Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0005_P05
(397 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear... 32 0.79
AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear... 32 0.79
BC041706-1|AAH41706.1| 1863|Homo sapiens DENN/MADD domain contai... 29 5.6
BC028057-1|AAH28057.1| 933|Homo sapiens DENND4A protein protein. 29 5.6
AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetit... 29 5.6
AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetit... 29 5.6
AK091368-1|BAC03648.1| 928|Homo sapiens protein ( Homo sapiens ... 29 5.6
AF534403-1|AAQ10514.1| 1865|Homo sapiens c-MYC promoter-binding ... 29 5.6
BC113713-1|AAI13714.2| 420|Homo sapiens neuropeptide FF recepto... 28 9.7
BC101636-1|AAI01637.1| 420|Homo sapiens neuropeptide FF recepto... 28 9.7
AF330053-1|AAK94197.1| 420|Homo sapiens neuropeptide NPFF recep... 28 9.7
AF268899-1|AAG41398.1| 420|Homo sapiens neuropeptide FF recepto... 28 9.7
AF257210-1|AAF87078.1| 420|Homo sapiens G-protein coupled recep... 28 9.7
AF236083-1|AAK58513.1| 408|Homo sapiens G-protein-coupled recep... 28 9.7
AF119815-1|AAD22047.1| 522|Homo sapiens G-protein-coupled recep... 28 9.7
>AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 31.9 bits (69), Expect = 0.79
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = +1
Query: 4 RSKSHGYTHPRVRRQGDSCRQSESLPQR*PRHHSERLSPPRNMP 135
RS+S +T PR R + D P R R +PPR MP
Sbjct: 289 RSRSPSHTRPRRRHRSDKMYSPRRRPSPRRRPSPRRRTPPRRMP 332
>AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 31.9 bits (69), Expect = 0.79
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = +1
Query: 4 RSKSHGYTHPRVRRQGDSCRQSESLPQR*PRHHSERLSPPRNMP 135
RS+S +T PR R + D P R R +PPR MP
Sbjct: 289 RSRSPSHTRPRRRHRSDKMYSPRRRPSPRRRPSPRRRTPPRRMP 332
>BC041706-1|AAH41706.1| 1863|Homo sapiens DENN/MADD domain
containing 4A protein.
Length = 1863
Score = 29.1 bits (62), Expect = 5.6
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = -1
Query: 142 RYLAYFLVAKAFRCDVVVIVVEEIHFAGSCHLVSEP 35
R YF+VA DV + EEIHF +CH V++P
Sbjct: 8 RVADYFVVAGL--TDVSKPLEEEIHFNDACHKVAKP 41
>BC028057-1|AAH28057.1| 933|Homo sapiens DENND4A protein protein.
Length = 933
Score = 29.1 bits (62), Expect = 5.6
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = -1
Query: 142 RYLAYFLVAKAFRCDVVVIVVEEIHFAGSCHLVSEP 35
R YF+VA DV + EEIHF +CH V++P
Sbjct: 8 RVADYFVVAGL--TDVSKPLEEEIHFNDACHKVAKP 41
>AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 29.1 bits (62), Expect = 5.6
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = +1
Query: 4 RSKSHGYTHPRVRRQGDSCRQSESLPQR*PRHHSERLSPPRNMP 135
RS+S +T PR R + S R+ P+R R R +PPR MP
Sbjct: 289 RSRSPSHTRPRRRHRSRSRRRPS--PRR--RPSPRRRTPPRRMP 328
>AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 29.1 bits (62), Expect = 5.6
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = +1
Query: 4 RSKSHGYTHPRVRRQGDSCRQSESLPQR*PRHHSERLSPPRNMP 135
RS+S +T PR R + S R+ P+R R R +PPR MP
Sbjct: 289 RSRSPSHTRPRRRHRSRSRRRPS--PRR--RPSPRRRTPPRRMP 328
>AK091368-1|BAC03648.1| 928|Homo sapiens protein ( Homo sapiens
cDNA FLJ34049 fis, clone FCBBF3000110, weakly similar to
CRAG protein. ).
Length = 928
Score = 29.1 bits (62), Expect = 5.6
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = -1
Query: 142 RYLAYFLVAKAFRCDVVVIVVEEIHFAGSCHLVSEP 35
R YF+VA DV + EEIHF +CH V++P
Sbjct: 8 RVADYFVVAGL--TDVSKPLEEEIHFNDACHKVAKP 41
>AF534403-1|AAQ10514.1| 1865|Homo sapiens c-MYC promoter-binding
protein IRLB protein.
Length = 1865
Score = 29.1 bits (62), Expect = 5.6
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = -1
Query: 142 RYLAYFLVAKAFRCDVVVIVVEEIHFAGSCHLVSEP 35
R YF+VA DV + EEIHF +CH V++P
Sbjct: 8 RVADYFVVAGL--TDVSKPLEEEIHFNDACHKVAKP 41
>BC113713-1|AAI13714.2| 420|Homo sapiens neuropeptide FF receptor 2
protein.
Length = 420
Score = 28.3 bits (60), Expect = 9.7
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -2
Query: 102 VMSWLSLWKRFTLPAAVTLSPNPGMCVSVRLTPW 1
++SWL LW L LSPN +++ + P+
Sbjct: 284 ILSWLPLWTLMMLSDYADLSPNELQIINIYIYPF 317
>BC101636-1|AAI01637.1| 420|Homo sapiens neuropeptide FF receptor 2
protein.
Length = 420
Score = 28.3 bits (60), Expect = 9.7
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -2
Query: 102 VMSWLSLWKRFTLPAAVTLSPNPGMCVSVRLTPW 1
++SWL LW L LSPN +++ + P+
Sbjct: 284 ILSWLPLWTLMMLSDYADLSPNELQIINIYIYPF 317
>AF330053-1|AAK94197.1| 420|Homo sapiens neuropeptide NPFF receptor
protein.
Length = 420
Score = 28.3 bits (60), Expect = 9.7
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -2
Query: 102 VMSWLSLWKRFTLPAAVTLSPNPGMCVSVRLTPW 1
++SWL LW L LSPN +++ + P+
Sbjct: 284 ILSWLPLWTLMMLSDYADLSPNELQIINIYIYPF 317
>AF268899-1|AAG41398.1| 420|Homo sapiens neuropeptide FF receptor 2
protein.
Length = 420
Score = 28.3 bits (60), Expect = 9.7
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -2
Query: 102 VMSWLSLWKRFTLPAAVTLSPNPGMCVSVRLTPW 1
++SWL LW L LSPN +++ + P+
Sbjct: 284 ILSWLPLWTLMMLSDYADLSPNELQIINIYIYPF 317
>AF257210-1|AAF87078.1| 420|Homo sapiens G-protein coupled receptor
HLWAR77 protein.
Length = 420
Score = 28.3 bits (60), Expect = 9.7
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -2
Query: 102 VMSWLSLWKRFTLPAAVTLSPNPGMCVSVRLTPW 1
++SWL LW L LSPN +++ + P+
Sbjct: 284 ILSWLPLWTLMMLSDYADLSPNELQIINIYIYPF 317
>AF236083-1|AAK58513.1| 408|Homo sapiens G-protein-coupled receptor
74 protein.
Length = 408
Score = 28.3 bits (60), Expect = 9.7
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -2
Query: 102 VMSWLSLWKRFTLPAAVTLSPNPGMCVSVRLTPW 1
++SWL LW L LSPN +++ + P+
Sbjct: 287 ILSWLPLWTLMMLSDYADLSPNELQIINIYIYPF 320
>AF119815-1|AAD22047.1| 522|Homo sapiens G-protein-coupled receptor
protein.
Length = 522
Score = 28.3 bits (60), Expect = 9.7
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -2
Query: 102 VMSWLSLWKRFTLPAAVTLSPNPGMCVSVRLTPW 1
++SWL LW L LSPN +++ + P+
Sbjct: 386 ILSWLPLWTLMMLSDYADLSPNELQIINIYIYPF 419
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,438,258
Number of Sequences: 237096
Number of extensions: 1298581
Number of successful extensions: 2902
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2876
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2901
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2813442310
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -