Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_A17
         (503 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    25   0.45 
DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex det...    23   1.8  
DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex det...    23   1.8  
DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex det...    23   1.8  
DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex det...    23   1.8  
DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex det...    23   1.8  
DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex det...    23   1.8  
DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex det...    23   1.8  
DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex det...    23   1.8  
DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    22   3.2  
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    21   9.6  

>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 25.0 bits (52), Expect = 0.45
 Identities = 12/54 (22%), Positives = 28/54 (51%)
 Frame = -3

Query: 291 SNHQAMEYFNYVSLNYTYILQWKLFIITSIQRSYLTALHITVSYFLNLFQDYNQ 130
           SN Q  EYF     +  Y ++  + I+  ++ SY++ ++   +Y +  F++  +
Sbjct: 249 SNKQRFEYFTRTIPSDHYQVKAMVEIVMKMKWSYVSIIYEESNYGIKAFEELEE 302


>DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 5/16 (31%), Positives = 14/16 (87%)
 Frame = -3

Query: 297 YNSNHQAMEYFNYVSL 250
           YN+N++ ++Y+N +++
Sbjct: 101 YNTNYKKLQYYNIINI 116


>DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 5/16 (31%), Positives = 14/16 (87%)
 Frame = -3

Query: 297 YNSNHQAMEYFNYVSL 250
           YN+N++ ++Y+N +++
Sbjct: 101 YNTNYKKLQYYNIINI 116


>DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 5/16 (31%), Positives = 14/16 (87%)
 Frame = -3

Query: 297 YNSNHQAMEYFNYVSL 250
           YN+N++ ++Y+N +++
Sbjct: 101 YNTNYKKLQYYNIINI 116


>DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 5/16 (31%), Positives = 14/16 (87%)
 Frame = -3

Query: 297 YNSNHQAMEYFNYVSL 250
           YN+N++ ++Y+N +++
Sbjct: 101 YNTNYKKLQYYNIINI 116


>DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 5/16 (31%), Positives = 14/16 (87%)
 Frame = -3

Query: 297 YNSNHQAMEYFNYVSL 250
           YN+N++ ++Y+N +++
Sbjct: 101 YNTNYKKLQYYNIINI 116


>DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 5/16 (31%), Positives = 14/16 (87%)
 Frame = -3

Query: 297 YNSNHQAMEYFNYVSL 250
           YN+N++ ++Y+N +++
Sbjct: 101 YNTNYKKLQYYNIINI 116


>DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 5/16 (31%), Positives = 14/16 (87%)
 Frame = -3

Query: 297 YNSNHQAMEYFNYVSL 250
           YN+N++ ++Y+N +++
Sbjct: 105 YNTNYKKLQYYNIINI 120


>DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 5/16 (31%), Positives = 14/16 (87%)
 Frame = -3

Query: 297 YNSNHQAMEYFNYVSL 250
           YN+N++ ++Y+N +++
Sbjct: 101 YNTNYKKLQYYNIINI 116


>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 8/27 (29%), Positives = 18/27 (66%)
 Frame = -2

Query: 304 ANIQF*PSSYGIFQLCFFKLHLHFTME 224
           A I F P+S+G+  +C++ +++ +  E
Sbjct: 472 ARIVF-PASFGLLNICYWVIYVTYQEE 497


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 297 YNSNHQAMEYFNYVSLNY 244
           YN+N+    Y NY + NY
Sbjct: 329 YNNNNYNNNYNNYNNNNY 346


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,377
Number of Sequences: 438
Number of extensions: 2856
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13864083
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)