Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0005_O19
(749 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0824 - 32243495-32244319,32244449-32244859 69 4e-12
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 61 1e-09
11_02_0011 - 7337618-7338496,7338596-7338991 59 4e-09
11_01_0750 - 6315126-6315896,6316371-6316784 58 7e-09
01_01_1152 + 9170628-9171899 58 1e-08
11_02_0012 - 7346282-7347136,7347234-7347593 54 9e-08
03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869 51 1e-06
11_01_0771 + 6453130-6454488 49 5e-06
11_02_0014 - 7352619-7352918,7353173-7353418 47 1e-05
11_01_0767 + 6438648-6438809,6439146-6440000 46 2e-05
04_04_0619 + 26652923-26653267,26653440-26654273 46 3e-05
05_06_0044 - 25150322-25151260 44 2e-04
03_02_0834 - 11630288-11630500,11630531-11630623,11630844-116310... 37 0.015
05_04_0122 + 18198594-18202269,18202551-18202591,18203273-182032... 29 5.2
02_05_1302 + 35567585-35567848,35568303-35568368,35568475-355685... 28 9.1
02_02_0457 + 10503801-10507358 28 9.1
>01_06_0824 - 32243495-32244319,32244449-32244859
Length = 411
Score = 68.9 bits (161), Expect = 4e-12
Identities = 56/205 (27%), Positives = 94/205 (45%), Gaps = 9/205 (4%)
Frame = +3
Query: 159 DKSVILSAFSVMIPLAQLAIASTGESHDELLKAIDFPN--------DNVTKAVFTDLNQK 314
DK++ +S S+ LA L + GE+ D+++ + +V D +
Sbjct: 31 DKNLAVSPLSLHAALALLGAGARGETLDQIIAFLGPAGGPAHAALASHVALCSLADDSGP 90
Query: 315 VRSIKGVDLKLANKVYIANGNELNDQFAVVSRDVFNSEVQNLNF-GKNEEAANIINTWVE 491
G ++ AN V++ L +A V D + +E + ++F K EEA IN W E
Sbjct: 91 GDDRGGPKVRFANGVWVDAALRLKAAYARVVADKYRAEARPVSFRDKLEEARREINEWFE 150
Query: 492 EQTSKRIKNLVDSNSVGQ*HTSVSS*IAIYFKGSWKDKFDKELTQDRPFHVNKD*TIQVP 671
T+ RIK+ + ++V + +V A+YFKG W+ KFD T D F++ + P
Sbjct: 151 SATAGRIKDFLPKDAVDRATPAVLG-NALYFKGDWESKFDARSTSDDVFYLPDGGHVSAP 209
Query: 672 TMYKRGDFAYGESSELDAKLIELPY 746
M G + Y + K++ LPY
Sbjct: 210 FM-SSGKWQY-IACRAGYKVLRLPY 232
>03_05_0293 +
22849103-22849513,22849670-22849756,22850156-22850284,
22850507-22851262,22853474-22854250
Length = 719
Score = 60.9 bits (141), Expect = 1e-09
Identities = 37/100 (37%), Positives = 56/100 (56%)
Frame = +3
Query: 447 GKNEEAANIINTWVEEQTSKRIKNLVDSNSVGQ*HTSVSS*IAIYFKGSWKDKFDKELTQ 626
GK E A+ +N+WVE+ TS IK ++ SV T + A+YFKG+W +KFD T+
Sbjct: 208 GKAAEVASQVNSWVEKVTSGLIKEILPPGSVDH-TTRLVLGNALYFKGAWTEKFDASKTK 266
Query: 627 DRPFHVNKD*TIQVPTMYKRGDFAYGESSELDAKLIELPY 746
D FH+ ++Q P M Y S + + K+++LPY
Sbjct: 267 DGEFHLLDGKSVQAPFM-STSKKQYILSYD-NLKVLKLPY 304
Score = 60.1 bits (139), Expect = 2e-09
Identities = 34/97 (35%), Positives = 53/97 (54%)
Frame = +3
Query: 459 EAANIINTWVEEQTSKRIKNLVDSNSVGQ*HTSVSS*IAIYFKGSWKDKFDKELTQDRPF 638
E +N+WV+ TS IKN+ S+ +T + A+YFKG+W +KFD T+D F
Sbjct: 464 EVLGQVNSWVDRVTSGLIKNIATPRSINH-NTKLVLANALYFKGAWAEKFDVSKTEDGEF 522
Query: 639 HVNKD*TIQVPTMYKRGDFAYGESSELDAKLIELPYV 749
H+ ++Q P M R Y S + K+++LPY+
Sbjct: 523 HLLDGESVQAPFMSTRKK-QYLSSYD-SLKVLKLPYL 557
>11_02_0011 - 7337618-7338496,7338596-7338991
Length = 424
Score = 58.8 bits (136), Expect = 4e-09
Identities = 54/202 (26%), Positives = 91/202 (45%), Gaps = 6/202 (2%)
Frame = +3
Query: 159 DKSVILSAFSVMIPLAQLAIASTGESHDELLK-----AIDFPNDNVTKAVFTDLNQKVRS 323
+K+++ S S+ LA +A + G + DELL ++D ++V +AV L + S
Sbjct: 30 NKNLVFSPASLYAALALVAAGARGTTLDELLALLGAASLDDLEESVRRAVEVGLADESAS 89
Query: 324 IKGVDLKLANKVYIANGNELNDQFAVVSRDVFNSEVQNLNFGKN-EEAANIINTWVEEQT 500
G + A V+ EL + + + + + NF + + + IN WV + T
Sbjct: 90 -GGPRVSDACGVWHDETLELKPAYRAAAAGTYKAVTRAANFQRQPKRSRKKINKWVSKAT 148
Query: 501 SKRIKNLVDSNSVGQ*HTSVSS*IAIYFKGSWKDKFDKELTQDRPFHVNKD*TIQVPTMY 680
+K I ++ SV T++ AIYFKG W + F + T FH ++ VP M
Sbjct: 149 NKLIPEILPDGSVHV-DTALVLVNAIYFKGKWSNPFPRSSTTTGKFHRLDGSSVDVPFMS 207
Query: 681 KRGDFAYGESSELDAKLIELPY 746
R D G +++LPY
Sbjct: 208 SREDQYIGFHDGF--TVLKLPY 227
>11_01_0750 - 6315126-6315896,6316371-6316784
Length = 394
Score = 58.0 bits (134), Expect = 7e-09
Identities = 40/142 (28%), Positives = 75/142 (52%), Gaps = 3/142 (2%)
Frame = +3
Query: 330 GVDLKLANKVYIANGNELNDQFAVVSRDVFNSEVQNLNF-GKNEEAANIINTWVEEQTSK 506
G L A V+ L+ +F ++ +V+ S + +F K E+A + IN+WV++ T
Sbjct: 97 GPRLAFAGGVWADASRSLSPEFVGLAGNVYGSAAKKADFKNKPEDAPDQINSWVKDSTKG 156
Query: 507 RIKNLVDSNSVGQ*HTSVSS*IAIYFKGSWKDKFDKELTQDRPFHVNKD*TIQVPTM-YK 683
+ L+ + ++ Q +T + A+YF+G W D+ D T ++ F+ +++VP + Y
Sbjct: 157 TVTTLLPAGTIDQ-NTGLVLGSALYFRGRWLDRDDLRRTTEQKFYCLDGTSVEVPFVEYD 215
Query: 684 RGD-FAYGESSELDAKLIELPY 746
R FA + + K+I+LPY
Sbjct: 216 RTRLFAVHD----NFKVIKLPY 233
>01_01_1152 + 9170628-9171899
Length = 423
Score = 57.6 bits (133), Expect = 1e-08
Identities = 49/197 (24%), Positives = 89/197 (45%), Gaps = 2/197 (1%)
Frame = +3
Query: 162 KSVILSAFSVMIPLAQLAIASTGESHDELLKAIDFPN-DNVTKAVFTDLNQKVRSIKGVD 338
++ I+S S LA +A + GE+ ELL + P+ + ++ T L ++R +
Sbjct: 59 RNFIVSPLSFHAALALVADGARGETQRELLGFLGSPSLAELHRSPTTRLVARLRHLPNTS 118
Query: 339 LKLANKVYIANGNELNDQFAVVSRDVFNSEVQNLNFGKN-EEAANIINTWVEEQTSKRIK 515
A V++ G L +FA + + + + +F E+A +N +V + T I+
Sbjct: 119 F--ACGVWVDRGRALTPEFADAAASRYAAVAEPADFATQPEQARERVNAFVSDATEGLIR 176
Query: 516 NLVDSNSVGQ*HTSVSS*IAIYFKGSWKDKFDKELTQDRPFHVNKD*TIQVPTMYKRGDF 695
+++ NSV T V A++FKG+W F T PFH+ ++ P M F
Sbjct: 177 DVLPPNSVDS-STVVVLANAVHFKGTWSLPFHPSATFHAPFHLLDGGAVRAPFMTTEIPF 235
Query: 696 AYGESSELDAKLIELPY 746
++ ++LPY
Sbjct: 236 ERHVAAFPGFTALKLPY 252
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 54.4 bits (125), Expect = 9e-08
Identities = 54/201 (26%), Positives = 93/201 (46%), Gaps = 3/201 (1%)
Frame = +3
Query: 153 NPDKSVILSAFSVMIPLAQLAIASTGESHDELLKAIDFPNDNVTKAVFTDLNQKVRSIKG 332
N +++V+ S S+ LA +A + G + DEL+ + A DL + VR +
Sbjct: 28 NSNRNVVFSPVSLYAALALVASGARGTTLDELVALLG-------AASLDDLEESVR--RA 78
Query: 333 VDLKLANKVYIANGNELNDQFAVV--SRDVFNSEVQNLNFGKNEEAANI-INTWVEEQTS 503
V++ LA++ + G ++ V R + +F + +++ IN WV + T+
Sbjct: 79 VEVGLADESE-SGGPRVSYACGVWHDERLALKPAYRAADFQRQPKSSRKKINKWVSKATN 137
Query: 504 KRIKNLVDSNSVGQ*HTSVSS*IAIYFKGSWKDKFDKELTQDRPFHVNKD*TIQVPTMYK 683
K I+ ++ SV T++ AIYFKG W + F +E T FH ++ P M
Sbjct: 138 KLIREILPDGSVHG-GTALVLVNAIYFKGKWSNPFPRERTTTGKFHRLDGSSVDAPFMSS 196
Query: 684 RGDFAYGESSELDAKLIELPY 746
R D G K+++LPY
Sbjct: 197 REDQYIGFYDGF--KVLKLPY 215
>03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869
Length = 258
Score = 50.8 bits (116), Expect = 1e-06
Identities = 32/96 (33%), Positives = 50/96 (52%)
Frame = +3
Query: 459 EAANIINTWVEEQTSKRIKNLVDSNSVGQ*HTSVSS*IAIYFKGSWKDKFDKELTQDRPF 638
E A+ +N+WV+ TS IK ++ SV T + A+YFKG+W +KFD T+D F
Sbjct: 4 EVASQVNSWVDRVTSGLIKEILPPGSVDH-TTRLVLGNALYFKGAWTEKFDASKTKDGEF 62
Query: 639 HVNKD*TIQVPTMYKRGDFAYGESSELDAKLIELPY 746
+ ++ P M Y S + K+++LPY
Sbjct: 63 RLLDGKSVLAPFM-STSKKQYLSSYD-SLKVLKLPY 96
>11_01_0771 + 6453130-6454488
Length = 452
Score = 48.8 bits (111), Expect = 5e-06
Identities = 26/64 (40%), Positives = 35/64 (54%)
Frame = +3
Query: 450 KNEEAANIINTWVEEQTSKRIKNLVDSNSVGQ*HTSVSS*IAIYFKGSWKDKFDKELTQD 629
K EEA IN W T K I +++ SVG T+V AIYFKG W F++ T+
Sbjct: 169 KAEEARKQINAWARRATGKLITDVLPPRSVGP-ETAVVLGNAIYFKGKWDRPFNESDTER 227
Query: 630 RPFH 641
+PF+
Sbjct: 228 KPFY 231
>11_02_0014 - 7352619-7352918,7353173-7353418
Length = 181
Score = 47.2 bits (107), Expect = 1e-05
Identities = 32/91 (35%), Positives = 44/91 (48%)
Frame = +3
Query: 474 INTWVEEQTSKRIKNLVDSNSVGQ*HTSVSS*IAIYFKGSWKDKFDKELTQDRPFHVNKD 653
IN WV + T+K I ++ SV + T V AIYFKG W D F +E T FH
Sbjct: 90 INEWVSKATNKLIPEILPDGSVHRLTTLVLV-NAIYFKGKWSDPFPRESTTTGKFHRLDG 148
Query: 654 *TIQVPTMYKRGDFAYGESSELDAKLIELPY 746
++ V M R D G + +++LPY
Sbjct: 149 SSVNVRFMRSREDQYIGFYDGFN--VLKLPY 177
>11_01_0767 + 6438648-6438809,6439146-6440000
Length = 338
Score = 46.4 bits (105), Expect = 2e-05
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Frame = +3
Query: 459 EAANIINTWVEEQTSKRIKNLV--DSNSVGQ*HTSVSS*IAIYFKGSWKDKFDKELTQDR 632
EA IN WV T I ++ +S SV H + AIYFKG W FDK T +R
Sbjct: 57 EARKEINAWVARATKNLITEVIKPESQSVDTRHVVGN---AIYFKGEWLAPFDKSDTAER 113
Query: 633 PFHVNKD*TIQVPTMYKRGDFAYGESSELDAKLIELPY 746
F +++VP M + + + +++ LPY
Sbjct: 114 EFRRLDGSSVEVPFMQRPSGSYHHVACHDGFRVLRLPY 151
>04_04_0619 + 26652923-26653267,26653440-26654273
Length = 392
Score = 46.0 bits (104), Expect = 3e-05
Identities = 42/193 (21%), Positives = 81/193 (41%), Gaps = 1/193 (0%)
Frame = +3
Query: 171 ILSAFSVMIPLAQLAIASTGESHDELLKAIDFPNDNVTKAVFTDLNQKVRSIKGVDLKLA 350
+ S + LA LA + GE+ +LL + + + A L ++R+ L A
Sbjct: 23 MFSPLGLRAGLALLATGTDGETLRQLLAFLGSQHIHQLNAASAGLLAEMRAWP--QLSFA 80
Query: 351 NKVYIANGNELNDQFAVVSRDVFNSEVQNLNFGKNEEAANI-INTWVEEQTSKRIKNLVD 527
+++ L +F + + ++++F AA +N ++ + T+ R+ N +
Sbjct: 81 AGIFVDRSLRLRPEFQSTAAAAHGAFPRSVDFQNQANAAAAEVNRFISQATNGRLNNTIS 140
Query: 528 SNSVGQ*HTSVSS*IAIYFKGSWKDKFDKELTQDRPFHVNKD*TIQVPTMYKRGDFAYGE 707
+ G V + A++FK +W KF+ TQ R FH + VP +
Sbjct: 141 PGTFGSSTKCVLA-NAMHFKATWGRKFESYDTQRRRFHRQDGTRVTVPFLSDPRTHYAAR 199
Query: 708 SSELDAKLIELPY 746
L K+++L Y
Sbjct: 200 FDGLGFKVLQLFY 212
>05_06_0044 - 25150322-25151260
Length = 312
Score = 43.6 bits (98), Expect = 2e-04
Identities = 35/118 (29%), Positives = 53/118 (44%), Gaps = 11/118 (9%)
Frame = +3
Query: 357 VYIANGNELNDQFAVVSRDVFNSEVQNLNFGKNEEAANIINTWVEEQTSKRIKNLVDSNS 536
V++ LN FA + VF + V++ G A IN W QT +K+++ SNS
Sbjct: 3 VWVDASLRLNPAFADTAASVFKAAVRSA--GNPAAARAEINEWFSSQTGGFVKDIL-SNS 59
Query: 537 V-----------GQ*HTSVSS*IAIYFKGSWKDKFDKELTQDRPFHVNKD*TIQVPTM 677
+ G SV ++YF W F LT++ FHV+ D ++VP M
Sbjct: 60 IDDDDDGSGGGGGAISASVFLANSLYFNAYWDHPFFPHLTEEGDFHVSPDHDVRVPFM 117
>03_02_0834 -
11630288-11630500,11630531-11630623,11630844-11631050,
11631301-11633089,11633817-11634145
Length = 876
Score = 37.1 bits (82), Expect = 0.015
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Frame = +3
Query: 231 ESHDELLKAIDFPNDNVTKAVFTDLNQKVRSI--KGVDLKLANKVYIANGNELNDQFAVV 404
+ HD LLK+ NDN+TK + NQ + + KG D K +KV N+Q +
Sbjct: 467 KEHDTLLKSSVELNDNLTKTA-EERNQILECLKEKGGDNKALHKVIARLQRISNEQEKTI 525
Query: 405 S--RDVFNSEVQNLNFGKNEEAANI 473
+ R FN+E++N + G +E + +
Sbjct: 526 TGLRQGFNAELENKSLGTSESISRM 550
>05_04_0122 + 18198594-18202269,18202551-18202591,18203273-18203281,
18203336-18203551,18204257-18204361,18204761-18204919
Length = 1401
Score = 28.7 bits (61), Expect = 5.2
Identities = 22/53 (41%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = -2
Query: 496 CSST-QVLIMLAASSF--LPKFKFCTSELNTSLDTTAN*SFNSLPLAMYTLLA 347
C T L++L SF LP C S L SL+ T+N S SLP M L A
Sbjct: 1114 CQGTLTTLVILGCPSFSSLPASIRCLSNLK-SLELTSNNSLTSLPEGMQNLTA 1165
>02_05_1302 +
35567585-35567848,35568303-35568368,35568475-35568573,
35569028-35569061,35569147-35569246,35569738-35569813,
35569974-35570315,35570426-35570569,35570840-35571073,
35571149-35571212,35571297-35571340,35571431-35571601
Length = 545
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -2
Query: 109 FPFLSTLCGSMSLANVKAA-RANMVIIIFMLSVTFVF 2
FPFL T + +N+KAA +V ++F +SVT F
Sbjct: 190 FPFLMTRACCEACSNLKAAFLVAVVFLLFCMSVTLYF 226
>02_02_0457 + 10503801-10507358
Length = 1185
Score = 27.9 bits (59), Expect = 9.1
Identities = 20/67 (29%), Positives = 32/67 (47%)
Frame = -2
Query: 619 NSLSNLSFQLPLK*IAIYEDTLVCYCPTELESTKFLIRLLVCSSTQVLIMLAASSFLPKF 440
+SL L +L LK ++ +D +C+CP S K+ RL++ S+ Q L + P
Sbjct: 1049 SSLRTLPCEL-LKDFSVLKDLKICFCP----SLKWHRRLVLPSTLQRLSLTRCGDISPCV 1103
Query: 439 KFCTSEL 419
C L
Sbjct: 1104 PSCLENL 1110
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,461,068
Number of Sequences: 37544
Number of extensions: 332646
Number of successful extensions: 795
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 791
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1992480932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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