Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0006_A06
(575 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L06505-1|AAA36157.1| 165|Homo sapiens ribosomal protein L12 pro... 201 2e-51
BC105603-1|AAI05604.1| 165|Homo sapiens ribosomal protein L12 p... 201 2e-51
BC094831-1|AAH94831.1| 165|Homo sapiens ribosomal protein L12 p... 201 2e-51
BC050644-1|AAH50644.1| 165|Homo sapiens ribosomal protein L12 p... 201 2e-51
AL445222-15|CAH72929.1| 165|Homo sapiens ribosomal protein L12 ... 201 2e-51
AB209471-1|BAD92708.1| 197|Homo sapiens ribosomal protein L12 v... 199 5e-51
AL021366-3|CAA16156.1| 165|Homo sapiens cICK0721Q.2 (60S Riboso... 191 1e-48
BC059950-1|AAH59950.1| 132|Homo sapiens RPL12 protein protein. 143 3e-34
AB041941-1|BAD83595.1| 915|Homo sapiens G-protein coupled recep... 34 0.41
BX088650-2|CAM26293.1| 203|Homo sapiens kinesin family member C... 29 8.9
AL662799-3|CAM25565.1| 203|Homo sapiens kinesin family member C... 29 8.9
>L06505-1|AAA36157.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 201 bits (490), Expect = 2e-51
Identities = 93/123 (75%), Positives = 110/123 (89%)
Frame = +2
Query: 206 SPKKVGDDIAXATSDWKGLKITVQLIVQNRQAQISVVPSAAALIIRALKEPPRDRKKQKN 385
SPKKVGDDIA AT DWKGL+ITV+L +QNRQAQI VVPSA+ALII+ALKEPPRDRKKQKN
Sbjct: 38 SPKKVGDDIAKATGDWKGLRITVKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKN 97
Query: 386 IKHNGNITMEDVIGIAKIMRPRSMARYLSGSVKEILGTAQSVGCTVEGRAPHDILDYFNS 565
IKH+GNIT ++++ IA+ MR RS+AR LSG++KEILGTAQSVGC V+GR PHDI+D NS
Sbjct: 98 IKHSGNITFDEIVNIARQMRHRSLARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINS 157
Query: 566 GAL 574
GA+
Sbjct: 158 GAV 160
>BC105603-1|AAI05604.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 201 bits (490), Expect = 2e-51
Identities = 93/123 (75%), Positives = 110/123 (89%)
Frame = +2
Query: 206 SPKKVGDDIAXATSDWKGLKITVQLIVQNRQAQISVVPSAAALIIRALKEPPRDRKKQKN 385
SPKKVGDDIA AT DWKGL+ITV+L +QNRQAQI VVPSA+ALII+ALKEPPRDRKKQKN
Sbjct: 38 SPKKVGDDIAKATGDWKGLRITVKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKN 97
Query: 386 IKHNGNITMEDVIGIAKIMRPRSMARYLSGSVKEILGTAQSVGCTVEGRAPHDILDYFNS 565
IKH+GNIT ++++ IA+ MR RS+AR LSG++KEILGTAQSVGC V+GR PHDI+D NS
Sbjct: 98 IKHSGNITFDEIVNIARQMRHRSLARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINS 157
Query: 566 GAL 574
GA+
Sbjct: 158 GAV 160
>BC094831-1|AAH94831.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 201 bits (490), Expect = 2e-51
Identities = 93/123 (75%), Positives = 110/123 (89%)
Frame = +2
Query: 206 SPKKVGDDIAXATSDWKGLKITVQLIVQNRQAQISVVPSAAALIIRALKEPPRDRKKQKN 385
SPKKVGDDIA AT DWKGL+ITV+L +QNRQAQI VVPSA+ALII+ALKEPPRDRKKQKN
Sbjct: 38 SPKKVGDDIAKATGDWKGLRITVKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKN 97
Query: 386 IKHNGNITMEDVIGIAKIMRPRSMARYLSGSVKEILGTAQSVGCTVEGRAPHDILDYFNS 565
IKH+GNIT ++++ IA+ MR RS+AR LSG++KEILGTAQSVGC V+GR PHDI+D NS
Sbjct: 98 IKHSGNITFDEIVNIARQMRHRSLARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINS 157
Query: 566 GAL 574
GA+
Sbjct: 158 GAV 160
>BC050644-1|AAH50644.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 201 bits (490), Expect = 2e-51
Identities = 93/123 (75%), Positives = 110/123 (89%)
Frame = +2
Query: 206 SPKKVGDDIAXATSDWKGLKITVQLIVQNRQAQISVVPSAAALIIRALKEPPRDRKKQKN 385
SPKKVGDDIA AT DWKGL+ITV+L +QNRQAQI VVPSA+ALII+ALKEPPRDRKKQKN
Sbjct: 38 SPKKVGDDIAKATGDWKGLRITVKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKN 97
Query: 386 IKHNGNITMEDVIGIAKIMRPRSMARYLSGSVKEILGTAQSVGCTVEGRAPHDILDYFNS 565
IKH+GNIT ++++ IA+ MR RS+AR LSG++KEILGTAQSVGC V+GR PHDI+D NS
Sbjct: 98 IKHSGNITFDEIVNIARQMRHRSLARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINS 157
Query: 566 GAL 574
GA+
Sbjct: 158 GAV 160
>AL445222-15|CAH72929.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 201 bits (490), Expect = 2e-51
Identities = 93/123 (75%), Positives = 110/123 (89%)
Frame = +2
Query: 206 SPKKVGDDIAXATSDWKGLKITVQLIVQNRQAQISVVPSAAALIIRALKEPPRDRKKQKN 385
SPKKVGDDIA AT DWKGL+ITV+L +QNRQAQI VVPSA+ALII+ALKEPPRDRKKQKN
Sbjct: 38 SPKKVGDDIAKATGDWKGLRITVKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKN 97
Query: 386 IKHNGNITMEDVIGIAKIMRPRSMARYLSGSVKEILGTAQSVGCTVEGRAPHDILDYFNS 565
IKH+GNIT ++++ IA+ MR RS+AR LSG++KEILGTAQSVGC V+GR PHDI+D NS
Sbjct: 98 IKHSGNITFDEIVNIARQMRHRSLARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINS 157
Query: 566 GAL 574
GA+
Sbjct: 158 GAV 160
>AB209471-1|BAD92708.1| 197|Homo sapiens ribosomal protein L12
variant protein.
Length = 197
Score = 199 bits (486), Expect = 5e-51
Identities = 92/123 (74%), Positives = 109/123 (88%)
Frame = +2
Query: 206 SPKKVGDDIAXATSDWKGLKITVQLIVQNRQAQISVVPSAAALIIRALKEPPRDRKKQKN 385
SPKKVGDDIA AT DWKGL+ITV+L +QNRQAQI VVPSA+ALII+ALKEPPRDRKKQKN
Sbjct: 70 SPKKVGDDIAKATGDWKGLRITVKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKN 129
Query: 386 IKHNGNITMEDVIGIAKIMRPRSMARYLSGSVKEILGTAQSVGCTVEGRAPHDILDYFNS 565
IKH+GNIT ++++ I + MR RS+AR LSG++KEILGTAQSVGC V+GR PHDI+D NS
Sbjct: 130 IKHSGNITFDEIVNIVRQMRHRSLARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINS 189
Query: 566 GAL 574
GA+
Sbjct: 190 GAV 192
>AL021366-3|CAA16156.1| 165|Homo sapiens cICK0721Q.2 (60S Ribosomal
Protein L12 LIKE protein) protein.
Length = 165
Score = 191 bits (466), Expect = 1e-48
Identities = 88/123 (71%), Positives = 107/123 (86%)
Frame = +2
Query: 206 SPKKVGDDIAXATSDWKGLKITVQLIVQNRQAQISVVPSAAALIIRALKEPPRDRKKQKN 385
SPKKVGDDIA AT DWKGL+ITV+L ++NRQAQI VVPSA+A II+ALK+PPRDRKKQKN
Sbjct: 38 SPKKVGDDIAKATGDWKGLRITVKLTIENRQAQIEVVPSASAPIIKALKKPPRDRKKQKN 97
Query: 386 IKHNGNITMEDVIGIAKIMRPRSMARYLSGSVKEILGTAQSVGCTVEGRAPHDILDYFNS 565
IKHNGNIT ++++ IA+ MR RS+AR LSG++KEI GTAQS+GC V+G PHDI+D NS
Sbjct: 98 IKHNGNITFDEIVNIARQMRHRSLARELSGTIKEIPGTAQSMGCNVDGHHPHDIIDDINS 157
Query: 566 GAL 574
GA+
Sbjct: 158 GAV 160
>BC059950-1|AAH59950.1| 132|Homo sapiens RPL12 protein protein.
Length = 132
Score = 143 bits (347), Expect = 3e-34
Identities = 66/90 (73%), Positives = 80/90 (88%)
Frame = +2
Query: 305 ISVVPSAAALIIRALKEPPRDRKKQKNIKHNGNITMEDVIGIAKIMRPRSMARYLSGSVK 484
I VVPSA+ALII+ALKEPPRDRKKQKNIKH+GNIT ++++ IA+ MR RS+AR LSG++K
Sbjct: 38 IEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRSLARELSGTIK 97
Query: 485 EILGTAQSVGCTVEGRAPHDILDYFNSGAL 574
EILGTAQSVGC V+GR PHDI+D NSGA+
Sbjct: 98 EILGTAQSVGCNVDGRHPHDIIDDINSGAV 127
>AB041941-1|BAD83595.1| 915|Homo sapiens G-protein coupled receptor
protein.
Length = 915
Score = 33.9 bits (74), Expect = 0.41
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = +2
Query: 248 DWKGLKITVQLIVQNRQAQISVVPSAAALIIR--ALKEPPRDRKKQ-KNIKHNGNITMED 418
DWKG+ +T Q QI ++ A+L IR L EP + RK K I ++T D
Sbjct: 435 DWKGIPVTQVQSTQGYNYQIEMIQQNASLPIRGHVLIEPDQFRKSHPKTIISMASLTFGD 494
Query: 419 VIGIAK 436
++ I +
Sbjct: 495 ILPITQ 500
>BX088650-2|CAM26293.1| 203|Homo sapiens kinesin family member C1
protein.
Length = 203
Score = 29.5 bits (63), Expect = 8.9
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -1
Query: 257 PSSH*WLXRCHHQPFLGT 204
PSSH +CHHQPFL T
Sbjct: 85 PSSHPLPWQCHHQPFLET 102
>AL662799-3|CAM25565.1| 203|Homo sapiens kinesin family member C1
protein.
Length = 203
Score = 29.5 bits (63), Expect = 8.9
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -1
Query: 257 PSSH*WLXRCHHQPFLGT 204
PSSH +CHHQPFL T
Sbjct: 85 PSSHPLPWQCHHQPFLET 102
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,206,901
Number of Sequences: 237096
Number of extensions: 1907797
Number of successful extensions: 8822
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 8550
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8822
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5929224630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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