Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0005_P05
(397 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0619 - 35136435-35136728,35137155-35137358,35137476-351376... 33 0.11
07_01_1046 - 9138000-9138293,9139550-9139714,9139862-9140010,914... 31 0.34
03_06_0268 + 32758087-32758448,32758539-32759652 29 1.4
01_07_0188 - 41866689-41866763,41866889-41867155,41867277-418677... 28 2.4
10_07_0176 - 13826764-13827064,13827271-13827377,13827474-138278... 28 3.1
04_01_0568 - 7279478-7279590,7279749-7279988,7280078-7280141,728... 28 3.1
12_02_0591 + 20864861-20867329 27 4.1
07_03_1445 + 26580293-26580610,26580814-26581314,26581411-265815... 27 5.5
05_03_0512 + 14913356-14913769,14915907-14916032,14916129-149161... 27 5.5
11_03_0017 + 8990852-8990938,8991056-8991243,8991687-8991795,899... 27 7.2
09_02_0491 - 9857895-9858584,9858689-9859270 27 7.2
09_01_0110 - 1714783-1714803,1718645-1719370 27 7.2
07_03_0886 - 22293092-22293451,22294063-22294524 27 7.2
03_03_0129 - 14684003-14684123,14684205-14684323,14684406-146845... 27 7.2
02_01_0623 - 4676847-4676879,4676953-4677115,4677467-4677620,467... 27 7.2
12_01_0293 - 2215228-2215263,2215524-2215639,2215778-2215898,221... 26 9.6
12_01_0161 - 1215892-1216026,1216393-1216462,1216623-1216786,121... 26 9.6
09_04_0435 - 17545879-17546605,17546721-17546782,17547123-175473... 26 9.6
01_05_0668 - 24147412-24147618,24148019-24148286,24149506-241497... 26 9.6
>03_06_0619 -
35136435-35136728,35137155-35137358,35137476-35137646,
35137902-35138050,35138380-35138527,35138614-35138682,
35138767-35139027,35139223-35139417,35139772-35139888,
35140026-35140961
Length = 847
Score = 32.7 bits (71), Expect = 0.11
Identities = 25/93 (26%), Positives = 39/93 (41%), Gaps = 3/93 (3%)
Frame = +2
Query: 101 TAKGFRHQEI-CQISLMYPTSTLSVAE*TICSKIRLVHQRPPLTRTSSIGNDYSLDGKLN 277
T K FRH + C + Y ++ LS+ + + + HQ+ L T + GN+ + +
Sbjct: 323 TKKFFRHSGVHCVLVPRYASTKLSIFKQQVVGTLFTHHQKCVLVDTQATGNNRKITAFIG 382
Query: 278 LFKSPDTSVDF--NAGFKKFDTPFMKSSWEPNF 370
D D + FK DT F K P F
Sbjct: 383 GLDLCDGRYDTPEHRLFKDLDTAFNKDFHNPTF 415
>07_01_1046 -
9138000-9138293,9139550-9139714,9139862-9140010,
9140363-9140510,9140659-9140727,9140827-9141087,
9141498-9141692,9142932-9143048,9143701-9144477
Length = 724
Score = 31.1 bits (67), Expect = 0.34
Identities = 26/97 (26%), Positives = 41/97 (42%), Gaps = 4/97 (4%)
Frame = +2
Query: 92 HDITA-KGFRHQEI-CQISLMYPTSTLSVAE*TICSKIRLVHQRPPLTRTSSIGNDYSLD 265
HD A K FRH + C ++ Y ++ LS+ + + + HQ+ + T IGN+ +
Sbjct: 266 HDEEARKFFRHSGVHCVLAPRYASNKLSIFKQQVVGTLFTHHQKCVIVDTQVIGNNRKIT 325
Query: 266 GKLNLFKSPDTSVDF--NAGFKKFDTPFMKSSWEPNF 370
+ D D + FK DT F P F
Sbjct: 326 AFIGGLDLCDGRYDTPEHRLFKDLDTVFKDDFHNPTF 362
>03_06_0268 + 32758087-32758448,32758539-32759652
Length = 491
Score = 29.1 bits (62), Expect = 1.4
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = -2
Query: 147 ISDIWHISWWRKPFAVMSWLSLWKRFTLPAAVTLSPNPGMCVSVRLTP 4
++D+ + WW M+ + W LPAA L N G S L P
Sbjct: 1 MADLAVLQWWLGAMVAMAAAASWSGGVLPAAEALGMNWGTQASHPLPP 48
>01_07_0188 -
41866689-41866763,41866889-41867155,41867277-41867722,
41867945-41868033,41868279-41868368,41868661-41868739,
41868979-41869042,41869597-41869684,41869776-41869836,
41869906-41869969,41870134-41870188,41870275-41870346,
41870469-41870551,41870629-41870724,41871279-41871383,
41872159-41872227,41872470-41872561,41872667-41872886
Length = 704
Score = 28.3 bits (60), Expect = 2.4
Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Frame = +1
Query: 28 HPRVRR-QGDSCRQSESLPQR*PRHHSERLSPPRNMPDIANVPN-FNTVGGG 177
HP + QG S + +PQ + PP NMP + PN + GG
Sbjct: 589 HPMAMQVQGSSNQMMPQMPQHLIGMNQTHQGPPSNMPPMGGFPNGMGNIQGG 640
>10_07_0176 -
13826764-13827064,13827271-13827377,13827474-13827836,
13827912-13828079,13828153-13828374,13828784-13829023,
13829640-13829719,13829853-13830018,13830720-13830783,
13830861-13830962,13831085-13831227,13831370-13831474,
13831551-13831706,13832125-13832241,13832315-13832392,
13832466-13832550,13833334-13833455,13833546-13833611,
13835190-13835284,13835427-13835523,13835873-13835983,
13836083-13836164,13836292-13836353,13836620-13836685,
13838002-13838232
Length = 1142
Score = 27.9 bits (59), Expect = 3.1
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 127 NMPDIANVPNFNTVGGGIDYMFKDKIG 207
N P +A N N G ++Y+F DK G
Sbjct: 388 NTPALARTSNLNEELGQVEYIFSDKTG 414
>04_01_0568 -
7279478-7279590,7279749-7279988,7280078-7280141,
7280242-7280547,7280643-7280857,7281395-7281689,
7281906-7281983,7282070-7282705,7283016-7283102,
7283945-7284265,7285503-7287599
Length = 1483
Score = 27.9 bits (59), Expect = 3.1
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = -2
Query: 135 WHISWWRKPFAVMSWLSLWKRFTLPAAVTL 46
W R P V WLS W R L AA+ L
Sbjct: 284 WPAQGSRYPVGVALWLSFWPRVLLTAALGL 313
>12_02_0591 + 20864861-20867329
Length = 822
Score = 27.5 bits (58), Expect = 4.1
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -1
Query: 64 AGSCHLVSEPGDVCIRETY 8
AG CHL EPG V +R +
Sbjct: 299 AGECHLAGEPGLVAVRRFF 317
>07_03_1445 +
26580293-26580610,26580814-26581314,26581411-26581508,
26581900-26581978,26582065-26582325,26582409-26582576,
26582800-26583237
Length = 620
Score = 27.1 bits (57), Expect = 5.5
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 290 PDTSVDFNAGFKKFDTPFMKSSWEPNFGFSLS 385
PDT+ F AGF K T WE +GF +S
Sbjct: 414 PDTATIFGAGFGKGGTSL--PFWENVYGFDMS 443
>05_03_0512 +
14913356-14913769,14915907-14916032,14916129-14916185,
14916950-14917027,14917681-14917773
Length = 255
Score = 27.1 bits (57), Expect = 5.5
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = -2
Query: 198 IFEHIVYSATDSVEVGYISDIWHISWWR 115
++EH Y +V Y+S+IW + W+
Sbjct: 217 VWEHAYYLQYKNVRPDYLSNIWKVMNWK 244
>11_03_0017 +
8990852-8990938,8991056-8991243,8991687-8991795,
8992448-8992832,8993240-8993309,8993410-8993477,
8995009-8995124,8995211-8995317,8995488-8995627,
8995794-8996044
Length = 506
Score = 26.6 bits (56), Expect = 7.2
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = -1
Query: 130 YFLVAKAFRCDVVVIVVEEIHFAGSCHLVSEPGDV 26
Y+LV KA ++V I+V + AG H++ + D+
Sbjct: 281 YYLVEKAKDANIVGILVGTLGVAGYLHIIEQMKDL 315
>09_02_0491 - 9857895-9858584,9858689-9859270
Length = 423
Score = 26.6 bits (56), Expect = 7.2
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Frame = -2
Query: 126 SWWRKPFAVMSWL--SLWKRFTLPAAVTLSPNPGM 28
+WWR PFA+M+ L W + V S G+
Sbjct: 388 AWWRLPFAIMATLLMQFWPYIVIVVVVLYSKIRGV 422
>09_01_0110 - 1714783-1714803,1718645-1719370
Length = 248
Score = 26.6 bits (56), Expect = 7.2
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = +2
Query: 209 HQRPPLTRTSS--IGNDYSLDGKLNLFKSPDTSVDFNAGFKKFDTPFMKSSWEPNFGFSL 382
H PP T+ SS +G D + ++ SP+ ++F K FM S E G +
Sbjct: 29 HPNPPGTKQSSYEVGTDNIVPVTIDKL-SPEQKLEFVQIMKSAQEKFMNSFKETRQGTVI 87
Query: 383 SKY 391
KY
Sbjct: 88 QKY 90
>07_03_0886 - 22293092-22293451,22294063-22294524
Length = 273
Score = 26.6 bits (56), Expect = 7.2
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -2
Query: 162 VEVGYISDIWHISWWRKPFAVMSW 91
V +G+ D W W+ PFA +W
Sbjct: 78 VVLGFHVDYWDYRGWKDPFASSAW 101
>03_03_0129 -
14684003-14684123,14684205-14684323,14684406-14684501,
14684605-14684712,14684974-14685060,14685135-14685338,
14685429-14685488,14686096-14686264,14686400-14686473,
14686586-14686897,14687054-14687212
Length = 502
Score = 26.6 bits (56), Expect = 7.2
Identities = 21/67 (31%), Positives = 30/67 (44%)
Frame = -2
Query: 381 SENPKLGSQEDFMKGVSNFLKPALKSTEVSGLLKRFSFPSRE*SLPIDEVRVSGGR*CTN 202
+E LGS N + L+S LL+ FS P R +PI+ R+ G R T+
Sbjct: 75 AEQALLGSDASLAVHAGNHDQSPLRSIAFPPLLRFFSDPFRAFDIPIEGERL-GRRIATD 133
Query: 201 LIFEHIV 181
I +V
Sbjct: 134 AITTPVV 140
>02_01_0623 -
4676847-4676879,4676953-4677115,4677467-4677620,
4678413-4678554,4678641-4678706,4679389-4679922
Length = 363
Score = 26.6 bits (56), Expect = 7.2
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +2
Query: 302 VDFNAGFKKFDTPFMKSSW 358
VDF G+K D FM+S W
Sbjct: 143 VDFEDGYKTMDIKFMESVW 161
>12_01_0293 -
2215228-2215263,2215524-2215639,2215778-2215898,
2216024-2216264,2218162-2218364
Length = 238
Score = 26.2 bits (55), Expect = 9.6
Identities = 12/46 (26%), Positives = 19/46 (41%)
Frame = +2
Query: 38 FGDKVTAAGKVNLFHNDNHDITAKGFRHQEICQISLMYPTSTLSVA 175
F G + + N H +TA + +EIC + ST+ A
Sbjct: 191 FYSNALGVGGLKCYENPKHKVTAVPAKEEEICGATFKVEGSTILTA 236
>12_01_0161 -
1215892-1216026,1216393-1216462,1216623-1216786,
1217856-1217896,1218044-1218136,1218226-1218313,
1218520-1218573,1218656-1218771,1218964-1219041,
1219171-1219321,1219399-1219509
Length = 366
Score = 26.2 bits (55), Expect = 9.6
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -2
Query: 387 LESENPKLGSQEDFMKGVSNFLKPALKSTEVSGL 286
L ++ P + EDF K VSNF + +ST +GL
Sbjct: 142 LANKKPLTCAYEDFEKLVSNFRRMRFESTVGAGL 175
>09_04_0435 -
17545879-17546605,17546721-17546782,17547123-17547335,
17547506-17547590,17547904-17548061,17548174-17548294,
17548765-17548927,17548973-17549097,17550800-17550888,
17550970-17551636,17552671-17552717,17553506-17553862
Length = 937
Score = 26.2 bits (55), Expect = 9.6
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -1
Query: 352 GLHEGCIELLEAGVEIDRGVRTLEE 278
G E C +L+ VEID + TLEE
Sbjct: 531 GSSEQCERILDLTVEIDGDINTLEE 555
>01_05_0668 -
24147412-24147618,24148019-24148286,24149506-24149728,
24149822-24149996
Length = 290
Score = 26.2 bits (55), Expect = 9.6
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = -2
Query: 210 CTNLIFEHIVYSATDSVEVGYISDIWHISWWRKPFAVMSW 91
CT LIF +A+ + V Y+S WH W +++W
Sbjct: 140 CTTLIF----VAASIATFVTYLSHKWHKKEWNYDINLVTW 175
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,383,845
Number of Sequences: 37544
Number of extensions: 242847
Number of successful extensions: 657
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 644
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 657
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 684860244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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