Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_A08
         (363 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81564-9|CAB04575.1|  724|Caenorhabditis elegans Hypothetical pr...    27   4.0  
Z73972-10|CAA98263.2|  388|Caenorhabditis elegans Hypothetical p...    27   4.0  
AL021474-8|CAA16310.2|  388|Caenorhabditis elegans Hypothetical ...    27   4.0  
U23520-3|AAC46555.2|  470|Caenorhabditis elegans Hypothetical pr...    26   9.3  
U23520-2|AAR25655.1|  485|Caenorhabditis elegans Hypothetical pr...    26   9.3  

>Z81564-9|CAB04575.1|  724|Caenorhabditis elegans Hypothetical
           protein K05C4.9 protein.
          Length = 724

 Score = 27.1 bits (57), Expect = 4.0
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = -2

Query: 338 VRVLTTCNNHNKVDIFKYTNIIIMDI 261
           +R L   N +N VD+F+ TN+ ++D+
Sbjct: 210 IRYLEFANANNLVDLFQLTNLKVLDM 235


>Z73972-10|CAA98263.2|  388|Caenorhabditis elegans Hypothetical
           protein F15H10.4 protein.
          Length = 388

 Score = 27.1 bits (57), Expect = 4.0
 Identities = 10/41 (24%), Positives = 24/41 (58%)
 Frame = +1

Query: 169 SKSFCNSSNYEMIFNSIVVRPNLHKCVYWVIISIIIMLVYL 291
           SK     ++YE IF SI +  +++  + W+++  + ++ +L
Sbjct: 125 SKCRLGYTDYERIFRSIQLILDVNFVILWILLPFVYLIAFL 165


>AL021474-8|CAA16310.2|  388|Caenorhabditis elegans Hypothetical
           protein F15H10.4 protein.
          Length = 388

 Score = 27.1 bits (57), Expect = 4.0
 Identities = 10/41 (24%), Positives = 24/41 (58%)
 Frame = +1

Query: 169 SKSFCNSSNYEMIFNSIVVRPNLHKCVYWVIISIIIMLVYL 291
           SK     ++YE IF SI +  +++  + W+++  + ++ +L
Sbjct: 125 SKCRLGYTDYERIFRSIQLILDVNFVILWILLPFVYLIAFL 165


>U23520-3|AAC46555.2|  470|Caenorhabditis elegans Hypothetical
           protein C35B8.3a protein.
          Length = 470

 Score = 25.8 bits (54), Expect = 9.3
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +2

Query: 50  ENHLKRI*QSNINHIIYNGCPQNITFIDIIYHYNVL 157
           E+H++R   SN+N +I    P+  T I+  +  NVL
Sbjct: 211 ESHMRRC-ISNVNRMIDQATPETRTVIEKAFFKNVL 245


>U23520-2|AAR25655.1|  485|Caenorhabditis elegans Hypothetical
           protein C35B8.3b protein.
          Length = 485

 Score = 25.8 bits (54), Expect = 9.3
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +2

Query: 50  ENHLKRI*QSNINHIIYNGCPQNITFIDIIYHYNVL 157
           E+H++R   SN+N +I    P+  T I+  +  NVL
Sbjct: 226 ESHMRRC-ISNVNRMIDQATPETRTVIEKAFFKNVL 260


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,763,702
Number of Sequences: 27780
Number of extensions: 109619
Number of successful extensions: 264
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 261
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 264
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 503476126
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)