Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0006_B01
(355 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032630-4|CAA21561.1| 212|Caenorhabditis elegans Hypothetical ... 32 0.10
Z81015-4|CAB02658.2| 1170|Caenorhabditis elegans Hypothetical pr... 29 0.93
U58756-3|AAC48084.2| 181|Caenorhabditis elegans Hypothetical pr... 29 1.2
U58756-2|AAC48083.2| 322|Caenorhabditis elegans Hypothetical pr... 29 1.2
Z78018-7|CAB01449.2| 2577|Caenorhabditis elegans Hypothetical pr... 27 5.0
Z78013-10|CAB01427.2| 2577|Caenorhabditis elegans Hypothetical p... 27 5.0
L13200-2|ABE73330.1| 810|Caenorhabditis elegans Hypothetical pr... 27 5.0
L13200-1|AAA28193.1| 1000|Caenorhabditis elegans Hypothetical pr... 27 5.0
AY314773-1|AAQ84880.1| 2596|Caenorhabditis elegans flamingo-like... 27 5.0
Z54284-4|CAA91061.1| 1001|Caenorhabditis elegans Hypothetical pr... 26 6.6
U41268-5|AAA82438.1| 349|Caenorhabditis elegans Hypothetical pr... 26 6.6
AF326941-1|AAG49391.1| 139|Caenorhabditis elegans 5H1 protein. 26 6.6
AF125955-7|AAD14713.1| 139|Caenorhabditis elegans Hypothetical ... 26 6.6
Z83318-1|CAB05902.1| 1358|Caenorhabditis elegans Hypothetical pr... 26 8.7
AC024790-11|AAF60631.1| 199|Caenorhabditis elegans Hypothetical... 26 8.7
>AL032630-4|CAA21561.1| 212|Caenorhabditis elegans Hypothetical
protein Y62H9A.4 protein.
Length = 212
Score = 32.3 bits (70), Expect = 0.10
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 ALFVLCLAAAVSAAPYYGMGYNQMPFHPEHHHNRLRSPYFGEDVFDTGRFWSELSSELRE 180
ALF+ +A AV + Y + +P HH N + Y D D+ +EL S
Sbjct: 3 ALFLSVIACAVVVSANQYNDYGTISHYPGHHSN---NRYSTSDSSDSSE--NELKSRSNS 57
Query: 181 LDNMLADFYRKF-PTPASSSQGIEGNEYK 264
D ++ + P P +++ G GNEY+
Sbjct: 58 -DERYPEYPGVYAPQPPATNYGTNGNEYR 85
>Z81015-4|CAB02658.2| 1170|Caenorhabditis elegans Hypothetical protein
C11E4.6 protein.
Length = 1170
Score = 29.1 bits (62), Expect = 0.93
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = -2
Query: 84 RMERHLVVPHTVVRCRRHGRSKTENK 7
RM++ L + T+VRCR + + TEN+
Sbjct: 1143 RMDKSLPIEGTMVRCRHNSQQTTENQ 1168
>U58756-3|AAC48084.2| 181|Caenorhabditis elegans Hypothetical
protein F58F9.3a protein.
Length = 181
Score = 28.7 bits (61), Expect = 1.2
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +1
Query: 175 RELDNMLADFYRKFPTPASSSQGIEGNEYKVTIPLTSFDEKDI 303
+ D +L F + +++QG+E YK+T+ EKD+
Sbjct: 93 KNADGILVFSTNNFASAKATNQGLEIGRYKITVQAVKPSEKDL 135
>U58756-2|AAC48083.2| 322|Caenorhabditis elegans Hypothetical
protein F58F9.3b protein.
Length = 322
Score = 28.7 bits (61), Expect = 1.2
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +1
Query: 175 RELDNMLADFYRKFPTPASSSQGIEGNEYKVTIPLTSFDEKDI 303
+ D +L F + +++QG+E YK+T+ EKD+
Sbjct: 93 KNADGILVFSTNNFASAKATNQGLEIGRYKITVQAVKPSEKDL 135
>Z78018-7|CAB01449.2| 2577|Caenorhabditis elegans Hypothetical
protein F15B9.7 protein.
Length = 2577
Score = 26.6 bits (56), Expect = 5.0
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = -2
Query: 207 VEVGEHVVQLA*LAGEFGPEPTGIEDVLAEVWASQPIVMVFRMER 73
+ VG +Q++ + + GP GI D +S P + +FR++R
Sbjct: 797 IPVGTSFLQVSAIDADIGPN--GIVDYFLNESSSSPSIQLFRLDR 839
>Z78013-10|CAB01427.2| 2577|Caenorhabditis elegans Hypothetical
protein F15B9.7 protein.
Length = 2577
Score = 26.6 bits (56), Expect = 5.0
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = -2
Query: 207 VEVGEHVVQLA*LAGEFGPEPTGIEDVLAEVWASQPIVMVFRMER 73
+ VG +Q++ + + GP GI D +S P + +FR++R
Sbjct: 797 IPVGTSFLQVSAIDADIGPN--GIVDYFLNESSSSPSIQLFRLDR 839
>L13200-2|ABE73330.1| 810|Caenorhabditis elegans Hypothetical
protein ZK1236.3b protein.
Length = 810
Score = 26.6 bits (56), Expect = 5.0
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = +1
Query: 157 ELSSELRELDNMLADFYRKFPTPASSSQGIEGNEYKVTIPLTSFDEKDIVVKARTGLL 330
E+ S E + A F + P+P IEG + IP TS ++ + +RT ++
Sbjct: 268 EMPSLTVEAPSEEASFEAEQPSPQVPQASIEGPSQQQQIPGTSQQKRQVARGSRTNMI 325
>L13200-1|AAA28193.1| 1000|Caenorhabditis elegans Hypothetical
protein ZK1236.3a protein.
Length = 1000
Score = 26.6 bits (56), Expect = 5.0
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = +1
Query: 157 ELSSELRELDNMLADFYRKFPTPASSSQGIEGNEYKVTIPLTSFDEKDIVVKARTGLL 330
E+ S E + A F + P+P IEG + IP TS ++ + +RT ++
Sbjct: 458 EMPSLTVEAPSEEASFEAEQPSPQVPQASIEGPSQQQQIPGTSQQKRQVARGSRTNMI 515
>AY314773-1|AAQ84880.1| 2596|Caenorhabditis elegans flamingo-like
protein FMI-1 protein.
Length = 2596
Score = 26.6 bits (56), Expect = 5.0
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = -2
Query: 207 VEVGEHVVQLA*LAGEFGPEPTGIEDVLAEVWASQPIVMVFRMER 73
+ VG +Q++ + + GP GI D +S P + +FR++R
Sbjct: 797 IPVGTSFLQVSAIDADIGPN--GIVDYFLNESSSSPSIQLFRLDR 839
>Z54284-4|CAA91061.1| 1001|Caenorhabditis elegans Hypothetical
protein D2085.4 protein.
Length = 1001
Score = 26.2 bits (55), Expect = 6.6
Identities = 11/40 (27%), Positives = 22/40 (55%)
Frame = +1
Query: 61 YNQMPFHPEHHHNRLRSPYFGEDVFDTGRFWSELSSELRE 180
+N + EHH +RS ED+ + GR + +++ L++
Sbjct: 303 FNSLAVFLEHHSKIMRSLNVKEDLSEFGRLRTSVNNHLKQ 342
>U41268-5|AAA82438.1| 349|Caenorhabditis elegans Hypothetical
protein T14G12.6 protein.
Length = 349
Score = 26.2 bits (55), Expect = 6.6
Identities = 18/70 (25%), Positives = 34/70 (48%)
Frame = -2
Query: 216 ELSVEVGEHVVQLA*LAGEFGPEPTGIEDVLAEVWASQPIVMVFRMERHLVVPHTVVRCR 37
EL+ E+G+ + +A A P PT D L + + P +V + + + + RC+
Sbjct: 64 ELTCEIGDFPIAVAAFADSEIPPPTAAADELGILPPNSPEQIVLGLNAYYGL---LQRCK 120
Query: 36 RHGRSKTENK 7
+ + T+NK
Sbjct: 121 QWKANFTKNK 130
>AF326941-1|AAG49391.1| 139|Caenorhabditis elegans 5H1 protein.
Length = 139
Score = 26.2 bits (55), Expect = 6.6
Identities = 12/28 (42%), Positives = 13/28 (46%), Gaps = 2/28 (7%)
Frame = +1
Query: 46 YYGMGY--NQMPFHPEHHHNRLRSPYFG 123
Y G GY P H HHH PY+G
Sbjct: 109 YGGPGYGGGPGPHHHHHHHGPPPPPYYG 136
>AF125955-7|AAD14713.1| 139|Caenorhabditis elegans Hypothetical
protein F46E10.2 protein.
Length = 139
Score = 26.2 bits (55), Expect = 6.6
Identities = 12/28 (42%), Positives = 13/28 (46%), Gaps = 2/28 (7%)
Frame = +1
Query: 46 YYGMGY--NQMPFHPEHHHNRLRSPYFG 123
Y G GY P H HHH PY+G
Sbjct: 109 YGGPGYGGGPGPHHHHHHHGPPPPPYYG 136
>Z83318-1|CAB05902.1| 1358|Caenorhabditis elegans Hypothetical
protein F55B11.1 protein.
Length = 1358
Score = 25.8 bits (54), Expect = 8.7
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = +1
Query: 58 GYNQMPFHPEHHHNRLRSPYFGEDVFDTGR 147
GY M F +HHH + P +D+ R
Sbjct: 248 GYESMSFAYDHHHTKWYQPVSYDDLLSLKR 277
>AC024790-11|AAF60631.1| 199|Caenorhabditis elegans Hypothetical
protein Y47D7A.12 protein.
Length = 199
Score = 25.8 bits (54), Expect = 8.7
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +3
Query: 12 SLSCCGRVGGTVLRYGVQPNAFPSGTPS 95
SLS G VGG L YG N+ +GTP+
Sbjct: 121 SLSSGGIVGGNSLNYGTY-NSASAGTPA 147
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,334,798
Number of Sequences: 27780
Number of extensions: 153046
Number of successful extensions: 512
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 497
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 511
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 471339352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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