Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_A15
         (570 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    30   0.019
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    23   2.8  
AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     22   3.7  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    21   6.5  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    21   6.5  

>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 29.9 bits (64), Expect = 0.019
 Identities = 21/70 (30%), Positives = 33/70 (47%)
 Frame = +1

Query: 352 HETQVLDLSECQLMQVPDAVYHLMRHTELKSCDLSGNVITKIPPKFAVKFSLITDLKLSN 531
           +    L+LS+ +L  V   +++ +    L    LSGN I  I P      S + +L LS 
Sbjct: 383 YNLHTLELSDNKLRTVGAQLFNGL--FVLNRLTLSGNAIASIDPLAFRNCSDLKELDLSG 440

Query: 532 NPMAKLPDEL 561
           N +  +PD L
Sbjct: 441 NELTSVPDAL 450



 Score = 27.9 bits (59), Expect = 0.075
 Identities = 24/70 (34%), Positives = 31/70 (44%)
 Frame = +1

Query: 340 CEDAHETQVLDLSECQLMQVPDAVYHLMRHTELKSCDLSGNVITKIPPKFAVKFSLITDL 519
           C D  E   LDLS  +L  VPDA+  L     LK+ DL  N I+            +T L
Sbjct: 430 CSDLKE---LDLSGNELTSVPDALRDL---ALLKTLDLGENRISNFYNGSFRNLDQLTGL 483

Query: 520 KLSNNPMAKL 549
           +L  N +  L
Sbjct: 484 RLIGNDIGNL 493


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +2

Query: 374 YPNAS*CKYLMQYITLCDTQ 433
           YPNAS   Y   Y   C T+
Sbjct: 438 YPNASVTPYNKNYTKFCSTE 457


>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -1

Query: 315 QSHGKNLFTFPNKNLYLLTQ 256
           Q +G N+  F N N++ L Q
Sbjct: 157 QMNGNNITNFKNSNIFQLKQ 176


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -1

Query: 486 LWRNFSNNIPTEITTFEFCVS 424
           +WRN S   PT    F   VS
Sbjct: 58  IWRNPSMQTPTNYYLFNLAVS 78


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 11/52 (21%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
 Frame = -2

Query: 524 SFRSVIKLNLTANFGGIL--VITFPLRSQLLSSVCRIR*YTASGTCISWHSD 375
           S R  + L  T N+  +   ++T P+R  +  ++C    +   G  + W ++
Sbjct: 379 SDRMPVFLLXTLNYTDVXFRILTMPVRDAIAGTICENSAWGFVGNSLWWENN 430


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,045
Number of Sequences: 438
Number of extensions: 3172
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16381902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)