Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_A02
         (295 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U64841-2|AAB04846.2|  337|Caenorhabditis elegans Serpentine rece...    26   5.4  
Z78410-4|CAB01643.1|  272|Caenorhabditis elegans Hypothetical pr...    25   7.1  
AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density l...    25   7.1  
Z79756-9|CAK12562.1|  830|Caenorhabditis elegans Hypothetical pr...    25   9.4  
Z79756-8|CAB02122.1|  891|Caenorhabditis elegans Hypothetical pr...    25   9.4  
Z79756-7|CAK12561.1|  855|Caenorhabditis elegans Hypothetical pr...    25   9.4  
U56963-1|AAB38120.1|  161|Caenorhabditis elegans Hypothetical pr...    25   9.4  
U28991-10|AAK68306.2|  487|Caenorhabditis elegans Hypothetical p...    25   9.4  
U28991-9|AAU05576.1|  484|Caenorhabditis elegans Hypothetical pr...    25   9.4  

>U64841-2|AAB04846.2|  337|Caenorhabditis elegans Serpentine
           receptor, class t protein14 protein.
          Length = 337

 Score = 25.8 bits (54), Expect = 5.4
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +3

Query: 165 IQFVFILTFMYYNWFTNNVDFLNKYN 242
           ++F+ +   +Y  +FTN V F  KYN
Sbjct: 135 VKFIVLALSIYVTFFTNPVLFTAKYN 160


>Z78410-4|CAB01643.1|  272|Caenorhabditis elegans Hypothetical
           protein C51E3.8 protein.
          Length = 272

 Score = 25.4 bits (53), Expect = 7.1
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +2

Query: 146 LKEKT*HPICFHTYFYVLQLV 208
           LK+KT +   FHTYF V+  V
Sbjct: 249 LKKKTNNSSAFHTYFIVIMSV 269


>AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density
            lipoprotein receptorrelated protein 2 protein.
          Length = 2192

 Score = 25.4 bits (53), Expect = 7.1
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -1

Query: 112  LCICLRTYSGGSLACLRCEGTCG 44
            +C C   Y+  S A   CEG CG
Sbjct: 1700 VCHCPSNYTQSSCATNVCEGVCG 1722


>Z79756-9|CAK12562.1|  830|Caenorhabditis elegans Hypothetical
           protein F53C11.5c protein.
          Length = 830

 Score = 25.0 bits (52), Expect = 9.4
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +1

Query: 1   PELGSLSWPPMKPNDRKYLRIG 66
           P+L +L+ PP KP  ++ + IG
Sbjct: 591 PQLSNLNRPPFKPGTQRGIMIG 612


>Z79756-8|CAB02122.1|  891|Caenorhabditis elegans Hypothetical
           protein F53C11.5b protein.
          Length = 891

 Score = 25.0 bits (52), Expect = 9.4
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +1

Query: 1   PELGSLSWPPMKPNDRKYLRIG 66
           P+L +L+ PP KP  ++ + IG
Sbjct: 652 PQLSNLNRPPFKPGTQRGIMIG 673


>Z79756-7|CAK12561.1|  855|Caenorhabditis elegans Hypothetical
           protein F53C11.5a protein.
          Length = 855

 Score = 25.0 bits (52), Expect = 9.4
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +1

Query: 1   PELGSLSWPPMKPNDRKYLRIG 66
           P+L +L+ PP KP  ++ + IG
Sbjct: 616 PQLSNLNRPPFKPGTQRGIMIG 637


>U56963-1|AAB38120.1|  161|Caenorhabditis elegans Hypothetical
           protein T13A10.2 protein.
          Length = 161

 Score = 25.0 bits (52), Expect = 9.4
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -1

Query: 118 PRLCICLRTYSGGSLACLR 62
           P++C CL TY G   AC+R
Sbjct: 112 PKVCSCLHTYCG---ACIR 127


>U28991-10|AAK68306.2|  487|Caenorhabditis elegans Hypothetical
           protein F08F8.10a protein.
          Length = 487

 Score = 25.0 bits (52), Expect = 9.4
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +1

Query: 43  DRKYLRIGDKLTIHQNMYEDRY 108
           DR+Y  IG +  + QN Y  +Y
Sbjct: 350 DREYFEIGRRSQLEQNSYASQY 371


>U28991-9|AAU05576.1|  484|Caenorhabditis elegans Hypothetical
           protein F08F8.10b protein.
          Length = 484

 Score = 25.0 bits (52), Expect = 9.4
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +1

Query: 43  DRKYLRIGDKLTIHQNMYEDRY 108
           DR+Y  IG +  + QN Y  +Y
Sbjct: 347 DREYFEIGRRSQLEQNSYASQY 368


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,852,991
Number of Sequences: 27780
Number of extensions: 103633
Number of successful extensions: 300
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 299
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 300
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 291481146
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)