Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0005_P17
(613 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 48 7e-08
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 48 1e-07
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 48 1e-07
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 41 1e-05
AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein. 27 0.14
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 25 0.77
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 21 7.2
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 48.0 bits (109), Expect = 7e-08
Identities = 31/127 (24%), Positives = 53/127 (41%), Gaps = 3/127 (2%)
Frame = +2
Query: 197 GDVTMIYCMYGSNPLAHPNYFKNGKDVNGNPEDRITRHNRTSG---KRLLFKTTLPEDEG 367
G + C+ NP + +GK ++ ++ ++ +G L +T D G
Sbjct: 408 GPSMFLKCVASGNPTPEITWELDGKRLSNTERLQVGQYVTVNGDVVSHLNISSTHTNDGG 467
Query: 368 EYTCEVDNGVGKPQKHSLKLTVVSAPKYEQKPEKVIVVKHGQDVTIPCKVTGLPAPKVVW 547
Y C + VG + HS +L V P +K IV G+ + + C V G P +VW
Sbjct: 468 LYKCIAASKVGSAE-HSARLNVYGLPFIRHMDKKAIVA--GETLRVTCPVAGYPIESIVW 524
Query: 548 SHNAKPL 568
+ + L
Sbjct: 525 ERDTRVL 531
Score = 46.8 bits (106), Expect = 2e-07
Identities = 25/81 (30%), Positives = 33/81 (40%)
Frame = +2
Query: 332 LLFKTTLPEDEGEYTCEVDNGVGKPQKHSLKLTVVSAPKYEQKPEKVIVVKHGQDVTIPC 511
L+ GEY C +N G HS LTV P++ +P + G D + C
Sbjct: 643 LMISVITARHAGEYVCTAENAAGTAS-HSTTLTVNVPPRWILEPTDKAFAQ-GSDARVEC 700
Query: 512 KVTGLPAPKVVWSHNAKPLSG 574
K G P P+V W A G
Sbjct: 701 KADGFPKPQVTWKKAAGDTPG 721
Score = 44.4 bits (100), Expect = 9e-07
Identities = 29/88 (32%), Positives = 41/88 (46%)
Frame = +2
Query: 305 RHNRTSGKRLLFKTTLPEDEGEYTCEVDNGVGKPQKHSLKLTVVSAPKYEQKPEKVIVVK 484
R + SG L+ + ED G+Y C V+N VG ++ LTV + E +P +
Sbjct: 264 RVRQVSGT-LIIREARVEDSGKYLCIVNNSVGGESVETV-LTVTAPLGAEIEPSTQ-TID 320
Query: 485 HGQDVTIPCKVTGLPAPKVVWSHNAKPL 568
G+ T C V G P V W + KPL
Sbjct: 321 FGRPATFTCNVRGNPIKTVSWLKDGKPL 348
Score = 38.7 bits (86), Expect = 4e-05
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = +2
Query: 359 DEGEYTCEVDNGVGKPQKHSLKLTVVSAPKYEQKPEKVIVVKHGQDVTIPCKVTGLPAPK 538
+EG Y CE NG+G + ++V + P +E K K + G+ + C+ G
Sbjct: 749 NEGYYLCEAVNGIGAGLSAVIFISVQAPPHFEIK-LKNQTARRGEPAVLQCEAQGEKPIG 807
Query: 539 VVWSHNAK---PLSGCRATVSD 595
++W+ N K P S R T+ +
Sbjct: 808 ILWNMNNKRLDPKSDSRYTIRE 829
Score = 33.5 bits (73), Expect = 0.002
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Frame = +2
Query: 332 LLFKTTLPEDEGEYTCEVDNGVGKPQKHS-LKLTVVSAPKYEQKPEKVIVVKHGQDVTIP 508
L ++ ED+G Y C V N Q + LKL P ++ ++ G + +
Sbjct: 355 LRIESVKKEDKGMYQCFVRNDQESAQATAELKLGGRFEPPQIRQAFAEETLQPGPSMFLK 414
Query: 509 CKVTGLPAPKVVWSHNAKPLS 571
C +G P P++ W + K LS
Sbjct: 415 CVASGNPTPEITWELDGKRLS 435
Score = 32.7 bits (71), Expect = 0.003
Identities = 16/58 (27%), Positives = 24/58 (41%)
Frame = +2
Query: 374 TCEVDNGVGKPQKHSLKLTVVSAPKYEQKPEKVIVVKHGQDVTIPCKVTGLPAPKVVW 547
T + G G+ K V P + + +DV +PC G+PAP+V W
Sbjct: 1253 TASTNIGEGEASKIVALAPSVRVPAKIASFDDKFTATYKEDVKLPCLAVGVPAPEVTW 1310
Score = 27.5 bits (58), Expect = 0.11
Identities = 8/35 (22%), Positives = 17/35 (48%)
Frame = +2
Query: 443 PKYEQKPEKVIVVKHGQDVTIPCKVTGLPAPKVVW 547
P + ++P + +G + C+ G P P ++W
Sbjct: 3 PVFVKEPPNRVDFSNGTGAVVECQARGNPQPDIIW 37
Score = 23.0 bits (47), Expect = 2.4
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +2
Query: 332 LLFKTTLPEDEGEYTCEVDNGVG 400
L K D GEY+C V+N G
Sbjct: 1331 LFIKEVDRTDAGEYSCYVENTFG 1353
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 47.6 bits (108), Expect = 1e-07
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Frame = +2
Query: 320 SGKRLLFKTTLPEDEGEYTCEVDNGVGKPQKHSLKLTVVSAPKYEQKPEKVIVVKHGQDV 499
S LL + + EG Y C+ NG+G ++L V S+P Y P +++ VK G
Sbjct: 767 SNGTLLLQHVKEDREGFYLCQASNGIGSGIGKVVQLKVNSSP-YFAAPSRLVTVKKGDTA 825
Query: 500 TIPCKVTGLPAPKVVWSHNAK----PLSGCRATV 589
T+ C+V G V W K P + R TV
Sbjct: 826 TLHCEVHGDTPVTVTWLKGGKIELNPSTNYRVTV 859
Score = 42.7 bits (96), Expect = 3e-06
Identities = 30/127 (23%), Positives = 49/127 (38%), Gaps = 3/127 (2%)
Frame = +2
Query: 197 GDVTMIYCMYGSNPLAHPNYFKNGKDVNGNPEDRITRHNRTSG---KRLLFKTTLPEDEG 367
G + C NP + +G + N I ++ G + + ED G
Sbjct: 436 GPAVSLKCSAAGNPTPQVTWALDGFALPTNGRFMIGQYVTVHGDVISHVNISHVMVEDGG 495
Query: 368 EYTCEVDNGVGKPQKHSLKLTVVSAPKYEQKPEKVIVVKHGQDVTIPCKVTGLPAPKVVW 547
EY+C +N GK H+ +L V P P+ V G+ + + C V G P ++ W
Sbjct: 496 EYSCMAENRAGKVT-HAARLNVYGLPYIRLIPKVTAVA--GETLRLKCPVAGYPIEEIKW 552
Query: 548 SHNAKPL 568
+ L
Sbjct: 553 ERANREL 559
Score = 42.3 bits (95), Expect = 4e-06
Identities = 41/175 (23%), Positives = 71/175 (40%), Gaps = 3/175 (1%)
Frame = +2
Query: 59 SLLNRRRHLGVR-GSVTQLTGDVLK--FFLEGPASSSRTRLSKDMMAKAGDVTMIYCMYG 229
S N++ H R G V + +++ F EG + RTR + A +T+ + G
Sbjct: 590 SARNKQGHSARRSGDVAVIVPPIIEPFTFQEGLSEGMRTRTVCGVAAGDPPLTISWLKDG 649
Query: 230 SNPLAHPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEGEYTCEVDNGVGKPQ 409
+P P + +P + L E G+YTC N +
Sbjct: 650 QSPFPLPPNLASANISQLDPYSSL----------LSITNLAAEHSGDYTCVAANPAAEV- 698
Query: 410 KHSLKLTVVSAPKYEQKPEKVIVVKHGQDVTIPCKVTGLPAPKVVWSHNAKPLSG 574
+++ KL V P++ +P V V ++ + V + C+ G+P P +VW SG
Sbjct: 699 RYTAKLQVKVPPRWIVEPTDVSVERN-KHVALHCQAQGVPTPTIVWKKATGSKSG 752
Score = 35.1 bits (77), Expect = 5e-04
Identities = 19/65 (29%), Positives = 29/65 (44%)
Frame = +2
Query: 356 EDEGEYTCEVDNGVGKPQKHSLKLTVVSAPKYEQKPEKVIVVKHGQDVTIPCKVTGLPAP 535
ED G Y C V G + S +L + +AP ++ G V++ C G P P
Sbjct: 392 EDRGMYQCIVRRSEGDTAQASAELQLGNAPPMLLYSFIEQTLQPGPAVSLKCSAAGNPTP 451
Query: 536 KVVWS 550
+V W+
Sbjct: 452 QVTWA 456
Score = 33.1 bits (72), Expect = 0.002
Identities = 29/115 (25%), Positives = 51/115 (44%), Gaps = 6/115 (5%)
Frame = +2
Query: 173 SKDMMAKAGDVTMIYC-MYGSNPLAHPNYFKNGK-DVNGNPEDRIT--RHNRTSG--KRL 334
S+ + K GD ++C ++G P+ + K GK ++N + R+T R G +L
Sbjct: 814 SRLVTVKKGDTATLHCEVHGDTPVT-VTWLKGGKIELNPSTNYRVTVKREVTPDGVIAQL 872
Query: 335 LFKTTLPEDEGEYTCEVDNGVGKPQKHSLKLTVVSAPKYEQKPEKVIVVKHGQDV 499
+ D G Y C+ N G+ Q+ ++L V P+ E +V +V
Sbjct: 873 QISSAEASDSGAYFCQASNLYGRDQQ-LVQLLVQEPPQPPNSLETAMVASRSINV 926
Score = 29.9 bits (64), Expect = 0.021
Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 3/90 (3%)
Frame = +2
Query: 314 RTSGKRLLFKTTLPEDEGEYTCEVDNGVGKPQKHSLKLTVVSAPKYEQKPEKVIVVKHGQ 493
R G L + ED G Y C N G+ ++L +V+AP + + ++ V G
Sbjct: 289 RLLGSVLALEAVTLEDNGIYRCSASNPGGEASA-EIRL-IVTAPLHVEVTPPLLSVHLGG 346
Query: 494 DVTIPCKVTGLP--APK-VVWSHNAKPLSG 574
+ C+V+ P P + W + + L G
Sbjct: 347 NAEFRCEVSTHPQAGPHFITWYKDGRQLPG 376
Score = 29.5 bits (63), Expect = 0.027
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +2
Query: 332 LLFKTTLPEDEGEYTCEVDNGVGKPQKHSLKLTVVSAP 445
L+ +D G+YTC+V+N G + H LTV P
Sbjct: 1369 LMLSNLQSQDGGDYTCQVENAQGNDKLH-YTLTVQVPP 1405
Score = 25.0 bits (52), Expect = 0.58
Identities = 32/147 (21%), Positives = 48/147 (32%), Gaps = 2/147 (1%)
Frame = +2
Query: 83 LGVRGSVTQLTGDVLKFFLEGPASSSRTRLSKDMMAKAGDVTMIYCMYGSNPLAHPNYFK 262
+G +VT G L GP+ S+ + + + GS PL
Sbjct: 9 VGAAAAVTSAGGHGFDAHLRGPSFVMEPP-SRVEFSNSSGAWLDCTATGSPPLNIDWSTA 67
Query: 263 NGKDVNGNPEDRITRHNRTSGKRLLFKTTLPED--EGEYTCEVDNGVGKPQKHSLKLTVV 436
+G VN P R N T +D Y C N VG+ +++ V
Sbjct: 68 DGHPVNDVPGVRRVLRNGTLVLLPFPAAAFRQDVHSAAYRCVASNSVGRVLSRDVQVRAV 127
Query: 437 SAPKYEQKPEKVIVVKHGQDVTIPCKV 517
A Y+ E + G + C V
Sbjct: 128 VAQAYKVDVEVIGGASRGCTAVLRCVV 154
Score = 21.0 bits (42), Expect = 9.5
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -2
Query: 570 LRGFALWLQTTLGAGRPVTLHGIVTS 493
L GFAL G+ VT+HG V S
Sbjct: 457 LDGFALPTNGRFMIGQYVTVHGDVIS 482
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 47.6 bits (108), Expect = 1e-07
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Frame = +2
Query: 320 SGKRLLFKTTLPEDEGEYTCEVDNGVGKPQKHSLKLTVVSAPKYEQKPEKVIVVKHGQDV 499
S LL + + EG Y C+ NG+G ++L V S+P Y P +++ VK G
Sbjct: 763 SNGTLLLQHVKEDREGFYLCQASNGIGSGIGKVVQLKVNSSP-YFAAPSRLVTVKKGDTA 821
Query: 500 TIPCKVTGLPAPKVVWSHNAK----PLSGCRATV 589
T+ C+V G V W K P + R TV
Sbjct: 822 TLHCEVHGDTPVTVTWLKGGKIELNPSTNYRVTV 855
Score = 44.8 bits (101), Expect = 7e-07
Identities = 31/128 (24%), Positives = 61/128 (47%), Gaps = 2/128 (1%)
Frame = +2
Query: 197 GDVTMIYCMY--GSNPLAHPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEGE 370
G+ T + C G PL+ ++ K+G+ + + +T ++ + L+ + P+ G
Sbjct: 625 GERTTLTCSVTRGDLPLSI-SWLKDGRAMGPSERVHVTNMDQYNSI-LMIEHLSPDHNGN 682
Query: 371 YTCEVDNGVGKPQKHSLKLTVVSAPKYEQKPEKVIVVKHGQDVTIPCKVTGLPAPKVVWS 550
Y+C N + H+ +L V P++ +P V V ++ + V + C+ G+P P +VW
Sbjct: 683 YSCVARN-LAAEVSHTQRLVVHVPPRWIVEPTDVSVERN-KHVALHCQAQGVPTPTIVWK 740
Query: 551 HNAKPLSG 574
SG
Sbjct: 741 KATGSKSG 748
Score = 42.7 bits (96), Expect = 3e-06
Identities = 30/127 (23%), Positives = 49/127 (38%), Gaps = 3/127 (2%)
Frame = +2
Query: 197 GDVTMIYCMYGSNPLAHPNYFKNGKDVNGNPEDRITRHNRTSG---KRLLFKTTLPEDEG 367
G + C NP + +G + N I ++ G + + ED G
Sbjct: 436 GPAVSLKCSAAGNPTPQVTWALDGFALPTNGRFMIGQYVTVHGDVISHVNISHVMVEDGG 495
Query: 368 EYTCEVDNGVGKPQKHSLKLTVVSAPKYEQKPEKVIVVKHGQDVTIPCKVTGLPAPKVVW 547
EY+C +N GK H+ +L V P P+ V G+ + + C V G P ++ W
Sbjct: 496 EYSCMAENRAGKVT-HAARLNVYGLPYIRLIPKVTAVA--GETLRLKCPVAGYPIEEIKW 552
Query: 548 SHNAKPL 568
+ L
Sbjct: 553 ERANREL 559
Score = 35.1 bits (77), Expect = 5e-04
Identities = 19/65 (29%), Positives = 29/65 (44%)
Frame = +2
Query: 356 EDEGEYTCEVDNGVGKPQKHSLKLTVVSAPKYEQKPEKVIVVKHGQDVTIPCKVTGLPAP 535
ED G Y C V G + S +L + +AP ++ G V++ C G P P
Sbjct: 392 EDRGMYQCIVRRSEGDTAQASAELQLGNAPPMLLYSFIEQTLQPGPAVSLKCSAAGNPTP 451
Query: 536 KVVWS 550
+V W+
Sbjct: 452 QVTWA 456
Score = 33.1 bits (72), Expect = 0.002
Identities = 29/115 (25%), Positives = 51/115 (44%), Gaps = 6/115 (5%)
Frame = +2
Query: 173 SKDMMAKAGDVTMIYC-MYGSNPLAHPNYFKNGK-DVNGNPEDRIT--RHNRTSG--KRL 334
S+ + K GD ++C ++G P+ + K GK ++N + R+T R G +L
Sbjct: 810 SRLVTVKKGDTATLHCEVHGDTPVT-VTWLKGGKIELNPSTNYRVTVKREVTPDGVIAQL 868
Query: 335 LFKTTLPEDEGEYTCEVDNGVGKPQKHSLKLTVVSAPKYEQKPEKVIVVKHGQDV 499
+ D G Y C+ N G+ Q+ ++L V P+ E +V +V
Sbjct: 869 QISSAEASDSGAYFCQASNLYGRDQQ-LVQLLVQEPPQPPNSLETAMVASRSINV 922
Score = 29.9 bits (64), Expect = 0.021
Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 3/90 (3%)
Frame = +2
Query: 314 RTSGKRLLFKTTLPEDEGEYTCEVDNGVGKPQKHSLKLTVVSAPKYEQKPEKVIVVKHGQ 493
R G L + ED G Y C N G+ ++L +V+AP + + ++ V G
Sbjct: 289 RLLGSVLALEAVTLEDNGIYRCSASNPGGEASA-EIRL-IVTAPLHVEVTPPLLSVHLGG 346
Query: 494 DVTIPCKVTGLP--APK-VVWSHNAKPLSG 574
+ C+V+ P P + W + + L G
Sbjct: 347 NAEFRCEVSTHPQAGPHFITWYKDGRQLPG 376
Score = 29.5 bits (63), Expect = 0.027
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +2
Query: 332 LLFKTTLPEDEGEYTCEVDNGVGKPQKHSLKLTVVSAP 445
L+ +D G+YTC+V+N G + H LTV P
Sbjct: 1365 LMLSNLQSQDGGDYTCQVENAQGNDKLH-YTLTVQVPP 1401
Score = 25.0 bits (52), Expect = 0.58
Identities = 32/147 (21%), Positives = 48/147 (32%), Gaps = 2/147 (1%)
Frame = +2
Query: 83 LGVRGSVTQLTGDVLKFFLEGPASSSRTRLSKDMMAKAGDVTMIYCMYGSNPLAHPNYFK 262
+G +VT G L GP+ S+ + + + GS PL
Sbjct: 9 VGAAAAVTSAGGHGFDAHLRGPSFVMEPP-SRVEFSNSSGAWLDCTATGSPPLNIDWSTA 67
Query: 263 NGKDVNGNPEDRITRHNRTSGKRLLFKTTLPED--EGEYTCEVDNGVGKPQKHSLKLTVV 436
+G VN P R N T +D Y C N VG+ +++ V
Sbjct: 68 DGHPVNDVPGVRRVLRNGTLVLLPFPAAAFRQDVHSAAYRCVASNSVGRVLSRDVQVRAV 127
Query: 437 SAPKYEQKPEKVIVVKHGQDVTIPCKV 517
A Y+ E + G + C V
Sbjct: 128 VAQAYKVDVEVIGGASRGCTAVLRCVV 154
Score = 21.0 bits (42), Expect = 9.5
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -2
Query: 570 LRGFALWLQTTLGAGRPVTLHGIVTS 493
L GFAL G+ VT+HG V S
Sbjct: 457 LDGFALPTNGRFMIGQYVTVHGDVIS 482
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 40.7 bits (91), Expect = 1e-05
Identities = 36/128 (28%), Positives = 51/128 (39%)
Frame = +2
Query: 188 AKAGDVTMIYCMYGSNPLAHPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEG 367
A+ GD I C P + +NG D+ E I N G L K L G
Sbjct: 322 ARVGDNVEIKCDVTGTPPPPLVWRRNGADLETLNEPEIRVFN--DGSLYLTKVQLIH-AG 378
Query: 368 EYTCEVDNGVGKPQKHSLKLTVVSAPKYEQKPEKVIVVKHGQDVTIPCKVTGLPAPKVVW 547
YTC Q H L T+ + P+ + P + + ++ I C V G P P+V W
Sbjct: 379 NYTCHAVRNQDVVQTHVL--TIHTIPEVKVTP-RFQAKRLKEEANIRCHVAGEPLPRVQW 435
Query: 548 SHNAKPLS 571
N + L+
Sbjct: 436 LKNDEALN 443
Score = 33.1 bits (72), Expect = 0.002
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +2
Query: 422 KLTVVSAPKYEQKPE-KVIVVKHGQDVTIPCKVTGLPAPKVVWSHNAKPL 568
KL VS ++ E I + G +V I C VTG P P +VW N L
Sbjct: 302 KLYSVSVVSLDKSLEVNHISARVGDNVEIKCDVTGTPPPPLVWRRNGADL 351
>AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein.
Length = 122
Score = 27.1 bits (57), Expect = 0.14
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +2
Query: 488 GQDVTIPCKVTGLPAPKVVW 547
G+ +T C TG P P++ W
Sbjct: 37 GRKITFFCMATGFPRPEITW 56
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 24.6 bits (51), Expect = 0.77
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = -2
Query: 324 PEVLLWRVIRSSGFPFTSLPFLK*LG 247
P ++ WR +R+ P PF + LG
Sbjct: 180 PAIVWWRAVRTEEVPEDKCPFTEHLG 205
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 21.4 bits (43), Expect = 7.2
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +2
Query: 494 DVTIPCKVTGLPAPKVVWS 550
DVT+ C L A KVV S
Sbjct: 37 DVTLACNEASLKAHKVVLS 55
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,228
Number of Sequences: 438
Number of extensions: 3965
Number of successful extensions: 38
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18093444
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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