Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_P21
         (471 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83317-2|CAB05899.1|  470|Caenorhabditis elegans Hypothetical pr...    28   2.9  
Z83317-1|CAB05898.1|  510|Caenorhabditis elegans Hypothetical pr...    28   2.9  
AC024798-1|AAK29914.3|  722|Caenorhabditis elegans Hypothetical ...    28   3.9  
Z81513-13|CAB04180.2| 1213|Caenorhabditis elegans Hypothetical p...    27   6.8  

>Z83317-2|CAB05899.1|  470|Caenorhabditis elegans Hypothetical
           protein F13G11.1b protein.
          Length = 470

 Score = 28.3 bits (60), Expect = 2.9
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -2

Query: 266 NHSASCCLVCCNLKQCSSNNKRQIQA 189
           NHS  C  + CN K C   N +++++
Sbjct: 59  NHSPQCPYILCNCKSCEKLNYKRLKS 84


>Z83317-1|CAB05898.1|  510|Caenorhabditis elegans Hypothetical
           protein F13G11.1a protein.
          Length = 510

 Score = 28.3 bits (60), Expect = 2.9
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -2

Query: 266 NHSASCCLVCCNLKQCSSNNKRQIQA 189
           NHS  C  + CN K C   N +++++
Sbjct: 99  NHSPQCPYILCNCKSCEKLNYKRLKS 124


>AC024798-1|AAK29914.3|  722|Caenorhabditis elegans Hypothetical
           protein Y48G9A.10 protein.
          Length = 722

 Score = 27.9 bits (59), Expect = 3.9
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = -2

Query: 290 SKILTLAPNHSASCCLVCCNLKQCSSNNKRQ 198
           S+  T+ P  SASC LVC  L + SS   R+
Sbjct: 556 SRTETVRPVTSASCKLVCAMLDETSSKQTRR 586


>Z81513-13|CAB04180.2| 1213|Caenorhabditis elegans Hypothetical
           protein F26D2.10 protein.
          Length = 1213

 Score = 27.1 bits (57), Expect = 6.8
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = -1

Query: 141 SNLVLIVNSFNNL*RVTNNIHILRSAIRN 55
           +NL LI   F  L RVTN I++   AI+N
Sbjct: 27  ANLQLISEKFRILSRVTNAIYLQAGAIKN 55


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,906,522
Number of Sequences: 27780
Number of extensions: 154995
Number of successful extensions: 371
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 361
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 371
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 850313440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)