Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_O24
         (651 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.    23   1.9  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    23   1.9  
L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein pro...    21   7.8  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   7.8  

>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -2

Query: 611 RCGRSLEEIQFSP 573
           RCGRSLE   F+P
Sbjct: 109 RCGRSLEGYPFNP 121


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -2

Query: 611 RCGRSLEEIQFSP 573
           RCGRSLE   F+P
Sbjct: 125 RCGRSLEGYPFNP 137


>L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein
           protein.
          Length = 74

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -2

Query: 500 HVVHSGTDSVEVRNLRNIWQVFSGE 426
           H  H     V+V NLR   +V +GE
Sbjct: 39  HCSHCDRQFVQVANLRRHLRVHTGE 63


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 13/51 (25%), Positives = 23/51 (45%)
 Frame = +1

Query: 421  KHSPLKTCQIFLKFRTSTLSVPEWTTCSRTRLVHLRPPLTPMSLIVMTTLW 573
            K +P+  CQ       + +++      S + LV  RPP  P  +I   T++
Sbjct: 1167 KSAPIH-CQTEQDAPEAPIAIKALVMSSESILVSWRPPSQPNGVITQYTVY 1216


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,470
Number of Sequences: 438
Number of extensions: 4038
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)