Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_P18
         (568 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48334-1|CAA88308.1|  214|Caenorhabditis elegans Hypothetical pr...   164   3e-41
AF016419-9|AAG24054.1| 2025|Caenorhabditis elegans Hypothetical ...    30   1.3  
AL021474-2|CAA16309.3|  655|Caenorhabditis elegans Hypothetical ...    28   4.1  
Z81543-5|CAB04427.2|  507|Caenorhabditis elegans Hypothetical pr...    27   9.4  
Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical pr...    27   9.4  
Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical pr...    27   9.4  
Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical pr...    27   9.4  
Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical pr...    27   9.4  
AL117207-15|CAB60407.2|  476|Caenorhabditis elegans Hypothetical...    27   9.4  
AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin pr...    27   9.4  
AB049441-1|BAB15803.1|  450|Caenorhabditis elegans CeCHK2 protein.     27   9.4  
AB041996-1|BAB20578.1|  476|Caenorhabditis elegans Ce-CDS-1 prot...    27   9.4  

>Z48334-1|CAA88308.1|  214|Caenorhabditis elegans Hypothetical
           protein F10B5.1 protein.
          Length = 214

 Score =  164 bits (399), Expect = 3e-41
 Identities = 74/93 (79%), Positives = 80/93 (86%)
 Frame = +1

Query: 208 FVRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEAGRICCNKYLVKNCG 387
           F RGVPD KIRIFDLG KRA VD FP CVH++S+E E LSSEALEA RIC NKY+VKNCG
Sbjct: 22  FCRGVPDAKIRIFDLGNKRANVDTFPACVHMMSNEREHLSSEALEAARICANKYMVKNCG 81

Query: 388 KDQFHIRMRLHPFHVIRINKMLSCAGADRLQTG 486
           KD FH+R+R HPFHV RINKMLSCAGADRLQTG
Sbjct: 82  KDGFHLRVRKHPFHVTRINKMLSCAGADRLQTG 114



 Score = 63.3 bits (147), Expect = 1e-10
 Identities = 28/42 (66%), Positives = 30/42 (71%)
 Frame = +3

Query: 144 MGRRPARCYRYCKNKPYPKSRFCPGCA*PKDPYFRLGQKESD 269
           MGRRPARCYRY KNKPYPKSRFC G    K   F LG K ++
Sbjct: 1   MGRRPARCYRYIKNKPYPKSRFCRGVPDAKIRIFDLGNKRAN 42



 Score = 27.5 bits (58), Expect = 7.1
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = +3

Query: 504 GKPKGTVARVRIGQPIMSVR 563
           GKP+G VARV IG  + S+R
Sbjct: 120 GKPQGLVARVDIGDILFSMR 139


>AF016419-9|AAG24054.1| 2025|Caenorhabditis elegans Hypothetical
           protein F07G11.9 protein.
          Length = 2025

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 18/70 (25%), Positives = 31/70 (44%)
 Frame = +1

Query: 358 CNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGDAWCVRENPRAQ*RVCV 537
           CN+Y     G   F+I +  +  ++  + K   C     L+ GD  CV +N   Q R+ V
Sbjct: 707 CNEYATITPGNTCFNISVA-YGINLTDLQKTYDCKA---LEVGDTICVSQNYTCQHRIEV 762

Query: 538 LDSPLCLYAQ 567
           +    C + +
Sbjct: 763 IKGDTCWFLE 772


>AL021474-2|CAA16309.3|  655|Caenorhabditis elegans Hypothetical
           protein Y32F6A.3 protein.
          Length = 655

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 5/37 (13%)
 Frame = +2

Query: 332 RRWKQAVSVATSTS-----*RTAVKISSTSG*DYTPS 427
           RRWK+ V +AT+TS      R+ V+ +STS    TP+
Sbjct: 504 RRWKKVVPIATNTSVSSSTPRSVVRTTSTSSVPTTPT 540


>Z81543-5|CAB04427.2|  507|Caenorhabditis elegans Hypothetical
           protein F49B2.5 protein.
          Length = 507

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = -2

Query: 504 PNAPRIPSLEPISSSARQHFID 439
           P+ PRIPS+ PI++S+  + ID
Sbjct: 30  PSHPRIPSIGPIAASSSGNTID 51


>Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical
           protein F15G9.4b protein.
          Length = 5198

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +1

Query: 211 VRGVPDPKIRIFDLGKKRATVDDF 282
           +RG P PKIR F  GK     DD+
Sbjct: 726 IRGKPHPKIRWFKNGKDLIKPDDY 749


>Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical
           protein F15G9.4a protein.
          Length = 5175

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +1

Query: 211 VRGVPDPKIRIFDLGKKRATVDDF 282
           +RG P PKIR F  GK     DD+
Sbjct: 726 IRGKPHPKIRWFKNGKDLIKPDDY 749


>Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical
           protein F15G9.4b protein.
          Length = 5198

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +1

Query: 211 VRGVPDPKIRIFDLGKKRATVDDF 282
           +RG P PKIR F  GK     DD+
Sbjct: 726 IRGKPHPKIRWFKNGKDLIKPDDY 749


>Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical
           protein F15G9.4a protein.
          Length = 5175

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +1

Query: 211 VRGVPDPKIRIFDLGKKRATVDDF 282
           +RG P PKIR F  GK     DD+
Sbjct: 726 IRGKPHPKIRWFKNGKDLIKPDDY 749


>AL117207-15|CAB60407.2|  476|Caenorhabditis elegans Hypothetical
           protein Y60A3A.12 protein.
          Length = 476

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +3

Query: 75  LCYS*KNDQCILLRLYFGLFQNTMGRRPARCYRYCKNKP 191
           LC S K ++CIL    FG+ +N++ R   RC     N P
Sbjct: 308 LC-SDKAERCILKLTDFGMAKNSVNRMKTRCGTPSYNAP 345


>AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin
           precursor protein.
          Length = 5198

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +1

Query: 211 VRGVPDPKIRIFDLGKKRATVDDF 282
           +RG P PKIR F  GK     DD+
Sbjct: 726 IRGKPHPKIRWFKNGKDLIKPDDY 749


>AB049441-1|BAB15803.1|  450|Caenorhabditis elegans CeCHK2 protein.
          Length = 450

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +3

Query: 75  LCYS*KNDQCILLRLYFGLFQNTMGRRPARCYRYCKNKP 191
           LC S K ++CIL    FG+ +N++ R   RC     N P
Sbjct: 282 LC-SDKAERCILKLTDFGMAKNSVNRMKTRCGTPSYNAP 319


>AB041996-1|BAB20578.1|  476|Caenorhabditis elegans Ce-CDS-1
           protein.
          Length = 476

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +3

Query: 75  LCYS*KNDQCILLRLYFGLFQNTMGRRPARCYRYCKNKP 191
           LC S K ++CIL    FG+ +N++ R   RC     N P
Sbjct: 308 LC-SDKAERCILKLTDFGMAKNSVNRMKTRCGTPSYNAP 345


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,366,702
Number of Sequences: 27780
Number of extensions: 316075
Number of successful extensions: 803
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 771
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 803
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1176726318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)