Samia BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_O21
         (448 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC23H3.03c |||nitrogen permease regulator family|Schizosacchar...    27   1.7  
SPBC31F10.16 |||ChAPs family protein|Schizosaccharomyces pombe|c...    26   2.3  
SPCC126.09 |||vacuolar membrane zinc transporter |Schizosaccharo...    26   2.3  
SPBC30D10.10c |tor1||phosphatidylinositol kinase Tor1|Schizosacc...    26   2.3  
SPAC20G8.03 |itr2||MFS myo-inositol transporter|Schizosaccharomy...    25   5.3  
SPBC713.04c |||U3 snoRNP-associated protein Utp1|Schizosaccharom...    25   7.0  
SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces p...    24   9.3  

>SPAC23H3.03c |||nitrogen permease regulator
           family|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 409

 Score = 26.6 bits (56), Expect = 1.7
 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = -2

Query: 324 PSYKRILSLLYILWNVIHYISKLNAK--ILTYISCVFITINN 205
           P  KR+   L +L   IHYIS LN +  I + I  +   +NN
Sbjct: 120 PLVKRLARNLEVLEKQIHYISDLNKRPVIFSVIEQILEDMNN 161


>SPBC31F10.16 |||ChAPs family protein|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 679

 Score = 26.2 bits (55), Expect = 2.3
 Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
 Frame = -2

Query: 429 TYLQIRVIYGYIPNQSSTCTNTIRLALFTPSRKRFPSYKRILSLLYILW-NVIHYISKLN 253
           T++   ++ G       TC  +  L LF   R   P    +L+ LY+L  + +H +  L+
Sbjct: 236 THVNNHLVRGIFAYLKQTCRYSAALNLFEKLRVSIPEVSVLLAELYLLMDHEVHAVRILH 295

Query: 252 AKIL 241
             +L
Sbjct: 296 DSLL 299


>SPCC126.09 |||vacuolar membrane zinc transporter
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 418

 Score = 26.2 bits (55), Expect = 2.3
 Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
 Frame = -1

Query: 430 HIFTNKSHLWLHSESVFD-LHQHYPVS 353
           +IF +  H WLH  S    LH H+ VS
Sbjct: 131 YIFNHFLHKWLHESSQTGFLHDHFSVS 157


>SPBC30D10.10c |tor1||phosphatidylinositol kinase
           Tor1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 2335

 Score = 26.2 bits (55), Expect = 2.3
 Identities = 20/67 (29%), Positives = 31/67 (46%)
 Frame = -2

Query: 444 TSNNYTYLQIRVIYGYIPNQSSTCTNTIRLALFTPSRKRFPSYKRILSLLYILWNVIHYI 265
           T++ YT     +     P+Q S  T +I LAL T     F  Y  I    +I  +V+ Y+
Sbjct: 432 TNDTYTPSFTNIYSAREPDQRSKSTESIILALETLGTFNFTGYSLI---SFIQESVLSYL 488

Query: 264 SKLNAKI 244
              N++I
Sbjct: 489 ENDNSEI 495


>SPAC20G8.03 |itr2||MFS myo-inositol transporter|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 557

 Score = 25.0 bits (52), Expect = 5.3
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +3

Query: 3   FHNIIEAINMYGTMWLFAVICVIGLL 80
           F  ++E+I   GT  LFA  C +GL+
Sbjct: 488 FLTMMESITPTGTFALFAGFCFVGLV 513


>SPBC713.04c |||U3 snoRNP-associated protein
           Utp1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 854

 Score = 24.6 bits (51), Expect = 7.0
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +3

Query: 126 FQVRRISRREPGGNREKTNRWLPKSAHY 209
           FQ   +   E   N+ +T+ WL K  HY
Sbjct: 223 FQAGEVIDEEAEENKTRTHIWLIKERHY 250


>SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 531

 Score = 24.2 bits (50), Expect = 9.3
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -2

Query: 156 ALAAIFFAPETRGKSLEEIEK 94
           A+    FA ET+G +LEEI +
Sbjct: 449 AIVIFLFAKETKGLTLEEINE 469


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,887,301
Number of Sequences: 5004
Number of extensions: 39046
Number of successful extensions: 135
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 135
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 164204010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)