Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0006_B05
(553 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0824 - 32243495-32244319,32244449-32244859 56 2e-08
11_01_0750 - 6315126-6315896,6316371-6316784 46 3e-05
01_01_1152 + 9170628-9171899 44 6e-05
11_02_0012 - 7346282-7347136,7347234-7347593 36 0.021
11_02_0011 - 7337618-7338496,7338596-7338991 35 0.050
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 33 0.11
11_02_0014 - 7352619-7352918,7353173-7353418 33 0.15
11_01_0771 + 6453130-6454488 33 0.15
11_01_0767 + 6438648-6438809,6439146-6440000 33 0.20
03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869 32 0.26
03_05_0294 + 22855503-22855946,22856346-22856399 32 0.26
02_05_0043 - 25366965-25368211,25368555-25369070,25369185-25370091 29 3.3
09_02_0338 + 7426999-7428322,7428390-7428646 28 5.7
10_01_0007 - 79867-79950,80258-80303,80409-80641,80765-80836,811... 27 7.5
12_01_1080 + 11241590-11241625,11241723-11242018,11242113-112422... 27 10.0
10_08_0960 - 21853010-21853282,21854078-21854449,21854555-218548... 27 10.0
>01_06_0824 - 32243495-32244319,32244449-32244859
Length = 411
Score = 55.6 bits (128), Expect = 2e-08
Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 10/154 (6%)
Frame = +3
Query: 117 DKNVVSSPLGVMMLMLLYKAGAGEGSRAEIDKFLG--NGDYSGVANPYISLSKTFSEMNP 290
DKN+ SPL + + L AGA + +I FLG G +++L + P
Sbjct: 31 DKNLAVSPLSLHAALALLGAGARGETLDQIIAFLGPAGGPAHAALASHVALCSLADDSGP 90
Query: 291 D------YFTMANKIYVGNKYTLDEKFT-ITVRQYQSEVETIDFSDT-KKAADIINQWAN 446
AN ++V L + + +Y++E + F D ++A IN+W
Sbjct: 91 GDDRGGPKVRFANGVWVDAALRLKAAYARVVADKYRAEARPVSFRDKLEEARREINEWFE 150
Query: 447 EKTRGHIRSPISDDTIDPNAAAALFNVIFFQGHW 548
T G I+ + D +D A L N ++F+G W
Sbjct: 151 SATAGRIKDFLPKDAVDRATPAVLGNALYFKGDW 184
>11_01_0750 - 6315126-6315896,6316371-6316784
Length = 394
Score = 45.6 bits (103), Expect = 3e-05
Identities = 39/163 (23%), Positives = 65/163 (39%), Gaps = 11/163 (6%)
Frame = +3
Query: 93 GNVYIXXKDKNVVSSPLGVMMLMLLYKAGAGEGSRAEIDKFLG--NGDYSGVANPYISLS 266
G V N S V + + L GA +R ++ + LG G G A+ S
Sbjct: 23 GRVLAAAGTGNAAVSAPAVHVSLALAAGGARGATRRQVLQALGCGGGGRGGAADAANVAS 82
Query: 267 KTFSEMNPDYFT-------MANKIYVGNKYTLDEKFT-ITVRQYQSEVETIDFSDTKK-A 419
+ + D T A ++ +L +F + Y S + DF + + A
Sbjct: 83 RVVKRVLRDRSTSGGPRLAFAGGVWADASRSLSPEFVGLAGNVYGSAAKKADFKNKPEDA 142
Query: 420 ADIINQWANEKTRGHIRSPISDDTIDPNAAAALFNVIFFQGHW 548
D IN W + T+G + + + TID N L + ++F+G W
Sbjct: 143 PDQINSWVKDSTKGTVTTLLPAGTIDQNTGLVLGSALYFRGRW 185
>01_01_1152 + 9170628-9171899
Length = 423
Score = 44.4 bits (100), Expect = 6e-05
Identities = 34/146 (23%), Positives = 65/146 (44%), Gaps = 3/146 (2%)
Frame = +3
Query: 120 KNVVSSPLGVMMLMLLYKAGAGEGSRAEIDKFLGNGDYSGV-ANPYISLSKTFSEMNPDY 296
+N + SPL + L GA ++ E+ FLG+ + + +P L +
Sbjct: 59 RNFIVSPLSFHAALALVADGARGETQRELLGFLGSPSLAELHRSPTTRLVARLRHLPNTS 118
Query: 297 FTMANKIYVGNKYTLDEKFT-ITVRQYQSEVETIDF-SDTKKAADIINQWANEKTRGHIR 470
F A ++V L +F +Y + E DF + ++A + +N + ++ T G IR
Sbjct: 119 F--ACGVWVDRGRALTPEFADAAASRYAAVAEPADFATQPEQARERVNAFVSDATEGLIR 176
Query: 471 SPISDDTIDPNAAAALFNVIFFQGHW 548
+ +++D + L N + F+G W
Sbjct: 177 DVLPPNSVDSSTVVVLANAVHFKGTW 202
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 35.9 bits (79), Expect = 0.021
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +3
Query: 411 KKAADIINQWANEKTRGHIRSPISDDTIDPNAAAALFNVIFFQGHW 548
K + IN+W ++ T IR + D ++ A L N I+F+G W
Sbjct: 122 KSSRKKINKWVSKATNKLIREILPDGSVHGGTALVLVNAIYFKGKW 167
>11_02_0011 - 7337618-7338496,7338596-7338991
Length = 424
Score = 34.7 bits (76), Expect = 0.050
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +3
Query: 372 YQSEVETIDFS-DTKKAADIINQWANEKTRGHIRSPISDDTIDPNAAAALFNVIFFQGHW 548
Y++ +F K++ IN+W ++ T I + D ++ + A L N I+F+G W
Sbjct: 120 YKAVTRAANFQRQPKRSRKKINKWVSKATNKLIPEILPDGSVHVDTALVLVNAIYFKGKW 179
>03_05_0293 +
22849103-22849513,22849670-22849756,22850156-22850284,
22850507-22851262,22853474-22854250
Length = 719
Score = 33.5 bits (73), Expect = 0.11
Identities = 27/100 (27%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Frame = +3
Query: 120 KNVVSSPLGVMMLMLLYKAGAGEGSRAEIDKFLGN-GDYSGV---ANPYISL-SKTFSEM 284
+NV SPL + + + L AGAG +R ++ LG G G+ A + L S
Sbjct: 35 RNVAFSPLSLHVALSLVAAGAGGATRDQLASALGGPGSAEGLHAFAEQLVQLVLADASGA 94
Query: 285 NPDYFTMANKIYVGNKYTLDEKF-TITVRQYQSEVETIDF 401
A+ ++V +L + F + V +Y++E ++DF
Sbjct: 95 GGPRVAFADGVFVDASLSLKKTFGDVAVGKYKAETHSVDF 134
Score = 33.1 bits (72), Expect = 0.15
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +3
Query: 387 ETIDFSDTKKAADI---INQWANEKTRGHIRSPISDDTIDPNAAAALFNVIFFQGHW 548
E I + KAA++ +N W + T G I+ + ++D L N ++F+G W
Sbjct: 200 EPITHWTSGKAAEVASQVNSWVEKVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAW 256
Score = 32.7 bits (71), Expect = 0.20
Identities = 15/76 (19%), Positives = 32/76 (42%)
Frame = +3
Query: 321 VGNKYTLDEKFTITVRQYQSEVETIDFSDTKKAADIINQWANEKTRGHIRSPISDDTIDP 500
+ + D F +++ + V + +N W + T G I++ + +I+
Sbjct: 433 IAEDFVADHPFLFLIQEDMTGVVLFVGHVAAEVLGQVNSWVDRVTSGLIKNIATPRSINH 492
Query: 501 NAAAALFNVIFFQGHW 548
N L N ++F+G W
Sbjct: 493 NTKLVLANALYFKGAW 508
>11_02_0014 - 7352619-7352918,7353173-7353418
Length = 181
Score = 33.1 bits (72), Expect = 0.15
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +3
Query: 405 DTKKAADIINQWANEKTRGHIRSPISDDTIDPNAAAALFNVIFFQGHW 548
+ KK+ IN+W ++ T I + D ++ L N I+F+G W
Sbjct: 82 EPKKSRKKINEWVSKATNKLIPEILPDGSVHRLTTLVLVNAIYFKGKW 129
>11_01_0771 + 6453130-6454488
Length = 452
Score = 33.1 bits (72), Expect = 0.15
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +3
Query: 411 KKAADIINQWANEKTRGHIRSPISDDTIDPNAAAALFNVIFFQGHW 548
++A IN WA T I + ++ P A L N I+F+G W
Sbjct: 171 EEARKQINAWARRATGKLITDVLPPRSVGPETAVVLGNAIYFKGKW 216
>11_01_0767 + 6438648-6438809,6439146-6440000
Length = 338
Score = 32.7 bits (71), Expect = 0.20
Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = +3
Query: 363 VRQYQSEVETIDFSDTK-KAADIINQWANEKTRGHIRSPISDDTIDPNAAAALFNVIFFQ 539
V Y+ T+DF + +A IN W T+ I I ++ + + N I+F+
Sbjct: 39 VGTYKGAASTVDFKNHPVEARKEINAWVARATKNLITEVIKPESQSVDTRHVVGNAIYFK 98
Query: 540 GHW 548
G W
Sbjct: 99 GEW 101
>03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869
Length = 258
Score = 32.3 bits (70), Expect = 0.26
Identities = 12/45 (26%), Positives = 22/45 (48%)
Frame = +3
Query: 414 KAADIINQWANEKTRGHIRSPISDDTIDPNAAAALFNVIFFQGHW 548
+ A +N W + T G I+ + ++D L N ++F+G W
Sbjct: 4 EVASQVNSWVDRVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAW 48
>03_05_0294 + 22855503-22855946,22856346-22856399
Length = 165
Score = 32.3 bits (70), Expect = 0.26
Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 8/109 (7%)
Frame = +3
Query: 123 NVVSSPLGVMMLMLLYKAGAGEGSRAEIDKFL---GNGDYSGV---ANPYISL-SKTFSE 281
NV SPL + + + L AGAG +R ++ L G G G+ A + L S
Sbjct: 45 NVAFSPLSLHVALSLVAAGAGGATRDQLVSLLGVPGRGTAEGLHAFAEQVVQLVLADSSP 104
Query: 282 MNPDYFTMANKIYVGNKYTLDEKF-TITVRQYQSEVETIDFSDTKKAAD 425
A+ +++ + +L + F + V +Y++E ++DF TK D
Sbjct: 105 AGGPRVAFADGVFIDSSLSLMKSFKDVAVGKYKAETHSVDF-QTKVLRD 152
>02_05_0043 - 25366965-25368211,25368555-25369070,25369185-25370091
Length = 889
Score = 28.7 bits (61), Expect = 3.3
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -2
Query: 270 FYLS*CTDWQPRYNLHCLKTC 208
+ L CTD+ P+Y HC +C
Sbjct: 296 YLLDGCTDYNPKYKEHCSTSC 316
>09_02_0338 + 7426999-7428322,7428390-7428646
Length = 526
Score = 27.9 bits (59), Expect = 5.7
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -2
Query: 198 HDYLHRRQLCTEALASSRLMVKTQHSC 118
H+YLH+ + E + +SRLMV+ +C
Sbjct: 379 HNYLHKERNDLERIYNSRLMVQHTRNC 405
>10_01_0007 -
79867-79950,80258-80303,80409-80641,80765-80836,
81135-81230,81506-81607,81684-82349
Length = 432
Score = 27.5 bits (58), Expect = 7.5
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +3
Query: 192 SRAEIDKFLGNGDYSGVANPYISLSKTFSEMNPDYFTMANKIYV-GNKYT 338
S A+ D GD V + + L+ F E++PD+ ++N +Y+ G+ Y+
Sbjct: 152 SYADTDAGFRTGDTIAVHHILVFLNNWFQEVHPDF--LSNPLYIAGDSYS 199
>12_01_1080 + 11241590-11241625,11241723-11242018,11242113-11242269,
11242381-11242449,11242551-11243480,11243868-11243906,
11244414-11244478,11244663-11244768,11244850-11245050,
11247001-11247201,11247756-11247779,11249425-11249586,
11249676-11249915,11250267-11250479,11250618-11250968,
11251041-11251193,11251649-11251858,11252049-11252267,
11252365-11252482,11252879-11253828,11254023-11254220,
11254294-11254553,11255316-11255505,11255817-11256169,
11258278-11258386,11258466-11258615,11258748-11258844,
11259315-11259415
Length = 2065
Score = 27.1 bits (57), Expect = 10.0
Identities = 30/136 (22%), Positives = 54/136 (39%), Gaps = 1/136 (0%)
Frame = +3
Query: 141 LGVMMLMLLYKAGAGEGSRAEIDKFLGNGDYSGVANPYISLSKTFSEMNPDYFTMANKIY 320
L +M+ L Y AG G + +G+ SG ++ + + + TM N
Sbjct: 643 LELMLTKLRYAAGEGNSESS-------SGEISGSSSGKMDATHGLQIIGMSA-TMPNVAA 694
Query: 321 VGNKYTLDEKFTITVRQYQSEVETIDFSDTKKAADIINQWANEKTRGHIRSPISD-DTID 497
V + DE+FT YQ+E + + K + + + + + ++D D
Sbjct: 695 VADWLQKDEEFTAQAALYQTEFRPVPLEEFIKVGNQV--FDKDMNVVRVLPKVADLGGKD 752
Query: 498 PNAAAALFNVIFFQGH 545
P+ L N + QGH
Sbjct: 753 PDHIVELCNEVVQQGH 768
>10_08_0960 -
21853010-21853282,21854078-21854449,21854555-21854862,
21854946-21855102
Length = 369
Score = 27.1 bits (57), Expect = 10.0
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +3
Query: 441 ANEKTRGHIRSPISDDTIDPNAAAA 515
A + RG +SP DD I+PNAAAA
Sbjct: 241 AAAQARGS-KSPEDDDNINPNAAAA 264
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,862,790
Number of Sequences: 37544
Number of extensions: 302331
Number of successful extensions: 863
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 835
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 862
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1245816180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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