Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0006_B02
(473 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 254 2e-68
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 245 1e-65
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 239 1e-63
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 239 1e-63
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 237 2e-63
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 236 5e-63
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 165 1e-41
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 165 1e-41
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 125 2e-29
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 123 8e-29
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 123 8e-29
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 122 2e-28
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 121 3e-28
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 121 3e-28
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 116 7e-27
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 116 7e-27
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 116 7e-27
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 116 1e-26
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 114 3e-26
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 114 3e-26
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 114 3e-26
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 114 3e-26
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 108 2e-24
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 107 4e-24
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 89 1e-18
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 89 1e-18
U28943-17|AAK68292.2| 811|Caenorhabditis elegans Clc-type chlo... 29 1.7
U28943-16|AAK68291.1| 1001|Caenorhabditis elegans Clc-type chlo... 29 1.7
AF319614-1|AAG49524.1| 1001|Caenorhabditis elegans CLC-type chlo... 29 1.7
AF173172-1|AAF13165.1| 811|Caenorhabditis elegans CLC chloride ... 29 1.7
U41105-5|AAA82398.1| 390|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical pr... 28 3.9
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 254 bits (622), Expect = 2e-68
Identities = 113/120 (94%), Positives = 119/120 (99%)
Frame = +2
Query: 2 QIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMD 181
QIGAKFWE+ISDEHGIDPTGAY+GDSDLQLERINVYYNEASGGKYVPRA LVDLEPGTMD
Sbjct: 15 QIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEASGGKYVPRACLVDLEPGTMD 74
Query: 182 SVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQ 361
SVR+GPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDVVRKE+ESCDCLQGFQ
Sbjct: 75 SVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAESCDCLQGFQ 134
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 245 bits (600), Expect = 1e-65
Identities = 108/120 (90%), Positives = 115/120 (95%)
Frame = +2
Query: 2 QIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMD 181
QIGAKFWE+ISDEHGI P G Y G+SDLQLERINVYYNEA+GGKYVPRA+LVDLEPGTMD
Sbjct: 15 QIGAKFWEVISDEHGIQPDGTYKGESDLQLERINVYYNEANGGKYVPRAVLVDLEPGTMD 74
Query: 182 SVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQ 361
SVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDVVRKE+E CDCLQGFQ
Sbjct: 75 SVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAEGCDCLQGFQ 134
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 239 bits (584), Expect = 1e-63
Identities = 106/120 (88%), Positives = 114/120 (95%)
Frame = +2
Query: 2 QIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMD 181
QIG+KFWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA KYVPRA+LVDLEPGTMD
Sbjct: 15 QIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYVPRAVLVDLEPGTMD 74
Query: 182 SVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQ 361
SVRSGPFGQ+FRPDN+VFGQSGAGNNWAKGHYTEGAELVD+VLDVVRKE+ES DCLQGFQ
Sbjct: 75 SVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAESTDCLQGFQ 134
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 239 bits (584), Expect = 1e-63
Identities = 106/120 (88%), Positives = 114/120 (95%)
Frame = +2
Query: 2 QIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMD 181
QIG+KFWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA KYVPRA+LVDLEPGTMD
Sbjct: 15 QIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYVPRAVLVDLEPGTMD 74
Query: 182 SVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQ 361
SVRSGPFGQ+FRPDN+VFGQSGAGNNWAKGHYTEGAELVD+VLDVVRKE+ES DCLQGFQ
Sbjct: 75 SVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAESTDCLQGFQ 134
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 237 bits (581), Expect = 2e-63
Identities = 103/120 (85%), Positives = 114/120 (95%)
Frame = +2
Query: 2 QIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMD 181
QIG+KFWE+ISDEHGI P G + G+SDLQLERI+VYYNEA+ GKYVPRA+LVDLEPGTMD
Sbjct: 15 QIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEANNGKYVPRAVLVDLEPGTMD 74
Query: 182 SVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQ 361
SVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV+RKE+E CDCLQGFQ
Sbjct: 75 SVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVIRKEAEGCDCLQGFQ 134
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 236 bits (578), Expect = 5e-63
Identities = 102/120 (85%), Positives = 114/120 (95%)
Frame = +2
Query: 2 QIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMD 181
QIG+KFWE+ISDEHGI P G + G++DLQLERI+VYYNEA+ GKYVPRA+LVDLEPGTMD
Sbjct: 15 QIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEANNGKYVPRAVLVDLEPGTMD 74
Query: 182 SVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQ 361
SVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV+RKE+E CDCLQGFQ
Sbjct: 75 SVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVIRKEAEGCDCLQGFQ 134
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 165 bits (401), Expect = 1e-41
Identities = 72/120 (60%), Positives = 94/120 (78%)
Frame = +2
Query: 2 QIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMD 181
QIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G KYVPRAILVDL+P +++
Sbjct: 15 QIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYVPRAILVDLDPESIN 74
Query: 182 SVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQ 361
VRS +G++F P+N V G+SGAGNNW++G+Y +GAE+VD VL V+R+E+E+ D L+GFQ
Sbjct: 75 YVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVIRREAEAADSLEGFQ 134
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 165 bits (401), Expect = 1e-41
Identities = 72/120 (60%), Positives = 94/120 (78%)
Frame = +2
Query: 2 QIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMD 181
QIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G KYVPRAILVDL+P +++
Sbjct: 15 QIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYVPRAILVDLDPESIN 74
Query: 182 SVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQ 361
VRS +G++F P+N V G+SGAGNNW++G+Y +GAE+VD VL V+R+E+E+ D L+GFQ
Sbjct: 75 YVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVIRREAEAADSLEGFQ 134
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 125 bits (301), Expect = 2e-29
Identities = 54/120 (45%), Positives = 81/120 (67%), Gaps = 1/120 (0%)
Frame = +2
Query: 2 QIGAKFWEIISDEHGIDPTGAY-HGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTM 178
QIG WE+ EHG+D G + + + + + +++E+ GK+VPRAI VDLEP +
Sbjct: 19 QIGNACWELYCIEHGLDEAGFLKEEEKNKKQQSLQAFFSESMNGKHVPRAIYVDLEPTVL 78
Query: 179 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGF 358
D +R+G +G +F PD + G+ A NN+A+GHYT G EL+D VLD +RK++E+C+ LQGF
Sbjct: 79 DEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDRIRKQTENCEGLQGF 138
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 123 bits (296), Expect = 8e-29
Identities = 51/119 (42%), Positives = 76/119 (63%)
Frame = +2
Query: 2 QIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMD 181
QIG WE+ EHGI P G D E ++++ G+YVPR+I VDLEP +D
Sbjct: 15 QIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYVPRSIFVDLEPTVVD 74
Query: 182 SVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGF 358
+R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +R+ +++C LQGF
Sbjct: 75 EIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADNCSGLQGF 133
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 123 bits (296), Expect = 8e-29
Identities = 51/119 (42%), Positives = 76/119 (63%)
Frame = +2
Query: 2 QIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMD 181
QIG WE+ EHGI P G D E ++++ G+YVPR+I VDLEP +D
Sbjct: 15 QIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYVPRSIFVDLEPTVVD 74
Query: 182 SVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGF 358
+R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +R+ +++C LQGF
Sbjct: 75 EIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADNCSGLQGF 133
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 122 bits (293), Expect = 2e-28
Identities = 56/121 (46%), Positives = 77/121 (63%), Gaps = 2/121 (1%)
Frame = +2
Query: 2 QIGAKFWEIISDEHGIDPTGAYHGDSDLQLE--RINVYYNEASGGKYVPRAILVDLEPGT 175
QIG WE+ EHGI P G D+ +E N +++E GK+VPRAI VDLEP
Sbjct: 15 QIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGKHVPRAIFVDLEPTV 74
Query: 176 MDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQG 355
+D VR+G + ++F P+ + G+ A NN+A+GHYT G EL+D V+D VR+ +E C LQG
Sbjct: 75 IDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMDRVRRLTERCQSLQG 134
Query: 356 F 358
F
Sbjct: 135 F 135
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 121 bits (291), Expect = 3e-28
Identities = 51/119 (42%), Positives = 77/119 (64%)
Frame = +2
Query: 2 QIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMD 181
QIG WE+ EHGI P G S + E ++++ G+YVPR+I VDLEP +D
Sbjct: 15 QIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYVPRSIFVDLEPTVVD 74
Query: 182 SVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGF 358
+R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +R+ +++C LQGF
Sbjct: 75 EIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADNCSGLQGF 133
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 121 bits (291), Expect = 3e-28
Identities = 51/119 (42%), Positives = 77/119 (64%)
Frame = +2
Query: 2 QIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMD 181
QIG WE+ EHGI P G S + E ++++ G+YVPR+I VDLEP +D
Sbjct: 15 QIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYVPRSIFVDLEPTVVD 74
Query: 182 SVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGF 358
+R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +R+ +++C LQGF
Sbjct: 75 EIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADNCSGLQGF 133
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 116 bits (280), Expect = 7e-27
Identities = 54/122 (44%), Positives = 79/122 (64%), Gaps = 3/122 (2%)
Frame = +2
Query: 2 QIGAKFWEIISDEHGIDPTGAYHGDSDL---QLERINVYYNEASGGKYVPRAILVDLEPG 172
QIG WE+ EHGI P G YH + D + E IN ++ E +GGK+VPR + VDLEP
Sbjct: 21 QIGNACWELFCLEHGIQPDG-YHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPT 79
Query: 173 TMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQ 352
+D VR+G + +F P+ + G+ A N +A+G YT G E++D V+D V++ +E+C+ LQ
Sbjct: 80 VVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQ 139
Query: 353 GF 358
GF
Sbjct: 140 GF 141
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 116 bits (280), Expect = 7e-27
Identities = 48/119 (40%), Positives = 75/119 (63%)
Frame = +2
Query: 2 QIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMD 181
QIG WE+ EHGI P G + + ++++ G+YVPR+I VDLEP +D
Sbjct: 15 QIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYVPRSIFVDLEPTVVD 74
Query: 182 SVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGF 358
+R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+ LD +R+ +++C LQGF
Sbjct: 75 EIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRIRRLADNCSGLQGF 133
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 116 bits (280), Expect = 7e-27
Identities = 48/119 (40%), Positives = 75/119 (63%)
Frame = +2
Query: 2 QIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMD 181
QIG WE+ EHGI P G + + ++++ G+YVPR+I VDLEP +D
Sbjct: 15 QIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYVPRSIFVDLEPTVVD 74
Query: 182 SVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGF 358
+R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+ LD +R+ +++C LQGF
Sbjct: 75 EIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRIRRLADNCSGLQGF 133
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 116 bits (278), Expect = 1e-26
Identities = 52/121 (42%), Positives = 78/121 (64%), Gaps = 2/121 (1%)
Frame = +2
Query: 2 QIGAKFWEIISDEHGIDPTGAYHGDSDLQLE--RINVYYNEASGGKYVPRAILVDLEPGT 175
Q+G WE+ EHGI P G + + L ++ N +++E GK+VPRAI+VDLEP
Sbjct: 20 QMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAGKHVPRAIMVDLEPTP 79
Query: 176 MDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQG 355
+D +R+G + +F P+ + G+ A NN+A+GHYT G E++D V+D VR+ E+C LQG
Sbjct: 80 IDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVMDRVRRLVENCRGLQG 139
Query: 356 F 358
F
Sbjct: 140 F 140
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 114 bits (275), Expect = 3e-26
Identities = 49/121 (40%), Positives = 76/121 (62%), Gaps = 2/121 (1%)
Frame = +2
Query: 2 QIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKYVPRAILVDLEPGT 175
QIG WE+ EHGI P G D L + + +++E G++VPRA++VDLEP
Sbjct: 15 QIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRHVPRAVMVDLEPTV 74
Query: 176 MDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQG 355
+D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD +R+ +++C LQG
Sbjct: 75 IDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADNCTGLQG 134
Query: 356 F 358
F
Sbjct: 135 F 135
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 114 bits (275), Expect = 3e-26
Identities = 49/121 (40%), Positives = 76/121 (62%), Gaps = 2/121 (1%)
Frame = +2
Query: 2 QIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKYVPRAILVDLEPGT 175
QIG WE+ EHGI P G D L + + +++E G++VPRA++VDLEP
Sbjct: 14 QIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRHVPRAVMVDLEPTV 73
Query: 176 MDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQG 355
+D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD +R+ +++C LQG
Sbjct: 74 IDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADNCTGLQG 133
Query: 356 F 358
F
Sbjct: 134 F 134
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 114 bits (275), Expect = 3e-26
Identities = 49/121 (40%), Positives = 76/121 (62%), Gaps = 2/121 (1%)
Frame = +2
Query: 2 QIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKYVPRAILVDLEPGT 175
QIG WE+ EHGI P G D L + + +++E G++VPRA++VDLEP
Sbjct: 15 QIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRHVPRAVMVDLEPTV 74
Query: 176 MDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQG 355
+D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD +R+ +++C LQG
Sbjct: 75 IDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADNCTGLQG 134
Query: 356 F 358
F
Sbjct: 135 F 135
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 114 bits (275), Expect = 3e-26
Identities = 49/121 (40%), Positives = 76/121 (62%), Gaps = 2/121 (1%)
Frame = +2
Query: 2 QIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKYVPRAILVDLEPGT 175
QIG WE+ EHGI P G D L + + +++E G++VPRA++VDLEP
Sbjct: 15 QIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRHVPRAVMVDLEPTV 74
Query: 176 MDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQG 355
+D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD +R+ +++C LQG
Sbjct: 75 IDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADNCTGLQG 134
Query: 356 F 358
F
Sbjct: 135 F 135
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 108 bits (259), Expect = 2e-24
Identities = 47/119 (39%), Positives = 76/119 (63%)
Frame = +2
Query: 2 QIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMD 181
QIG WE+ EHGI P G + D + ++++ G++VPR+I VDLEP +D
Sbjct: 15 QIGNACWELYCLEHGILPDGTSM-EPDGNSGSLGTFFSDTGYGRHVPRSIFVDLEPTVVD 73
Query: 182 SVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGF 358
+R+G + ++F P+ + G+ A NN+A+GHYT G E++D+ LD +R+ + +C+ LQGF
Sbjct: 74 EIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLDRIRRLANNCEGLQGF 132
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 107 bits (257), Expect = 4e-24
Identities = 49/110 (44%), Positives = 73/110 (66%), Gaps = 3/110 (2%)
Frame = +2
Query: 38 EHGIDPTGAYHGDSDL---QLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQ 208
EHGI P G YH + D + E IN ++ E +GGK+VPR + VDLEP +D VR+G +
Sbjct: 5 EHGIQPDG-YHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYRS 63
Query: 209 IFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGF 358
+F P+ + G+ A N +A+G YT G E++D V+D V++ +E+C+ LQGF
Sbjct: 64 LFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGF 113
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 89.4 bits (212), Expect = 1e-18
Identities = 44/121 (36%), Positives = 71/121 (58%), Gaps = 3/121 (2%)
Frame = +2
Query: 2 QIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMD 181
Q+ FW+ + DEHGI+ G + D+ ++ ++Y +A YVPRA+LVDLEP ++
Sbjct: 18 QLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRAVLVDLEPRVIN 76
Query: 182 SVRSGP-FGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQ 352
+ P F +F DN GAGNNWA G Y +G E+ + ++D++ +E+E+ + L
Sbjct: 77 GMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDIIIREAENTNNLD 135
Query: 353 G 355
G
Sbjct: 136 G 136
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 89.4 bits (212), Expect = 1e-18
Identities = 44/121 (36%), Positives = 71/121 (58%), Gaps = 3/121 (2%)
Frame = +2
Query: 2 QIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMD 181
Q+ FW+ + DEHGI+ G + D+ ++ ++Y +A YVPRA+LVDLEP ++
Sbjct: 18 QLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRAVLVDLEPRVIN 76
Query: 182 SVRSGP-FGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQ 352
+ P F +F DN GAGNNWA G Y +G E+ + ++D++ +E+E+ + L
Sbjct: 77 GMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDIIIREAENTNNLD 135
Query: 353 G 355
G
Sbjct: 136 G 136
>U28943-17|AAK68292.2| 811|Caenorhabditis elegans Clc-type
chloride channel protein3, isoform b protein.
Length = 811
Score = 29.1 bits (62), Expect = 1.7
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Frame = -2
Query: 292 LSALCVVSLGPVVTGAGLSENK-----VVRAEYLSERSRTNRVHGAGLEVDEDGAGHVLA 128
LSA+C + P G+G+ E K V+ EYLS R+ +++ G L + G+G +
Sbjct: 180 LSAVCAHYIAPQAIGSGIPEMKTILRGVILKEYLSVRTLLSKMIGLTLSL---GSGLPMG 236
Query: 127 SGGLIVINIDALKLQV-RIAVVCTGGV 50
G V + Q+ R+ +GG+
Sbjct: 237 KEGPFVHVASVVASQLTRLVHGSSGGI 263
>U28943-16|AAK68291.1| 1001|Caenorhabditis elegans Clc-type
chloride channel protein3, isoform a protein.
Length = 1001
Score = 29.1 bits (62), Expect = 1.7
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Frame = -2
Query: 292 LSALCVVSLGPVVTGAGLSENK-----VVRAEYLSERSRTNRVHGAGLEVDEDGAGHVLA 128
LSA+C + P G+G+ E K V+ EYLS R+ +++ G L + G+G +
Sbjct: 109 LSAVCAHYIAPQAIGSGIPEMKTILRGVILKEYLSVRTLLSKMIGLTLSL---GSGLPMG 165
Query: 127 SGGLIVINIDALKLQV-RIAVVCTGGV 50
G V + Q+ R+ +GG+
Sbjct: 166 KEGPFVHVASVVASQLTRLVHGSSGGI 192
>AF319614-1|AAG49524.1| 1001|Caenorhabditis elegans CLC-type
chloride channel CLH-3b protein.
Length = 1001
Score = 29.1 bits (62), Expect = 1.7
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Frame = -2
Query: 292 LSALCVVSLGPVVTGAGLSENK-----VVRAEYLSERSRTNRVHGAGLEVDEDGAGHVLA 128
LSA+C + P G+G+ E K V+ EYLS R+ +++ G L + G+G +
Sbjct: 109 LSAVCAHYIAPQAIGSGIPEMKTILRGVILKEYLSVRTLLSKMIGLTLSL---GSGLPMG 165
Query: 127 SGGLIVINIDALKLQV-RIAVVCTGGV 50
G V + Q+ R+ +GG+
Sbjct: 166 KEGPFVHVASVVASQLTRLVHGSSGGI 192
>AF173172-1|AAF13165.1| 811|Caenorhabditis elegans CLC chloride
channel protein protein.
Length = 811
Score = 29.1 bits (62), Expect = 1.7
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Frame = -2
Query: 292 LSALCVVSLGPVVTGAGLSENK-----VVRAEYLSERSRTNRVHGAGLEVDEDGAGHVLA 128
LSA+C + P G+G+ E K V+ EYLS R+ +++ G L + G+G +
Sbjct: 180 LSAVCAHYIAPQAIGSGIPEMKTILRGVILKEYLSVRTLLSKMIGLTLSL---GSGLPMG 236
Query: 127 SGGLIVINIDALKLQV-RIAVVCTGGV 50
G V + Q+ R+ +GG+
Sbjct: 237 KEGPFVHVASVVASQLTRLVHGSSGGI 263
>U41105-5|AAA82398.1| 390|Caenorhabditis elegans Hypothetical
protein T02G5.7 protein.
Length = 390
Score = 28.7 bits (61), Expect = 2.3
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = -2
Query: 142 GHVLASGGLIVINIDALKL---QVRIAVVCTGGVDAVLV 35
GH L GL ++N A L Q+ +A +C GG +A V
Sbjct: 347 GHPLGMSGLRIVNSLAYSLAPGQLGVAAICNGGGEATAV 385
>Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical
protein K01A6.2 protein.
Length = 1092
Score = 27.9 bits (59), Expect = 3.9
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +2
Query: 26 IISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDL 163
I S+ H I T + H DS R + GG + R IL+D+
Sbjct: 101 IASEHHHISTTSSCHSDSGNSSSRDVITPFTVHGGASIGRLILIDI 146
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,029,857
Number of Sequences: 27780
Number of extensions: 194590
Number of successful extensions: 686
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 673
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 860942358
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -