Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_P09
         (345 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    22   2.0  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   2.7  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    21   2.7  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    20   8.2  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    20   8.2  

>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.8 bits (44), Expect = 2.0
 Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
 Frame = -2

Query: 230 DNDVNNFVFQLF--RCGLYS*DDFVQRYLLILDTRPLQLHS 114
           DN+ N F+ Q+F  RC  Y  +D   + ++  D   ++++S
Sbjct: 164 DNNFNVFLRQVFTCRCKDYKNEDLEDQPVVYNDVNGVRINS 204


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.4 bits (43), Expect = 2.7
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = -3

Query: 169 ILFNVTS*YLILDHCSYIVAVL 104
           +LF + S  L+LD+ S +VA++
Sbjct: 283 LLFTLYSSLLLLDYVSCVVALI 304


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.4 bits (43), Expect = 2.7
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = -3

Query: 169 ILFNVTS*YLILDHCSYIVAVL 104
           +LF + S  L+LD+ S +VA++
Sbjct: 209 LLFTLYSSLLLLDYVSCVVALI 230


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 19.8 bits (39), Expect = 8.2
 Identities = 6/22 (27%), Positives = 13/22 (59%)
 Frame = +3

Query: 192 SKKLENKIVDIVVFPGIDIYQW 257
           +KK++  +  +V  P ++  QW
Sbjct: 100 NKKIDRNLQFVVSLPEVERVQW 121



 Score = 19.8 bits (39), Expect = 8.2
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +3

Query: 246  IYQWDEQFRRTNPRAGATVSDTRSPS 323
            I+  DE F+R   + G+T S+  S S
Sbjct: 1387 IFYLDEAFQRRVTQIGSTSSNNPSIS 1412


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 19.8 bits (39), Expect = 8.2
 Identities = 6/22 (27%), Positives = 13/22 (59%)
 Frame = +3

Query: 192 SKKLENKIVDIVVFPGIDIYQW 257
           +KK++  +  +V  P ++  QW
Sbjct: 100 NKKIDRNLQFVVSLPEVERVQW 121



 Score = 19.8 bits (39), Expect = 8.2
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +3

Query: 246  IYQWDEQFRRTNPRAGATVSDTRSPS 323
            I+  DE F+R   + G+T S+  S S
Sbjct: 1387 IFYLDEAFQRRVTQIGSTSSNNPSIS 1412


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,587
Number of Sequences: 336
Number of extensions: 1545
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6770240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)