Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0005_P05
(397 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC025726-30|AAK73930.1| 324|Caenorhabditis elegans Hypothetical... 28 2.8
U23513-4|AAP68947.1| 322|Caenorhabditis elegans Hypothetical pr... 27 4.9
CU457740-11|CAM36341.1| 353|Caenorhabditis elegans Hypothetical... 27 4.9
AF016679-5|AAB66157.1| 485|Caenorhabditis elegans Hypothetical ... 27 4.9
Z82267-3|CAB05191.1| 186|Caenorhabditis elegans Hypothetical pr... 27 6.4
Z78061-1|CAB01494.1| 658|Caenorhabditis elegans Hypothetical pr... 27 6.4
AF016425-1|AAD34668.1| 458|Caenorhabditis elegans Hypothetical ... 27 6.4
Z81057-6|CAB02913.1| 221|Caenorhabditis elegans Hypothetical pr... 26 8.5
D85499-1|BAA12821.1| 221|Caenorhabditis elegans manganese super... 26 8.5
D12984-1|BAA02363.1| 221|Caenorhabditis elegans manganese super... 26 8.5
>AC025726-30|AAK73930.1| 324|Caenorhabditis elegans Hypothetical
protein Y71G12B.4 protein.
Length = 324
Score = 27.9 bits (59), Expect = 2.8
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +2
Query: 41 GDKVTAAGKVNLFHNDNHDITAKGFRHQEICQISLMYPT 157
GD VTA + L +N+N DI+ E+C +MY T
Sbjct: 257 GDMVTA--RCILQNNENRDISMGATEEDEMCNFYIMYWT 293
>U23513-4|AAP68947.1| 322|Caenorhabditis elegans Hypothetical
protein D2021.2a protein.
Length = 322
Score = 27.1 bits (57), Expect = 4.9
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 135 WHISWWRKPFAVMSWLSLWKRFTLPAAVTLSP 40
W++ WW + V+S L+L FTL TL P
Sbjct: 101 WYVPWWAQMLFVLSVLAL--AFTLFRIGTLDP 130
>CU457740-11|CAM36341.1| 353|Caenorhabditis elegans Hypothetical
protein C50E10.11 protein.
Length = 353
Score = 27.1 bits (57), Expect = 4.9
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = -2
Query: 138 IWHISWWRKPFAVMSWLSLWKRFTLPAAVTLSPNP 34
I+ +S W K +SW+S + + T A + P P
Sbjct: 301 IFSVSTWSKALLRLSWISKFNKMTSENAHKVHPKP 335
>AF016679-5|AAB66157.1| 485|Caenorhabditis elegans Hypothetical
protein T28C12.2 protein.
Length = 485
Score = 27.1 bits (57), Expect = 4.9
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -2
Query: 348 FMKGVSNFLKPALKSTEVSGLLKRFSFPSRE*SLPI 241
F G NFL P +++TEV G L + + +P+
Sbjct: 343 FYSGPLNFLPPGVETTEVGGCLVEYHWCQETTRVPL 378
>Z82267-3|CAB05191.1| 186|Caenorhabditis elegans Hypothetical
protein F38C2.5 protein.
Length = 186
Score = 26.6 bits (56), Expect = 6.4
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +1
Query: 97 HHSERLSPPRNMPDIANVPNFNTVGGGIDYMFKDKIGASATAAHTDF 237
H + +P +N P + ++ G+ F D GASA+++ TDF
Sbjct: 140 HRAVEPTPAQN-PLMPQFSSWFAPSSGLSREFLDNFGASASSSSTDF 185
>Z78061-1|CAB01494.1| 658|Caenorhabditis elegans Hypothetical
protein C48G7.1 protein.
Length = 658
Score = 26.6 bits (56), Expect = 6.4
Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = +3
Query: 213 SDRRSHGL--HQSVTITPWTES*TSSRVLTPRS 305
SDRRS + H+SVT +P TSS + PRS
Sbjct: 219 SDRRSQSVRSHKSVTASPKLGHSTSSTLSRPRS 251
>AF016425-1|AAD34668.1| 458|Caenorhabditis elegans Hypothetical
protein F59A7.1 protein.
Length = 458
Score = 26.6 bits (56), Expect = 6.4
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 4/34 (11%)
Frame = +2
Query: 23 THIP----GFGDKVTAAGKVNLFHNDNHDITAKG 112
+H+P GFGDK T + + F+N N+DI G
Sbjct: 237 SHLPDPRLGFGDKTTGSDSLQKFYN-NNDIPTCG 269
>Z81057-6|CAB02913.1| 221|Caenorhabditis elegans Hypothetical
protein F10D11.1 protein.
Length = 221
Score = 26.2 bits (55), Expect = 8.5
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = -2
Query: 198 IFEHIVYSATDSVEVGYISDIWHISWWR 115
++EH Y +V Y++ IW I+ W+
Sbjct: 183 VWEHAYYLQYKNVRPDYVNAIWKIANWK 210
>D85499-1|BAA12821.1| 221|Caenorhabditis elegans manganese
superoxide dismutase protein.
Length = 221
Score = 26.2 bits (55), Expect = 8.5
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = -2
Query: 198 IFEHIVYSATDSVEVGYISDIWHISWWR 115
++EH Y +V Y++ IW I+ W+
Sbjct: 183 VWEHAYYLQYKNVRPDYVNAIWKIANWK 210
>D12984-1|BAA02363.1| 221|Caenorhabditis elegans manganese
superoxide dismutaseprecursor protein.
Length = 221
Score = 26.2 bits (55), Expect = 8.5
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = -2
Query: 198 IFEHIVYSATDSVEVGYISDIWHISWWR 115
++EH Y +V Y++ IW I+ W+
Sbjct: 183 VWEHAYYLQYKNVRPDYVNAIWKIANWK 210
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,283,741
Number of Sequences: 27780
Number of extensions: 192893
Number of successful extensions: 469
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 451
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 469
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 609015246
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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