Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0006_B01
(355 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC11E10.02c |gpi8||pig-K|Schizosaccharomyces pombe|chr 3|||Manual 29 0.21
SPAC24C9.11 |||MIF4G/MA4 domain protein|Schizosaccharomyces pomb... 28 0.37
SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1 |Schizo... 26 2.0
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 25 2.6
SPBC21.01 |mis17|SPBC776.19|kinetochore protein Mis17|Schizosacc... 25 3.4
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 25 3.4
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 25 4.5
SPBC32H8.13c |mok12||alpha-1,3-glucan synthase Mok12|Schizosacch... 25 4.5
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 24 6.0
SPBC2G5.04c |||COPII-coated vesicle component Erv41 |Schizosacch... 24 7.9
SPCC11E10.05c |ynd1||nucleoside diphosphatase |Schizosaccharomyc... 24 7.9
SPBC1D7.03 |mug80||cyclin Clg1 |Schizosaccharomyces pombe|chr 2|... 24 7.9
>SPCC11E10.02c |gpi8||pig-K|Schizosaccharomyces pombe|chr 3|||Manual
Length = 380
Score = 29.1 bits (62), Expect = 0.21
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -1
Query: 118 SMGFSAYCDGVPDGKAFGCTPYRSTVPPTR 29
S F A D DGK FG + +S +PPTR
Sbjct: 317 SFVFQAQNDMQDDGKGFGISNLKSFLPPTR 346
>SPAC24C9.11 |||MIF4G/MA4 domain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 775
Score = 28.3 bits (60), Expect = 0.37
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = +1
Query: 121 GEDVFDTGRFWSELSSELRELDNMLADFYRKFPTPASSSQGIEGNEYKVTIPLTSFDEK 297
G++ ++ + E S+ EL++ D +RK T SSQ + E K+ P+ +F K
Sbjct: 50 GKNGYENRKITEEGDSKSSELNDDYLDAHRKSSTKKKSSQNKQAKESKLLDPI-AFQHK 107
>SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1336
Score = 25.8 bits (54), Expect = 2.0
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +1
Query: 58 GYNQMPFHPEHHHNRLRSPYFGEDVFDTGRFWSEL 162
GY+ + F E+H N LR + + F FW+ L
Sbjct: 975 GYSVLSFFRENHKNSLRKSW---EAFKRRAFWTSL 1006
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 25.4 bits (53), Expect = 2.6
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +3
Query: 231 IVSRHRRQRIQGDYTFNLL**EGHRCQSPDRSSDGASC 344
++S++ +R++ DY NL+ GH S + SS C
Sbjct: 81 VISQNDEKRVEKDYLINLIDSPGHVDFSSEVSSASRLC 118
>SPBC21.01 |mis17|SPBC776.19|kinetochore protein
Mis17|Schizosaccharomyces pombe|chr 2|||Manual
Length = 441
Score = 25.0 bits (52), Expect = 3.4
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1
Query: 160 LSSELRELDNMLADFYRKF 216
L S+L EL ++L FY+KF
Sbjct: 421 LESQLVELQSLLTQFYQKF 439
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 25.0 bits (52), Expect = 3.4
Identities = 14/50 (28%), Positives = 19/50 (38%)
Frame = +2
Query: 107 EAHTSARTSSIPVGSGPNSPASYASWXXXXXXXXXXXXXXXXXLKASKAT 256
E +SA TSS+ P S +S +SW +S AT
Sbjct: 931 ETSSSAITSSVAASVTPTSSSSASSWSSSSEVDPSTAASATGSSTSSIAT 980
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 24.6 bits (51), Expect = 4.5
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1
Query: 157 ELSSELRELDNMLADFYRKFPT 222
EL +EL DN+LA R+F T
Sbjct: 590 ELKAELNLRDNLLASMQREFET 611
>SPBC32H8.13c |mok12||alpha-1,3-glucan synthase
Mok12|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2352
Score = 24.6 bits (51), Expect = 4.5
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +1
Query: 19 LAAAVSAAPYYGMGYNQMPFHPEHHH 96
++ A ++AP+ GY HPE+H+
Sbjct: 194 MSFANTSAPFSTKGYKMKYKHPEYHY 219
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 24.2 bits (50), Expect = 6.0
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +1
Query: 34 SAAPYYGMGYNQMPFHPEHHHNRLRSP 114
S Y+ NQ PF P HH L +P
Sbjct: 119 SPTSYHACSNNQSPF-PHSHHPPLHNP 144
>SPBC2G5.04c |||COPII-coated vesicle component Erv41
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 333
Score = 23.8 bits (49), Expect = 7.9
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +1
Query: 40 APYYGMGYNQMPFHPEHHHNRLRSPYFGE 126
AP +G G + +PFH + + + FGE
Sbjct: 171 APGWGYGRSNIPFHSLNFTHYIEELSFGE 199
>SPCC11E10.05c |ynd1||nucleoside diphosphatase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 572
Score = 23.8 bits (49), Expect = 7.9
Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 7/76 (9%)
Frame = +1
Query: 115 YFGEDVFDTG------RFWSELSSEL-RELDNMLADFYRKFPTPASSSQGIEGNEYKVTI 273
Y DVFD G F+ ++ E + ML+ Y K TP++ +E +K +
Sbjct: 317 YTTNDVFDMGGSYHFPNFYKKVDEYCGTEWETMLSRLYNKELTPSTDENKLEKLCFKASW 376
Query: 274 PLTSFDEKDIVVKART 321
L E V K+ T
Sbjct: 377 ALNVLHEGFDVPKSNT 392
>SPBC1D7.03 |mug80||cyclin Clg1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 461
Score = 23.8 bits (49), Expect = 7.9
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 19 LAAAVSAAPYYGMGYNQMPFHP 84
+AA +S AP YG+G + F P
Sbjct: 40 VAALLSHAPMYGLGQRRPSFLP 61
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,460,179
Number of Sequences: 5004
Number of extensions: 25631
Number of successful extensions: 75
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 75
length of database: 2,362,478
effective HSP length: 65
effective length of database: 2,037,218
effective search space used: 105935336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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