Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0006_B05
(553 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or cys... 73 1e-13
AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin prote... 73 1e-13
AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or cys... 69 2e-12
AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin prote... 69 2e-12
U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein... 64 6e-11
AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or cys... 64 6e-11
U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein ... 54 9e-08
U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein ... 54 9e-08
U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein ... 54 9e-08
AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or cys... 54 9e-08
AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or cys... 54 9e-08
AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or cys... 54 9e-08
U70851-2|AAM97996.1| 671|Caenorhabditis elegans Osmotic avoidan... 27 6.8
U70851-1|AAM97997.1| 699|Caenorhabditis elegans Osmotic avoidan... 27 6.8
D38632-1|BAA07612.1| 672|Caenorhabditis elegans OSM-3 (kinesin ... 27 6.8
AF149285-1|AAF99084.1| 672|Caenorhabditis elegans Osm-3 protein. 27 6.8
Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical pr... 27 9.0
AJ505020-1|CAD43602.1| 382|Caenorhabditis elegans alpha-1->3-fu... 27 9.0
AC006674-5|AAF39933.2| 382|Caenorhabditis elegans Fucosyl trans... 27 9.0
>AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 72.9 bits (171), Expect = 1e-13
Identities = 46/143 (32%), Positives = 77/143 (53%), Gaps = 3/143 (2%)
Frame = +3
Query: 129 VSSPLGVMMLMLLYKAGAGEGSRAEIDKFLGNGDYSGVANPYIS-LSKTFSEMNPDYFTM 305
V SP+ +++ + L GA +R +I + NG + S ++K + D T+
Sbjct: 32 VFSPVSILLSLALVHLGAKGHTRHDIRNSVVNGSTDEQFIEHFSFINKLLNSSVNDVETL 91
Query: 306 -ANKIYVGNKYTLDEKFTITVRQ-YQSEVETIDFSDTKKAADIINQWANEKTRGHIRSPI 479
AN+++V + + + FT +R+ Y +E TIDF +++AA I+NQ+ +E T+G I I
Sbjct: 92 IANRLFVSPEQAIRKAFTDELREHYNAETATIDFKKSQEAAKIMNQFISESTKGKIPDMI 151
Query: 480 SDDTIDPNAAAALFNVIFFQGHW 548
D + + A L N IFFQG W
Sbjct: 152 KPDNL-KDVDAILINAIFFQGDW 173
>AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin protein
1 protein.
Length = 366
Score = 72.9 bits (171), Expect = 1e-13
Identities = 46/143 (32%), Positives = 77/143 (53%), Gaps = 3/143 (2%)
Frame = +3
Query: 129 VSSPLGVMMLMLLYKAGAGEGSRAEIDKFLGNGDYSGVANPYIS-LSKTFSEMNPDYFTM 305
V SP+ +++ + L GA +R +I + NG + S ++K + D T+
Sbjct: 32 VFSPVSILLSLALVHLGAKGHTRHDIRNSVVNGSTDEQFIEHFSFINKLLNSSVNDVETL 91
Query: 306 -ANKIYVGNKYTLDEKFTITVRQ-YQSEVETIDFSDTKKAADIINQWANEKTRGHIRSPI 479
AN+++V + + + FT +R+ Y +E TIDF +++AA I+NQ+ +E T+G I I
Sbjct: 92 IANRLFVSPEQAIRKAFTDELREHYNAETATIDFKKSQEAAKIMNQFISESTKGKIPDMI 151
Query: 480 SDDTIDPNAAAALFNVIFFQGHW 548
D + + A L N IFFQG W
Sbjct: 152 KPDNL-KDVDAILINAIFFQGDW 173
>AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 359
Score = 68.9 bits (161), Expect = 2e-12
Identities = 42/144 (29%), Positives = 77/144 (53%), Gaps = 2/144 (1%)
Frame = +3
Query: 123 NVVSSPLGVMMLMLLYKAGAGEGSRAEIDKFLGNGDYSGVANPYISLSKTFSEMNPDYFT 302
+VV SPL + + + L AGA ++ E++ LG S + + L + + + T
Sbjct: 24 SVVLSPLSISLGLALIHAGACGSTQKELEDVLGG---SRIFEEFSGLMEAVGDTDNGVET 80
Query: 303 -MANKIYVGNKYTLDEKFTITVRQ-YQSEVETIDFSDTKKAADIINQWANEKTRGHIRSP 476
+ N+++V YT+ + + TV + Y++ E++DFS T++AA +N + T G I+
Sbjct: 81 KIVNRVFVNQAYTIHQDYLETVEKLYKASGESLDFSQTEQAAKTMNTFVENHTNGKIKDL 140
Query: 477 ISDDTIDPNAAAALFNVIFFQGHW 548
I D+ + NA A L N ++F+ W
Sbjct: 141 IPADSAN-NAFAFLVNAMYFKADW 163
>AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin protein
2 protein.
Length = 359
Score = 68.9 bits (161), Expect = 2e-12
Identities = 42/144 (29%), Positives = 77/144 (53%), Gaps = 2/144 (1%)
Frame = +3
Query: 123 NVVSSPLGVMMLMLLYKAGAGEGSRAEIDKFLGNGDYSGVANPYISLSKTFSEMNPDYFT 302
+VV SPL + + + L AGA ++ E++ LG S + + L + + + T
Sbjct: 24 SVVLSPLSISLGLALIHAGACGSTQKELEDVLGG---SRIFEEFSGLMEAVGDTDNGVET 80
Query: 303 -MANKIYVGNKYTLDEKFTITVRQ-YQSEVETIDFSDTKKAADIINQWANEKTRGHIRSP 476
+ N+++V YT+ + + TV + Y++ E++DFS T++AA +N + T G I+
Sbjct: 81 KIVNRVFVNQAYTIHQDYLETVEKLYKASGESLDFSQTEQAAKTMNTFVENHTNGKIKDL 140
Query: 477 ISDDTIDPNAAAALFNVIFFQGHW 548
I D+ + NA A L N ++F+ W
Sbjct: 141 IPADSAN-NAFAFLVNAMYFKADW 163
>U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein 6
protein.
Length = 375
Score = 64.1 bits (149), Expect = 6e-11
Identities = 43/148 (29%), Positives = 76/148 (51%), Gaps = 5/148 (3%)
Frame = +3
Query: 120 KNVVSSPLGVMM-LMLLYKAGAGEGSRAEIDKFLGNGDYSGVANPY---ISLSKTFSEMN 287
++ V SPL + + L L++ A GE +R EI K L NG + IS +E
Sbjct: 32 ESFVFSPLSIALALSLVHVAAKGE-TRDEIRKALLNGATDEELEQHFSNISAGLLVAEKG 90
Query: 288 PDYFTMANKIYVGNKYTLDEKFTITVRQ-YQSEVETIDFSDTKKAADIINQWANEKTRGH 464
+ +AN I+ +T+ + + V++ Y + ++F D + +A+ IN + +E T+GH
Sbjct: 91 TEV-NVANHIFSRKTFTIKKLYLNDVKKLYNAGASQLNFEDQEASAEAINNFVSENTKGH 149
Query: 465 IRSPISDDTIDPNAAAALFNVIFFQGHW 548
I+ I+ D+I A L N +F+ +W
Sbjct: 150 IKKIINPDSISEELVAVLTNAFYFKANW 177
>AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 375
Score = 64.1 bits (149), Expect = 6e-11
Identities = 43/148 (29%), Positives = 76/148 (51%), Gaps = 5/148 (3%)
Frame = +3
Query: 120 KNVVSSPLGVMM-LMLLYKAGAGEGSRAEIDKFLGNGDYSGVANPY---ISLSKTFSEMN 287
++ V SPL + + L L++ A GE +R EI K L NG + IS +E
Sbjct: 32 ESFVFSPLSIALALSLVHVAAKGE-TRDEIRKALLNGATDEELEQHFSNISAGLLVAEKG 90
Query: 288 PDYFTMANKIYVGNKYTLDEKFTITVRQ-YQSEVETIDFSDTKKAADIINQWANEKTRGH 464
+ +AN I+ +T+ + + V++ Y + ++F D + +A+ IN + +E T+GH
Sbjct: 91 TEV-NVANHIFSRKTFTIKKLYLNDVKKLYNAGASQLNFEDQEASAEAINNFVSENTKGH 149
Query: 465 IRSPISDDTIDPNAAAALFNVIFFQGHW 548
I+ I+ D+I A L N +F+ +W
Sbjct: 150 IKKIINPDSISEELVAVLTNAFYFKANW 177
>U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform a protein.
Length = 366
Score = 53.6 bits (123), Expect = 9e-08
Identities = 36/148 (24%), Positives = 73/148 (49%), Gaps = 5/148 (3%)
Frame = +3
Query: 120 KNVVSSPLGVMM-LMLLYKAGAGEGSRAEIDKFLGNGDYSGVANPY---ISLSKTFSEMN 287
+++ SPL + + L L++ A GE +R +I + L G + IS + +E
Sbjct: 23 ESLAFSPLSIALALSLVHVAAKGE-TRDQIREALVKGSTDEQLEQHFANISAALLAAERG 81
Query: 288 PDYFTMANKIYVGNKYTLDEKFTITVRQ-YQSEVETIDFSDTKKAADIINQWANEKTRGH 464
+ +AN ++ + + + + V++ Y + ++DF + + A+ IN + E T H
Sbjct: 82 TEV-KLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDH 140
Query: 465 IRSPISDDTIDPNAAAALFNVIFFQGHW 548
I+ I D+I+ + A L N ++F+ W
Sbjct: 141 IKKIIGSDSINSDLVAVLTNALYFKADW 168
>U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform b protein.
Length = 366
Score = 53.6 bits (123), Expect = 9e-08
Identities = 36/148 (24%), Positives = 73/148 (49%), Gaps = 5/148 (3%)
Frame = +3
Query: 120 KNVVSSPLGVMM-LMLLYKAGAGEGSRAEIDKFLGNGDYSGVANPY---ISLSKTFSEMN 287
+++ SPL + + L L++ A GE +R +I + L G + IS + +E
Sbjct: 23 ESLAFSPLSIALALSLVHVAAKGE-TRDQIREALVKGSTDEQLEQHFANISAALLAAERG 81
Query: 288 PDYFTMANKIYVGNKYTLDEKFTITVRQ-YQSEVETIDFSDTKKAADIINQWANEKTRGH 464
+ +AN ++ + + + + V++ Y + ++DF + + A+ IN + E T H
Sbjct: 82 TEV-KLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDH 140
Query: 465 IRSPISDDTIDPNAAAALFNVIFFQGHW 548
I+ I D+I+ + A L N ++F+ W
Sbjct: 141 IKKIIGSDSINSDLVAVLTNALYFKADW 168
>U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein 7,
isoform c protein.
Length = 365
Score = 53.6 bits (123), Expect = 9e-08
Identities = 36/148 (24%), Positives = 73/148 (49%), Gaps = 5/148 (3%)
Frame = +3
Query: 120 KNVVSSPLGVMM-LMLLYKAGAGEGSRAEIDKFLGNGDYSGVANPY---ISLSKTFSEMN 287
+++ SPL + + L L++ A GE +R +I + L G + IS + +E
Sbjct: 23 ESLAFSPLSIALALSLVHVAAKGE-TRDQIREALVKGSTDEQLEQHFANISAALLAAERG 81
Query: 288 PDYFTMANKIYVGNKYTLDEKFTITVRQ-YQSEVETIDFSDTKKAADIINQWANEKTRGH 464
+ +AN ++ + + + + V++ Y + ++DF + + A+ IN + E T H
Sbjct: 82 TEV-KLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDH 140
Query: 465 IRSPISDDTIDPNAAAALFNVIFFQGHW 548
I+ I D+I+ + A L N ++F+ W
Sbjct: 141 IKKIIGSDSINSDLVAVLTNALYFKADW 168
>AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 365
Score = 53.6 bits (123), Expect = 9e-08
Identities = 36/148 (24%), Positives = 73/148 (49%), Gaps = 5/148 (3%)
Frame = +3
Query: 120 KNVVSSPLGVMM-LMLLYKAGAGEGSRAEIDKFLGNGDYSGVANPY---ISLSKTFSEMN 287
+++ SPL + + L L++ A GE +R +I + L G + IS + +E
Sbjct: 23 ESLAFSPLSIALALSLVHVAAKGE-TRDQIREALVKGSTDEQLEQHFANISAALLAAERG 81
Query: 288 PDYFTMANKIYVGNKYTLDEKFTITVRQ-YQSEVETIDFSDTKKAADIINQWANEKTRGH 464
+ +AN ++ + + + + V++ Y + ++DF + + A+ IN + E T H
Sbjct: 82 TEV-KLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDH 140
Query: 465 IRSPISDDTIDPNAAAALFNVIFFQGHW 548
I+ I D+I+ + A L N ++F+ W
Sbjct: 141 IKKIIGSDSINSDLVAVLTNALYFKADW 168
>AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 53.6 bits (123), Expect = 9e-08
Identities = 36/148 (24%), Positives = 73/148 (49%), Gaps = 5/148 (3%)
Frame = +3
Query: 120 KNVVSSPLGVMM-LMLLYKAGAGEGSRAEIDKFLGNGDYSGVANPY---ISLSKTFSEMN 287
+++ SPL + + L L++ A GE +R +I + L G + IS + +E
Sbjct: 23 ESLAFSPLSIALALSLVHVAAKGE-TRDQIREALVKGSTDEQLEQHFANISAALLAAERG 81
Query: 288 PDYFTMANKIYVGNKYTLDEKFTITVRQ-YQSEVETIDFSDTKKAADIINQWANEKTRGH 464
+ +AN ++ + + + + V++ Y + ++DF + + A+ IN + E T H
Sbjct: 82 TEV-KLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDH 140
Query: 465 IRSPISDDTIDPNAAAALFNVIFFQGHW 548
I+ I D+I+ + A L N ++F+ W
Sbjct: 141 IKKIIGSDSINSDLVAVLTNALYFKADW 168
>AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 53.6 bits (123), Expect = 9e-08
Identities = 36/148 (24%), Positives = 73/148 (49%), Gaps = 5/148 (3%)
Frame = +3
Query: 120 KNVVSSPLGVMM-LMLLYKAGAGEGSRAEIDKFLGNGDYSGVANPY---ISLSKTFSEMN 287
+++ SPL + + L L++ A GE +R +I + L G + IS + +E
Sbjct: 23 ESLAFSPLSIALALSLVHVAAKGE-TRDQIREALVKGSTDEQLEQHFANISAALLAAERG 81
Query: 288 PDYFTMANKIYVGNKYTLDEKFTITVRQ-YQSEVETIDFSDTKKAADIINQWANEKTRGH 464
+ +AN ++ + + + + V++ Y + ++DF + + A+ IN + E T H
Sbjct: 82 TEV-KLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDH 140
Query: 465 IRSPISDDTIDPNAAAALFNVIFFQGHW 548
I+ I D+I+ + A L N ++F+ W
Sbjct: 141 IKKIIGSDSINSDLVAVLTNALYFKADW 168
>U70851-2|AAM97996.1| 671|Caenorhabditis elegans Osmotic avoidance
abnormal protein3, isoform a protein.
Length = 671
Score = 27.5 bits (58), Expect = 6.8
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 261 LSKTFSE-MNPDYFTMANKIYVGNKYTLDEKFTITVRQYQSEVETID 398
L+K+ SE + YF +I V NKY D+K + + + S+ T D
Sbjct: 594 LAKSDSENLANSYFKPVKQINVINKYKSDQKLSTSKSLFPSKTPTFD 640
>U70851-1|AAM97997.1| 699|Caenorhabditis elegans Osmotic avoidance
abnormal protein3, isoform b protein.
Length = 699
Score = 27.5 bits (58), Expect = 6.8
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 261 LSKTFSE-MNPDYFTMANKIYVGNKYTLDEKFTITVRQYQSEVETID 398
L+K+ SE + YF +I V NKY D+K + + + S+ T D
Sbjct: 622 LAKSDSENLANSYFKPVKQINVINKYKSDQKLSTSKSLFPSKTPTFD 668
>D38632-1|BAA07612.1| 672|Caenorhabditis elegans OSM-3 (kinesin
protein) protein.
Length = 672
Score = 27.5 bits (58), Expect = 6.8
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 261 LSKTFSE-MNPDYFTMANKIYVGNKYTLDEKFTITVRQYQSEVETID 398
L+K+ SE + YF +I V NKY D+K + + + S+ T D
Sbjct: 595 LAKSDSENLANSYFKPVKQINVINKYKSDQKLSTSKSLFPSKTPTFD 641
>AF149285-1|AAF99084.1| 672|Caenorhabditis elegans Osm-3 protein.
Length = 672
Score = 27.5 bits (58), Expect = 6.8
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 261 LSKTFSE-MNPDYFTMANKIYVGNKYTLDEKFTITVRQYQSEVETID 398
L+K+ SE + YF +I V NKY D+K + + + S+ T D
Sbjct: 594 LAKSDSENLANSYFKPVKQINVINKYKSDQKLSTSKSLFPSKTPTFD 640
>Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical
protein F55H12.3 protein.
Length = 2972
Score = 27.1 bits (57), Expect = 9.0
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 7/79 (8%)
Frame = +3
Query: 306 ANKIYVGNKYTL--DEKFTI--TVRQYQSEVETIDFSDTKKAADIINQ---WANEKTRGH 464
+NK V NKY L D T T+R+YQ+ + F D +Q W T G
Sbjct: 732 SNKTPVENKYELTPDNNHTSYGTMRKYQN-LTNFGFGAFCVCGDERSQPDEWICYNTEGL 790
Query: 465 IRSPISDDTIDPNAAAALF 521
+ +PI++ + P A ALF
Sbjct: 791 MTNPINNACMLPEAQDALF 809
>Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 27.1 bits (57), Expect = 9.0
Identities = 23/74 (31%), Positives = 31/74 (41%)
Frame = +3
Query: 171 KAGAGEGSRAEIDKFLGNGDYSGVANPYISLSKTFSEMNPDYFTMANKIYVGNKYTLDEK 350
K G E R++ +K + SGVA S F E N +M + KY DEK
Sbjct: 1948 KRGIAEFERSKQEKEVQR---SGVAETSHSSKHIFDESN---ISMDDVFNTSQKYKSDEK 2001
Query: 351 FTITVRQYQSEVET 392
+ R + EV T
Sbjct: 2002 LSTPERTVEPEVST 2015
>Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 27.1 bits (57), Expect = 9.0
Identities = 23/74 (31%), Positives = 31/74 (41%)
Frame = +3
Query: 171 KAGAGEGSRAEIDKFLGNGDYSGVANPYISLSKTFSEMNPDYFTMANKIYVGNKYTLDEK 350
K G E R++ +K + SGVA S F E N +M + KY DEK
Sbjct: 1948 KRGIAEFERSKQEKEVQR---SGVAETSHSSKHIFDESN---ISMDDVFNTSQKYKSDEK 2001
Query: 351 FTITVRQYQSEVET 392
+ R + EV T
Sbjct: 2002 LSTPERTVEPEVST 2015
>AJ505020-1|CAD43602.1| 382|Caenorhabditis elegans
alpha-1->3-fucosyltransferase homologueprotein.
Length = 382
Score = 27.1 bits (57), Expect = 9.0
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -1
Query: 541 PWKNITLKSAAAAFGSMVSSEIGDLICPRV 452
P KN+T+ A +G + +E+ L CP +
Sbjct: 50 PRKNVTIYVATTYYGDPIDAEMAFLTCPEL 79
>AC006674-5|AAF39933.2| 382|Caenorhabditis elegans Fucosyl
transferase protein 4 protein.
Length = 382
Score = 27.1 bits (57), Expect = 9.0
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -1
Query: 541 PWKNITLKSAAAAFGSMVSSEIGDLICPRV 452
P KN+T+ A +G + +E+ L CP +
Sbjct: 50 PRKNVTIYVATTYYGDPIDAEMAFLTCPEL 79
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,563,005
Number of Sequences: 27780
Number of extensions: 259501
Number of successful extensions: 752
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 714
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 748
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1123720628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -