Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_O21
         (448 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z54284-5|CAA91062.1|  444|Caenorhabditis elegans Hypothetical pr...    32   0.22 
AF039046-2|AAB94218.2|  516|Caenorhabditis elegans Hypothetical ...    31   0.50 
AL021497-2|CAA16400.1|  606|Caenorhabditis elegans Hypothetical ...    30   0.67 
AL021497-3|CAA16405.1|  613|Caenorhabditis elegans Hypothetical ...    30   0.88 
AF040646-6|AAK31540.1|  510|Caenorhabditis elegans Hypothetical ...    28   3.6  
AF040646-5|AAK31539.1|  492|Caenorhabditis elegans Hypothetical ...    28   3.6  
AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal ne...    27   4.7  
Z46381-4|CAA86519.2|  604|Caenorhabditis elegans Hypothetical pr...    27   6.2  
U40933-4|AAA81674.1|  778|Caenorhabditis elegans Caenorhabditis ...    27   8.2  
U23511-14|AAC46799.1|  357|Caenorhabditis elegans Hypothetical p...    27   8.2  
AL034393-22|CAD36499.1|  655|Caenorhabditis elegans Hypothetical...    27   8.2  
AL034393-21|CAA22320.2|  681|Caenorhabditis elegans Hypothetical...    27   8.2  
AF497833-1|AAM18111.1|  655|Caenorhabditis elegans putative Na-H...    27   8.2  
AF497832-1|AAM18110.1|  681|Caenorhabditis elegans putative Na-H...    27   8.2  

>Z54284-5|CAA91062.1|  444|Caenorhabditis elegans Hypothetical
           protein D2085.6 protein.
          Length = 444

 Score = 31.9 bits (69), Expect = 0.22
 Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = -2

Query: 435 NYTYLQIRVIYGYI-PNQSSTCTNTIRLALFTPSRKRF 325
           +YT  +  V+ G + PN+ ST  N I  +LFTP R +F
Sbjct: 161 SYTSKENTVLRGKLDPNKVSTIPNAIETSLFTPDRNQF 198


>AF039046-2|AAB94218.2|  516|Caenorhabditis elegans Hypothetical
           protein R09B5.11 protein.
          Length = 516

 Score = 30.7 bits (66), Expect = 0.50
 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
 Frame = -2

Query: 234 ISCVFITINNA-HSSGATC*SFLDFLQALAAIFFAPETRGKSLEEIEKRL 88
           +   F+ INN  H       +F  F  A+    F PET+GKS   I K L
Sbjct: 458 VGLTFLPINNIIHQYAFLMFTFFTFTFAIFTWKFVPETKGKSPSAIRKEL 507


>AL021497-2|CAA16400.1|  606|Caenorhabditis elegans Hypothetical
           protein Y51A2D.4 protein.
          Length = 606

 Score = 30.3 bits (65), Expect = 0.67
 Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
 Frame = +3

Query: 9   NIIEAINMYGTMWLFAVICVIGLLFVLVFSRFPPG-SCREFQ---VRRISRREPGGNREK 176
           ++ + I  YG  WL+A + VI  +F+L       G S  E +   + +  RRE    R +
Sbjct: 523 SLTQVIGKYGAFWLYAGLTVIAFIFILFLVPETKGYSIEEVEMLFMNKKQRREAESRRRE 582

Query: 177 T 179
           T
Sbjct: 583 T 583


>AL021497-3|CAA16405.1|  613|Caenorhabditis elegans Hypothetical
           protein Y51A2D.5 protein.
          Length = 613

 Score = 29.9 bits (64), Expect = 0.88
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +3

Query: 9   NIIEAINMYGTMWLFAVICVIGLLFV 86
           ++  AI  YG  WL+A+  +I  +F+
Sbjct: 531 SLTHAITKYGAFWLYAIFTIIAFIFI 556


>AF040646-6|AAK31540.1|  510|Caenorhabditis elegans Hypothetical
           protein H17B01.1b protein.
          Length = 510

 Score = 27.9 bits (59), Expect = 3.6
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = -2

Query: 138 FAPETRGKSLEEIEKRLTQR 79
           F PET+GKS+E+I+    +R
Sbjct: 490 FVPETKGKSIEQIQAEFEKR 509


>AF040646-5|AAK31539.1|  492|Caenorhabditis elegans Hypothetical
           protein H17B01.1a protein.
          Length = 492

 Score = 27.9 bits (59), Expect = 3.6
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = -2

Query: 138 FAPETRGKSLEEIEKRLTQR 79
           F PET+GKS+E+I+    +R
Sbjct: 472 FVPETKGKSIEQIQAEFEKR 491


>AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal
            neurexin-like protein 1 protein.
          Length = 1655

 Score = 27.5 bits (58), Expect = 4.7
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = +3

Query: 42   MWLFAVICVIGLLFVLVFSRFPPGSCRE 125
            MW+  +I V+G++F+++F  F    CRE
Sbjct: 1464 MWVVFIIFVLGVIFLIIFCIFMK-CCRE 1490


>Z46381-4|CAA86519.2|  604|Caenorhabditis elegans Hypothetical
           protein M01F1.5 protein.
          Length = 604

 Score = 27.1 bits (57), Expect = 6.2
 Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
 Frame = -2

Query: 234 ISCVFITINNAHSSGATC*SFLDF-LQALAAIFF-APETRGKSLEEIE 97
           +S  F++++ A +   T   +    + AL  +FF  PET+G S++E+E
Sbjct: 521 VSLTFLSLSQAATKYGTFFIYCGCTMVALVFVFFFVPETKGYSIDEVE 568


>U40933-4|AAA81674.1|  778|Caenorhabditis elegans Caenorhabditis
           zeste white 10 (drosophila) homolog protein 1 protein.
          Length = 778

 Score = 26.6 bits (56), Expect = 8.2
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = -2

Query: 378 TCTNTIRLALFTPSRKRFPSYKRILSLLYILWNVIHYIS 262
           T  N +RL +    RK    +  I ++  I +N  HYIS
Sbjct: 497 TAENIVRLYVILTPRKHAELFSSIPNMAAIFYNNCHYIS 535


>U23511-14|AAC46799.1|  357|Caenorhabditis elegans Hypothetical
           protein C32D5.12 protein.
          Length = 357

 Score = 26.6 bits (56), Expect = 8.2
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = -2

Query: 282 NVIHYISKLNAKILTYISCVFITINNAHSSGATC*SFLDF 163
           +V+  ++ LN K L  I C +  I N  + G     FLD+
Sbjct: 101 SVVDTMTNLNIKTLVNIGCAYCPIPNEDNYGLAQDVFLDY 140


>AL034393-22|CAD36499.1|  655|Caenorhabditis elegans Hypothetical
           protein Y18D10A.6b protein.
          Length = 655

 Score = 26.6 bits (56), Expect = 8.2
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = +3

Query: 3   FHNIIEAINMYGTMWLFAVICVIGLLFVLVF 95
           F  +I A++  GT+ +F  + V  LL++LVF
Sbjct: 213 FAAMISAVDPVGTLAIFQAVKVESLLYMLVF 243


>AL034393-21|CAA22320.2|  681|Caenorhabditis elegans Hypothetical
           protein Y18D10A.6a protein.
          Length = 681

 Score = 26.6 bits (56), Expect = 8.2
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = +3

Query: 3   FHNIIEAINMYGTMWLFAVICVIGLLFVLVF 95
           F  +I A++  GT+ +F  + V  LL++LVF
Sbjct: 239 FAAMISAVDPVGTLAIFQAVKVESLLYMLVF 269


>AF497833-1|AAM18111.1|  655|Caenorhabditis elegans putative Na-H
           exchanger isoform 8b protein.
          Length = 655

 Score = 26.6 bits (56), Expect = 8.2
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = +3

Query: 3   FHNIIEAINMYGTMWLFAVICVIGLLFVLVF 95
           F  +I A++  GT+ +F  + V  LL++LVF
Sbjct: 213 FAAMISAVDPVGTLAIFQAVKVESLLYMLVF 243


>AF497832-1|AAM18110.1|  681|Caenorhabditis elegans putative Na-H
           exchanger isoform 8a protein.
          Length = 681

 Score = 26.6 bits (56), Expect = 8.2
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = +3

Query: 3   FHNIIEAINMYGTMWLFAVICVIGLLFVLVF 95
           F  +I A++  GT+ +F  + V  LL++LVF
Sbjct: 239 FAAMISAVDPVGTLAIFQAVKVESLLYMLVF 269


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,464,869
Number of Sequences: 27780
Number of extensions: 218556
Number of successful extensions: 666
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 666
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 777938954
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)