Samia BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_O18
         (537 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0910 - 7016932-7017759,7018059-7018351,7018952-7019390           29   2.3  
05_01_0383 + 2990812-2990855,2991364-2991463,2991554-2991622,299...    29   3.1  
03_05_0076 + 20545530-20545704,20545719-20545879                       28   4.1  
02_05_0528 - 29782382-29782864,29782994-29783092,29783319-297833...    27   7.2  
10_01_0127 - 1519803-1520036,1520802-1521095,1521840-1522614,152...    27   9.5  
08_01_0519 - 4518256-4519623,4520840-4521230,4521313-4521525,452...    27   9.5  
07_01_0559 + 4151054-4151178,4151306-4153018,4153121-4153412,415...    27   9.5  
04_03_0961 + 21263735-21263773,21264157-21264279,21266774-212668...    27   9.5  
03_06_0047 + 31266940-31268394                                         27   9.5  

>06_01_0910 - 7016932-7017759,7018059-7018351,7018952-7019390
          Length = 519

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = +3

Query: 366 AGNARKFKFVPFPACILVRGRSHTGAGIEK 455
           +GNAR+F+ +     +++R   H GA I+K
Sbjct: 444 SGNARRFEVLDVTKAMMLRADGHPGAAIDK 473


>05_01_0383 +
           2990812-2990855,2991364-2991463,2991554-2991622,
           2991724-2991960,2992045-2992228,2992307-2992442,
           2992529-2992691,2992958-2993108,2993154-2993278,
           2993349-2993504,2993792-2993860,2993951-2994019,
           2994127-2994264,2994626-2994773,2994856-2994866,
           2995212-2995352,2995441-2995569,2995860-2995899,
           2996020-2996348,2996902-2996919
          Length = 818

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
 Frame = +3

Query: 39  YTRYISDRRCAN--IRRNSAAVVMRVRKKLKTGLRIRRQDLPQPVPLVLREGPDAQRF 206
           Y  ++S R  AN   ++N  A+  RV+      +R  + DLP    L++REG +  RF
Sbjct: 508 YKNFVSQRSDANGWYQKNGVAL-FRVQGLKHDCIRAIQVDLPLKQSLLVREGSEPDRF 564


>03_05_0076 + 20545530-20545704,20545719-20545879
          Length = 111

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -1

Query: 399 MGQT*TSGHSPRCLKSSRDGANVREHS 319
           MG   + GH+P C  SS DG ++ +HS
Sbjct: 68  MGGGGSVGHNPCCFGSSGDGDDIYDHS 94


>02_05_0528 - 29782382-29782864,29782994-29783092,29783319-29783387,
            29783781-29783888,29783965-29784274,29784772-29784812,
            29784886-29784942,29785290-29785448,29785587-29785655,
            29785728-29785877,29785967-29786098,29786347-29786433,
            29786516-29786686,29786760-29786960,29787348-29787416,
            29787510-29787618,29787887-29788005,29788676-29788780,
            29789377-29789755,29790022-29790150,29790223-29790402,
            29791310-29791469,29791604-29791744,29791832-29792021,
            29792100-29792161,29792879-29793107
          Length = 1335

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = -2

Query: 278  QTGENMKVQTQGSASSHVPSFTIFKSLCVWS-LSQYKRHWLW*VLPSDPQTGLKFLA 111
            ++ E  K     S+ + VP+F+   S  +WS + ++ +H     +  D +TG K +A
Sbjct: 830  KSAEGQKSSLSASSKNIVPTFSHLTSDGIWSNIKEFAKHKYLFEVTDDAKTGAKRVA 886


>10_01_0127 -
           1519803-1520036,1520802-1521095,1521840-1522614,
           1524574-1525412
          Length = 713

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = +2

Query: 317 LECSRTLAPSLEDFKHRGEC 376
           ++C R +  SLE+++HRG C
Sbjct: 543 IKCDRGIYKSLENWQHRGAC 562


>08_01_0519 - 4518256-4519623,4520840-4521230,4521313-4521525,
            4521632-4521723,4522226-4522342,4522641-4522704,
            4523175-4523228,4523579-4523666,4523788-4524023,
            4525258-4525478,4525634-4525827,4525938-4525995,
            4526771-4526824,4526851-4527473,4527580-4527640,
            4528417-4528590,4528803-4529063,4529201-4529320,
            4529388-4530022,4530062-4530828,4530915-4531012,
            4531101-4531155,4531230-4531318
          Length = 2010

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -2

Query: 287  SVPQTGENMKVQTQGSASSHVPS 219
            S  Q G  M+ Q+QG ASS +PS
Sbjct: 1668 STVQNGSQMQQQSQGPASSAIPS 1690


>07_01_0559 +
           4151054-4151178,4151306-4153018,4153121-4153412,
           4154327-4154636,4155041-4155261
          Length = 886

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 10/16 (62%), Positives = 14/16 (87%)
 Frame = +1

Query: 175 YCERDQTHSDLKIVKE 222
           YCER+QT +DL+IV +
Sbjct: 784 YCEREQTMTDLQIVTQ 799


>04_03_0961 +
           21263735-21263773,21264157-21264279,21266774-21266847,
           21266939-21267095,21267554-21267694,21267739-21267823,
           21268810-21268903,21269041-21269239,21269515-21269549,
           21270076-21270631,21270722-21270882,21271704-21271718,
           21273078-21273330,21273439-21273562,21273688-21273788,
           21274870-21274938,21275060-21275191,21275270-21275404,
           21275489-21275551,21275636-21275881,21276007-21276285
          Length = 1026

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 13/40 (32%), Positives = 17/40 (42%)
 Frame = +1

Query: 154 YHNQCLLYCERDQTHSDLKIVKEGTCEEADPCVCTFIFSP 273
           +HN    Y        + KI K  TC +   C C  IF+P
Sbjct: 770 WHNVAAKYLSLKSEVDEEKINKLHTCVDYGTCSCRHIFTP 809


>03_06_0047 + 31266940-31268394
          Length = 484

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 14/49 (28%), Positives = 22/49 (44%)
 Frame = +1

Query: 115 RNLRPVCGSDGKTYHNQCLLYCERDQTHSDLKIVKEGTCEEADPCVCTF 261
           R +   C  D  TY     ++CE D+    LK+ K    ++  P + TF
Sbjct: 368 RRMIKCCQPDCDTYTMMIKMFCENDKVEMALKVWKYMRLKQFLPSMHTF 416


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,878,515
Number of Sequences: 37544
Number of extensions: 348588
Number of successful extensions: 928
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 907
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 927
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1186491600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)