Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0005_P01
(647 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF078157-16|AAG24082.1| 343|Caenorhabditis elegans Serpentine r... 33 0.23
Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical pr... 30 1.6
AF067937-7|AAN84819.1| 392|Caenorhabditis elegans Hypothetical ... 29 2.8
AF067937-6|AAF99915.1| 426|Caenorhabditis elegans Hypothetical ... 29 2.8
Z83111-4|CAB05535.2| 498|Caenorhabditis elegans Hypothetical pr... 28 5.0
U39651-6|AAL11483.1| 286|Caenorhabditis elegans Temporarily ass... 28 5.0
U39651-5|AAL11482.2| 395|Caenorhabditis elegans Temporarily ass... 28 5.0
Z68752-7|CAA92982.2| 693|Caenorhabditis elegans Hypothetical pr... 27 8.7
U13644-7|AAM48536.2| 700|Caenorhabditis elegans Hypothetical pr... 27 8.7
U13644-6|AAB52678.1| 739|Caenorhabditis elegans Hypothetical pr... 27 8.7
>AF078157-16|AAG24082.1| 343|Caenorhabditis elegans Serpentine
receptor, class h protein89 protein.
Length = 343
Score = 32.7 bits (71), Expect = 0.23
Identities = 33/92 (35%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Frame = +3
Query: 12 YTNMFGKIVFLLLVALCVGVQIRYLIVSEPVYYIQHYEEPELLTSSRVR-RDAHGAL-TL 185
+TNMF IV LLV+ V QI + IV YY+ Y P LLTSS+ R H + TL
Sbjct: 207 WTNMFMAIVIPLLVS-SVMSQILFFIVCS-FYYL--YLAPSLLTSSQTRSNQKHFFIGTL 262
Query: 186 NSDGTSGAGVKVPFAGNDKNIVSAIGSLDLTN 281
G + + + + F+ S + +LTN
Sbjct: 263 KQTGVALSVMILAFSIATLTFKSKQSTQELTN 294
>Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical protein
F32H2.5 protein.
Length = 2586
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = +3
Query: 258 IGSLDLTNRQKLGAATAGVALDNVNGHGVSLTDTHIPGFGD 380
IG +DL+ LG A LDNV+ HG+ L P GD
Sbjct: 1832 IGKVDLSQNSSLGMAKL---LDNVSVHGILLDSIMDPTVGD 1869
>AF067937-7|AAN84819.1| 392|Caenorhabditis elegans Hypothetical
protein F22F7.1b protein.
Length = 392
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 210 GVKVPFAGNDKNIVSAIGSLDLTNRQ 287
GV VPF G DK+I++ D T+RQ
Sbjct: 237 GVAVPFPGADKSIINRSQYYDATSRQ 262
>AF067937-6|AAF99915.1| 426|Caenorhabditis elegans Hypothetical
protein F22F7.1a protein.
Length = 426
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 210 GVKVPFAGNDKNIVSAIGSLDLTNRQ 287
GV VPF G DK+I++ D T+RQ
Sbjct: 237 GVAVPFPGADKSIINRSQYYDATSRQ 262
>Z83111-4|CAB05535.2| 498|Caenorhabditis elegans Hypothetical
protein F57G8.5 protein.
Length = 498
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = +3
Query: 6 FQYTNMFGKIVFLLLVALCVGVQIRYLIVSEPVYYIQHYEEPE 134
F ++ + KIV L + +C+G+ +R L+V ++ H+ E
Sbjct: 351 FDFSTLSWKIVLLCISVICIGLIVRALLVMLTTHF-SHFNVKE 392
>U39651-6|AAL11483.1| 286|Caenorhabditis elegans Temporarily
assigned gene nameprotein 22, isoform b protein.
Length = 286
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 540 ASATAAHTDFINRNDYSLDGKLNLFQSP*HFGRFQR 647
+S+ A+H DF + YS +G++ + Q P +FGR R
Sbjct: 166 SSSKASHQDFAPQ--YSGNGEIPMEQQPWYFGRISR 199
>U39651-5|AAL11482.2| 395|Caenorhabditis elegans Temporarily
assigned gene nameprotein 22, isoform a protein.
Length = 395
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 540 ASATAAHTDFINRNDYSLDGKLNLFQSP*HFGRFQR 647
+S+ A+H DF + YS +G++ + Q P +FGR R
Sbjct: 275 SSSKASHQDFAPQ--YSGNGEIPMEQQPWYFGRISR 308
>Z68752-7|CAA92982.2| 693|Caenorhabditis elegans Hypothetical
protein T12G3.1 protein.
Length = 693
Score = 27.5 bits (58), Expect = 8.7
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = -2
Query: 322 SSATPAVAAPSFCLLVKSKEPIALTIFLSLPAKGTLTPAPEVPSELS--VRAPCASLRTL 149
+SATPAV AP+ + V PI T+ + L P P E++ V AP + +
Sbjct: 534 TSATPAVTAPASIVPVTPTAPIVETLIVP-----PLPPVESNPEEVTPMVTAPISIHSSF 588
Query: 148 ELVNSSGSS 122
E ++S S
Sbjct: 589 ENISSDFES 597
>U13644-7|AAM48536.2| 700|Caenorhabditis elegans Hypothetical
protein F56D2.6b protein.
Length = 700
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +1
Query: 106 TIFNTMRSLNY*QALESAGTRTELSRSTPMVPLVLELKYPLLVTTRI 246
T+ + LNY QA+ G TEL PL +L L+ +T +
Sbjct: 479 TLMRALELLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLITSTEL 525
>U13644-6|AAB52678.1| 739|Caenorhabditis elegans Hypothetical
protein F56D2.6a protein.
Length = 739
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +1
Query: 106 TIFNTMRSLNY*QALESAGTRTELSRSTPMVPLVLELKYPLLVTTRI 246
T+ + LNY QA+ G TEL PL +L L+ +T +
Sbjct: 479 TLMRALELLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLITSTEL 525
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,982,013
Number of Sequences: 27780
Number of extensions: 318274
Number of successful extensions: 891
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 856
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 891
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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