Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0006_A07
(601 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC057240-1|AAH57240.1| 396|Homo sapiens mitochondrial ribosomal... 137 3e-32
BC047784-1|AAH47784.1| 302|Homo sapiens MRPS9 protein protein. 102 1e-21
BC112003-1|AAI12004.1| 292|Homo sapiens RWD domain containing 2... 32 1.8
BC104816-1|AAI04817.1| 292|Homo sapiens RWD domain containing 2... 32 1.8
BC010930-1|AAH10930.1| 292|Homo sapiens RWD domain containing 2... 32 1.8
AL049699-2|CAB52345.1| 292|Homo sapiens protein ( Human DNA seq... 32 1.8
X75304-1|CAA53052.1| 3259|Homo sapiens giantin protein. 29 9.4
D25542-1|BAA05025.1| 3225|Homo sapiens golgi antigen gcp372 prot... 29 9.4
BC036035-1|AAH36035.1| 979|Homo sapiens DHX36 protein protein. 29 9.4
AJ577134-1|CAE11803.1| 994|Homo sapiens putative DExH/D RNA hel... 29 9.4
AJ577133-1|CAE11802.1| 1008|Homo sapiens putative DExH/D RNA hel... 29 9.4
AF217190-1|AAG36783.1| 1008|Homo sapiens MLEL1 protein protein. 29 9.4
AB040921-1|BAA96012.1| 852|Homo sapiens KIAA1488 protein protein. 29 9.4
>BC057240-1|AAH57240.1| 396|Homo sapiens mitochondrial ribosomal
protein S9 protein.
Length = 396
Score = 137 bits (331), Expect = 3e-32
Identities = 55/94 (58%), Positives = 79/94 (84%)
Frame = +1
Query: 277 DEFMKRQQVEYKLGKRHLANMMGEDPETFTQKDVDRAIEYLFPSGIYDSAARPLMKPPEE 456
++F+K+Q E+ +GKRHLANMMGEDPETFTQ+D+DRAI YLFPSG+++ ARP+MK PE+
Sbjct: 71 EDFIKKQIEEFNIGKRHLANMMGEDPETFTQEDIDRAIAYLFPSGLFEKRARPVMKHPEQ 130
Query: 457 VFPARKAAEFDEAGRPHHFLFYTG*PNFFKLLYD 558
+FP ++A ++ E GRP H+LFYTG +++ L++D
Sbjct: 131 IFPRQRAIQWGEDGRPFHYLFYTGKQSYYSLMHD 164
>BC047784-1|AAH47784.1| 302|Homo sapiens MRPS9 protein protein.
Length = 302
Score = 102 bits (244), Expect = 1e-21
Identities = 40/70 (57%), Positives = 58/70 (82%)
Frame = +1
Query: 349 DPETFTQKDVDRAIEYLFPSGIYDSAARPLMKPPEEVFPARKAAEFDEAGRPHHFLFYTG 528
DPETFTQ+D+DRAI YLFPSG+++ ARP+MK PE++FP ++A ++ E GRP H+LFYTG
Sbjct: 1 DPETFTQEDIDRAIAYLFPSGLFEKRARPVMKHPEQIFPRQRAIQWGEDGRPFHYLFYTG 60
Query: 529 *PNFFKLLYD 558
+++ L++D
Sbjct: 61 KQSYYSLMHD 70
>BC112003-1|AAI12004.1| 292|Homo sapiens RWD domain containing 2A
protein.
Length = 292
Score = 31.9 bits (69), Expect = 1.8
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = -2
Query: 378 NIFLRESLWIFSHHISQMSLTKLVLNL 298
N FLR +WI+SHHI Q L K +L++
Sbjct: 153 NTFLR--MWIYSHHIYQQDLRKKILDV 177
>BC104816-1|AAI04817.1| 292|Homo sapiens RWD domain containing 2A
protein.
Length = 292
Score = 31.9 bits (69), Expect = 1.8
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = -2
Query: 378 NIFLRESLWIFSHHISQMSLTKLVLNL 298
N FLR +WI+SHHI Q L K +L++
Sbjct: 153 NTFLR--MWIYSHHIYQQDLRKKILDV 177
>BC010930-1|AAH10930.1| 292|Homo sapiens RWD domain containing 2
protein.
Length = 292
Score = 31.9 bits (69), Expect = 1.8
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = -2
Query: 378 NIFLRESLWIFSHHISQMSLTKLVLNL 298
N FLR +WI+SHHI Q L K +L++
Sbjct: 153 NTFLR--MWIYSHHIYQQDLRKKILDV 177
>AL049699-2|CAB52345.1| 292|Homo sapiens protein ( Human DNA
sequence from clone RP4-747H23 on chromosome 6q13-15
Contains the 3' end of the ME1 gene for malic enzyme 1
(NADP(+)-dependent, cytomalic enzyme 1,
NADP(+)-dependent, cytosolic).
Length = 292
Score = 31.9 bits (69), Expect = 1.8
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = -2
Query: 378 NIFLRESLWIFSHHISQMSLTKLVLNL 298
N FLR +WI+SHHI Q L K +L++
Sbjct: 153 NTFLR--MWIYSHHIYQQDLRKKILDV 177
>X75304-1|CAA53052.1| 3259|Homo sapiens giantin protein.
Length = 3259
Score = 29.5 bits (63), Expect = 9.4
Identities = 15/30 (50%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Frame = +1
Query: 220 KQKKISKAMKAYLE-RAKEHDEFMKRQQVE 306
+Q+ + KA+ LE +AKEHDE +K+ QVE
Sbjct: 1431 EQEDLIKALHTQLEMQAKEHDERIKQLQVE 1460
>D25542-1|BAA05025.1| 3225|Homo sapiens golgi antigen gcp372 protein.
Length = 3225
Score = 29.5 bits (63), Expect = 9.4
Identities = 15/30 (50%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Frame = +1
Query: 220 KQKKISKAMKAYLE-RAKEHDEFMKRQQVE 306
+Q+ + KA+ LE +AKEHDE +K+ QVE
Sbjct: 1397 EQEDLIKALHTQLEMQAKEHDERIKQLQVE 1426
>BC036035-1|AAH36035.1| 979|Homo sapiens DHX36 protein protein.
Length = 979
Score = 29.5 bits (63), Expect = 9.4
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +1
Query: 286 MKRQQVEYKLGKRHLANMMGEDPETFTQKDVDRAIEYLFPSGIYDSAAR 432
MK Q E+ LG +++ +DPE+ D ++ I+ + +G+Y A+
Sbjct: 768 MKGQFAEHLLGAGFVSSRNPKDPESNINSDNEKIIKAVICAGLYPKVAK 816
>AJ577134-1|CAE11803.1| 994|Homo sapiens putative DExH/D RNA
helicase protein.
Length = 994
Score = 29.5 bits (63), Expect = 9.4
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +1
Query: 286 MKRQQVEYKLGKRHLANMMGEDPETFTQKDVDRAIEYLFPSGIYDSAAR 432
MK Q E+ LG +++ +DPE+ D ++ I+ + +G+Y A+
Sbjct: 783 MKGQFAEHLLGAGFVSSRNPKDPESNINSDNEKIIKAVICAGLYPKVAK 831
>AJ577133-1|CAE11802.1| 1008|Homo sapiens putative DExH/D RNA
helicase protein.
Length = 1008
Score = 29.5 bits (63), Expect = 9.4
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +1
Query: 286 MKRQQVEYKLGKRHLANMMGEDPETFTQKDVDRAIEYLFPSGIYDSAAR 432
MK Q E+ LG +++ +DPE+ D ++ I+ + +G+Y A+
Sbjct: 797 MKGQFAEHLLGAGFVSSRNPKDPESNINSDNEKIIKAVICAGLYPKVAK 845
>AF217190-1|AAG36783.1| 1008|Homo sapiens MLEL1 protein protein.
Length = 1008
Score = 29.5 bits (63), Expect = 9.4
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +1
Query: 286 MKRQQVEYKLGKRHLANMMGEDPETFTQKDVDRAIEYLFPSGIYDSAAR 432
MK Q E+ LG +++ +DPE+ D ++ I+ + +G+Y A+
Sbjct: 797 MKGQFAEHLLGAGFVSSRNPKDPESNINSDNEKIIKAVICAGLYPKVAK 845
>AB040921-1|BAA96012.1| 852|Homo sapiens KIAA1488 protein protein.
Length = 852
Score = 29.5 bits (63), Expect = 9.4
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +1
Query: 286 MKRQQVEYKLGKRHLANMMGEDPETFTQKDVDRAIEYLFPSGIYDSAAR 432
MK Q E+ LG +++ +DPE+ D ++ I+ + +G+Y A+
Sbjct: 641 MKGQFAEHLLGAGFVSSRNPKDPESNINSDNEKIIKAVICAGLYPKVAK 689
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,442,040
Number of Sequences: 237096
Number of extensions: 1456612
Number of successful extensions: 3761
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3595
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3761
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6297951520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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