Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_A13
         (618 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    28   0.084
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    22   5.5  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    21   7.3  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    21   9.6  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 27.9 bits (59), Expect = 0.084
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +3

Query: 156 LNSIQTAVKAIQTAVRKAGIAKLHGISGDTNVQGEQ 263
           +  +Q  V+ +QTA    G+  + G+ G   VQG Q
Sbjct: 837 VQGVQQGVQGVQTAQGVQGVQGVQGVQGVQGVQGVQ 872


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = +3

Query: 66  AFDVNAMTLTRWVLAQQRTAPTATGDLTQL 155
           AFD+N   L + V      A T  G+L  L
Sbjct: 161 AFDLNTSQLLKQVEIPHDVATTGKGELVSL 190


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +3

Query: 225 HGISGDTNVQGEQVKKLDVLSNDLFINMLK 314
           +GISG+T+V   Q+   D L N   +  +K
Sbjct: 141 NGISGETSVCPSQIVVFD-LKNSKLLKQVK 169


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = +3

Query: 234 SGDTNVQGEQVKKLDVLSNDLFINMLKSSFTACLLVSEE 350
           S + N + E+   +D L NDLF    K     CL   E+
Sbjct: 85  SKEVNDKKEENFIVDRLRNDLFECENKEKSNVCLKFEEQ 123


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,390
Number of Sequences: 438
Number of extensions: 3868
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18337950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)