00063-2|AAK18961.1|  329|Caenorhabditis elegans Hypothetical
           protein F56C9.6 protein.
          Length = 329

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = -1

Query: 379 RFCPDLRQIYLRGALLPAPSFCP*V*QLHPHMNP 278
           +  PD R  Y+  A +PAPS  P V   HP + P
Sbjct: 230 KITPDFRFNYIPNAAVPAPSVVP-VIATHPGVAP 262


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,762,242
Number of Sequences: 27780
Number of extensions: 209321
Number of successful extensions: 574
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 574
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 935344784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)