Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_P05
         (397 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    25   0.24 
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    25   0.24 
M29491-1|AAA27726.1|   79|Apis mellifera protein ( Bee homeobox-...    22   2.2  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   2.2  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               21   5.1  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    21   6.8  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    21   6.8  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    21   6.8  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          20   9.0  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      20   9.0  

>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 25.4 bits (53), Expect = 0.24
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -2

Query: 123 WWRKPFAVMSWLSLWKRFTLPAAVT 49
           +W  PF V+  L +W R+T    +T
Sbjct: 180 FWVTPFTVLPLLKVWGRYTTEGFLT 204


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 25.4 bits (53), Expect = 0.24
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -2

Query: 123 WWRKPFAVMSWLSLWKRFTLPAAVT 49
           +W  PF V+  L +W R+T    +T
Sbjct: 180 FWVTPFTVLPLLKVWGRYTTEGFLT 204


>M29491-1|AAA27726.1|   79|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone H17. ).
          Length = 79

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = -2

Query: 117 RKPFAVMSWLSLWKRFTLPAAVTLSPNPGMCVSVRLT 7
           R PF     LSL K+F     +T++       S+ LT
Sbjct: 13  RTPFTTQQLLSLEKKFREKQYLTIAERAEFSSSLHLT 49


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 15/50 (30%), Positives = 24/50 (48%)
 Frame = +2

Query: 242 IGNDYSLDGKLNLFKSPDTSVDFNAGFKKFDTPFMKSSWEPNFGFSLSKY 391
           + +DY+L+ KLN F   D  ++    F +   PF    W P+  + L  Y
Sbjct: 210 LNHDYNLENKLNYF-IEDIGLNTYYFFLRQAFPF----WLPSKEYDLPDY 254


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -3

Query: 281 RGSAFRPGSNRYRLMKSV 228
           RG  F P  NRYR  K +
Sbjct: 773 RGILFMPIPNRYREAKQI 790


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = -2

Query: 114 KPFAVMSWLSLWKRFTLPAAVTL 46
           K  +V  W S W     P+A T+
Sbjct: 329 KTISVQQWNSYWGILGFPSAPTI 351


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +2

Query: 311 NAGFKKFDTPFMKSSWEP 364
           NAGF K     ++ +W P
Sbjct: 423 NAGFSKIAENLLEKNWLP 440


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = -2

Query: 114 KPFAVMSWLSLWKRFTLPAAVTL 46
           K  +V  W S W     P+A T+
Sbjct: 329 KTISVQQWNSYWGILGFPSAPTI 351


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 8/22 (36%), Positives = 10/22 (45%)
 Frame = +2

Query: 107 KGFRHQEICQISLMYPTSTLSV 172
           K  RHQ +    L+Y   T  V
Sbjct: 100 KEMRHQAVVLFRLLYSAKTFDV 121


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 8/22 (36%), Positives = 10/22 (45%)
 Frame = +2

Query: 107 KGFRHQEICQISLMYPTSTLSV 172
           K  RHQ +    L+Y   T  V
Sbjct: 100 KEMRHQAVVLFRLLYSAKTFDV 121


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,006
Number of Sequences: 438
Number of extensions: 2498
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9761793
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)