Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_P18
         (568 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M29488-1|AAA27723.1|   86|Apis mellifera protein ( Bee homeobox-...    24   1.2  
AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.          23   1.6  
M29493-1|AAA27728.1|   74|Apis mellifera protein ( Bee homeobox-...    22   4.9  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    21   6.5  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   6.5  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    21   6.5  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   8.6  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   8.6  

>M29488-1|AAA27723.1|   86|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone H55. ).
          Length = 86

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 8/29 (27%), Positives = 14/29 (48%)
 Frame = +2

Query: 200 ISVLSGVCLTQRSVFSTWAKRERQWMTSH 286
           I +   +CLT+R +   +  R  +W   H
Sbjct: 39  IEIAHALCLTERQIKIWFQNRRMKWKKEH 67


>AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.
          Length = 148

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = -1

Query: 346 LLPAPQNSAARTHQTLSARIVGSHPLSLSFCPSRKYGSLG 227
           L+  P  + +  H  + A  V  + LSLS  P   +GS G
Sbjct: 2   LVARPMQALSIRHAVILASFVWIYALSLSLPPLFGWGSYG 41


>M29493-1|AAA27728.1|   74|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone H90. ).
          Length = 74

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 8/33 (24%), Positives = 15/33 (45%)
 Frame = +2

Query: 200 ISVLSGVCLTQRSVFSTWAKRERQWMTSHYACT 298
           I +   +CLT+R +   +  R  +W   +   T
Sbjct: 39  IEIAHALCLTERQIKIWFQNRRMKWKKENARAT 71


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 515 LGFSRTHHASPVWSLSA 465
           +G S TH AS +W + A
Sbjct: 338 VGASATHGASGIWGIIA 354


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 9/35 (25%), Positives = 17/35 (48%)
 Frame = +2

Query: 50  IGINVSLLFVLFIKKRSVYITKIIFWFISEHNGAP 154
           I +   + +      R V++T ++ W IS   G+P
Sbjct: 286 IAVTQPIKYAKHKNNRRVWLTILLVWAISAAIGSP 320


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 7/25 (28%), Positives = 13/25 (52%)
 Frame = +2

Query: 200 ISVLSGVCLTQRSVFSTWAKRERQW 274
           I +   +CLT+R +   +  R  +W
Sbjct: 301 IEIAHALCLTERQIKIWFQNRRMKW 325


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +1

Query: 442 NKMLSCAGADRLQTGDAWCVRENPRAQ*R 528
           + +LS        +GD  CV  NP A+ R
Sbjct: 671 SSLLSITNLAAEHSGDYTCVAANPAAEVR 699



 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +2

Query: 5    LCGGAYQVFLYKSLVIGINVS 67
            LCG  YQ++L     IG + S
Sbjct: 1466 LCGNTYQLYLTSHNKIGSSPS 1486


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +2

Query: 5    LCGGAYQVFLYKSLVIGINVS 67
            LCG  YQ++L     IG + S
Sbjct: 1462 LCGNTYQLYLTSHNKIGSSPS 1482


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,729
Number of Sequences: 438
Number of extensions: 4325
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16440594
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)