Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_A08
         (363 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex det...    21   5.9  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      20   7.8  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     20   7.8  

>DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +3

Query: 258 NYIHNYNVSIFKDVNFI 308
           N  +NYN  ++ ++N+I
Sbjct: 99  NNYNNYNKKLYYNINYI 115


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = -2

Query: 353 LCFYFVRVLTTCNNHNKV 300
           LC    R L + NNH  +
Sbjct: 406 LCHKVFRTLNSLNNHKSI 423


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -3

Query: 136 DINEGDILRTSIINNMVDVTLLNP 65
           DINEG     + +    D  LLNP
Sbjct: 325 DINEGSNYMQTRVPAWCDRVLLNP 348


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,517
Number of Sequences: 438
Number of extensions: 1621
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8556345
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)