Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_O23
         (573 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U21322-7|AAA62545.1|   84|Caenorhabditis elegans Hypothetical pr...    60   1e-09
AF016669-2|AAB66099.2|  455|Caenorhabditis elegans Hypothetical ...    28   4.1  
U80845-2|AAK39179.2|  582|Caenorhabditis elegans Hypothetical pr...    28   5.4  
U50313-5|AAA92329.1|  270|Caenorhabditis elegans Palmitoyl prote...    27   9.5  
AY691522-1|AAU01161.1|  254|Caenorhabditis elegans palmitoyl pro...    27   9.5  

>U21322-7|AAA62545.1|   84|Caenorhabditis elegans Hypothetical
           protein K10D2.7 protein.
          Length = 84

 Score = 60.1 bits (139), Expect = 1e-09
 Identities = 31/83 (37%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
 Frame = +1

Query: 121 VTVKLLFFARSKELAGTRESTIQLPKKISYHQLLNIISENY-NLGTIKNNILLAKNEEVC 297
           +++K+LFF  + +L G RE  I  P++  Y ++   I ENY  L  I+  ++LA ++E  
Sbjct: 2   ISIKVLFFGEACQLVGKREEAIDFPEETDYEEIRKTILENYPALQKIEKVMMLAVDQEYA 61

Query: 298 EENFDIEIKEKDSIAVIPPLSGG 366
                 E+     IAVIPPLSGG
Sbjct: 62  NPGDRFELVRFTEIAVIPPLSGG 84


>AF016669-2|AAB66099.2|  455|Caenorhabditis elegans Hypothetical
           protein K10G6.4 protein.
          Length = 455

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 19/61 (31%), Positives = 33/61 (54%)
 Frame = +1

Query: 148 RSKELAGTRESTIQLPKKISYHQLLNIISENYNLGTIKNNILLAKNEEVCEENFDIEIKE 327
           RS+  A ++ S ++   K     +  I SEN    T+    L  KNEE+ +EN ++E+K+
Sbjct: 222 RSEAYAKSQISQLEDTVKSLKLHIEKIASENDQ--TVVVETLRLKNEELLKENLNLEMKQ 279

Query: 328 K 330
           +
Sbjct: 280 R 280


>U80845-2|AAK39179.2|  582|Caenorhabditis elegans Hypothetical
           protein C24A8.1 protein.
          Length = 582

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 8/21 (38%), Positives = 16/21 (76%)
 Frame = +1

Query: 28  ISRNYWHLLPIYILYLYCFIN 90
           ++R +WHL P+++ Y YC ++
Sbjct: 50  VNRLHWHL-PLFVCYFYCVLD 69


>U50313-5|AAA92329.1|  270|Caenorhabditis elegans Palmitoyl protein
           thioesteraseprotein 1 protein.
          Length = 270

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = +1

Query: 217 LLNIISENYNLGTIKNNILLAKNEEVCEENFDIEIKEKDS 336
           L +I +EN N  T K N+L  KN  + + N D  +  KDS
Sbjct: 165 LADINNENNNNPTYKRNLLSLKNLVLVKFNQDHMVVPKDS 204


>AY691522-1|AAU01161.1|  254|Caenorhabditis elegans palmitoyl
           protein thioesterase protein.
          Length = 254

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = +1

Query: 217 LLNIISENYNLGTIKNNILLAKNEEVCEENFDIEIKEKDS 336
           L +I +EN N  T K N+L  KN  + + N D  +  KDS
Sbjct: 165 LADINNENNNNPTYKRNLLSLKNLVLVKFNQDHMVVPKDS 204


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,220,418
Number of Sequences: 27780
Number of extensions: 176766
Number of successful extensions: 492
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 491
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 491
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1184216096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)