Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_P01
         (647 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   2.5  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    22   4.4  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    22   4.4  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   7.8  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   7.8  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 14/52 (26%), Positives = 23/52 (44%)
 Frame = +1

Query: 448  SPPEICQISLMYPTSTLSVAE*TICSKIRLVHQRPPLTRTSSIVTITPWTES 603
            S P  CQ     P + +++    + S+  LV  RPP      I   T +T++
Sbjct: 1168 SAPIHCQTEQDAPEAPIAIKALVMSSESILVSWRPPSQPNGVITQYTVYTKA 1219


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -2

Query: 451 AKAFAVMSW*SLWKRFTLPAAVTL 380
           AK  +V  W S W     P+A T+
Sbjct: 328 AKTISVQQWNSYWGILGFPSAPTI 351


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -2

Query: 451 AKAFAVMSW*SLWKRFTLPAAVTL 380
           AK  +V  W S W     P+A T+
Sbjct: 328 AKTISVQQWNSYWGILGFPSAPTI 351


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +3

Query: 78  RYLIVSEPVYYIQH 119
           RY+ V++P+ Y +H
Sbjct: 284 RYIAVTQPIKYAKH 297


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 13/51 (25%), Positives = 22/51 (43%)
 Frame = +3

Query: 339 GVSLTDTHIPGFGDKVTAAGKVNLFHNDYHDITAKAFATRNMPDIANVPXF 491
           G  +T+      G +  AAG+  LF  DY++   +   T +     N+  F
Sbjct: 527 GEVITNEEAEKRGKEYDAAGRTYLFDLDYNESEEQCPYTVDAAIYGNISHF 577


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,934
Number of Sequences: 438
Number of extensions: 4093
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19560480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)